| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 780,556 | A→C | 5.2% | intergenic (‑86/+36) | PP_0670 ← / ← glyA‑II | bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 780,556 | 0 | A | C | 5.2% | 292.7 / 3.6 | 91 | intergenic (‑86/+36) | PP_0670/glyA‑II | bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (46/40); new base C (3/2); total (49/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCAGTACGGCGGCGAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATCCAGCCGGCC > NC_002947/780413‑780703 | ccAGTACGGCGGCGAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGGCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGACCGGCACTggg > 3:135075/1‑149 (MQ=255) cAGTACGGCGGCGAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGc < 2:369070/149‑1 (MQ=255) cggcggCGAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAATTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCggg < 8:15096/148‑1 (MQ=255) ggcgAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCATAGGGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCtt < 4:327399/149‑1 (MQ=255) ggcgAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCCCAGTGCCGGGCTCtt < 8:33738/149‑1 (MQ=255) aGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACt < 2:400491/149‑1 (MQ=255) gATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTcgtttaa < 3:90349/148‑7 (MQ=255) gATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAg > 7:56626/1‑149 (MQ=255) ggggATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAgg > 7:100540/1‑147 (MQ=255) gggATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTa > 4:170408/1‑144 (MQ=255) gggATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTa < 3:170408/144‑1 (MQ=255) ggATCTGCCGGGTTTCGACTTGCTCTCTGCTCAAGGTGCGGCCTCTGCAAAGTGGAGGTATTGGCGGCTCAGTCATTGTACGAGGGGCGGAGCGCCTGTATTAAACGAAAGAGCCCGGCACTTGGCCGGGCTCTTTCCCTATAGGCaac > 6:213377/1‑148 (MQ=255) gATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTa > 6:387200/1‑142 (MQ=255) gATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTa < 5:387200/142‑1 (MQ=255) ccGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAGgcg < 8:100540/144‑1 (MQ=255) ccGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAAt < 6:211204/149‑1 (MQ=255) gggTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAAt > 6:118563/1‑147 (MQ=255) gAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGcc < 6:174215/148‑1 (MQ=255) gAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCg > 2:353440/1‑149 (MQ=255) aGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCg > 8:318340/1‑148 (MQ=255) gTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGt > 2:113649/1‑148 (MQ=255) gCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTaaa < 5:118563/148‑1 (MQ=255) tctGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCgg > 7:276773/1‑148 (MQ=255) ctGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCgg > 2:198544/1‑147 (MQ=255) tGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGc < 1:113649/147‑1 (MQ=255) tGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAg > 6:397750/1‑149 (MQ=255) gTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGc < 7:318340/148‑1 (MQ=255) tCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTaaa > 2:359967/1‑139 (MQ=255) tCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTaaa < 1:359967/139‑1 (MQ=255) tCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGctt < 1:353440/149‑1 (MQ=255) aaGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGcttc < 8:56626/148‑1 (MQ=255) gTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTg > 3:302213/1‑148 (MQ=255) gTGCGGCCTGTGCAAAGTCGAGGTATTGGGGGCGCAGTCATTGTACGAGGCCCGGTGCGCCTGTATTAAACGAAAGAGCACGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCACTTTCCGTAAAACGGCAGCATCTTg > 6:355304/1‑148 (MQ=255) gCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTa < 3:17018/106‑1 (MQ=255) gCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTa > 4:17018/1‑106 (MQ=255) gCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTg > 2:393549/1‑146 (MQ=255) cGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAg > 5:245019/1‑148 (MQ=255) cGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGa < 6:245019/149‑1 (MQ=255) gCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGAt > 1:76403/1‑148 (MQ=255) gCCTGTGCAAAGTGGAGCTATTGGGGGCGCAGACTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCAATTTAGGCAAGCGCCAATCAGATGCCGTAAACCAGCAGCTTCTTGCAGATg > 1:177999/1‑149 (MQ=255) cTGTGCAAAGTGGAGGTATTGGGGGTGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGc > 5:26538/1‑149 (MQ=255) cTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGc > 7:112492/1‑149 (MQ=255) tgCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGcc < 7:53074/147‑1 (MQ=255) tgCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGACCt < 2:76403/148‑1 (MQ=255) cAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGa < 1:393549/149‑1 (MQ=255) aaaGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGATCTTTCAATTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGAAGATTCTTAAAGATGGCATTGa > 6:355899/1‑148 (MQ=255) gtggtgGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCtt < 5:355899/149‑1 (MQ=255) gTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCtt < 5:264930/149‑1 (MQ=255) gAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCtt > 2:84611/1‑140 (MQ=255) gAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCtt < 1:84611/140‑1 (MQ=255) gTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCacg > 2:183912/1‑149 (MQ=255) ttGGGGGTGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCacgga < 6:26538/148‑1 (MQ=255) ttGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCacggac > 5:79446/1‑149 (MQ=255) gcgcAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTc > 7:292289/1‑149 (MQ=255) tctgtatttGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGATCTTTCACTTTATGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACTGCGTCg < 6:254014/142‑1 (MQ=255) aGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATc < 4:302213/149‑1 (MQ=255) tCTTTGTACGAGGGGCGGTGAGACTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTAACTTTAGGCAAGCGCCAATCAATTGCCGTAAACCGGCAGCTTCTTGAAGATGGACTTGACATTATCACGGAATGCGTCGaaga > 5:254014/1‑145 (MQ=255) tttGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCg > 5:195851/1‑149 (MQ=255) gTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCtt > 1:291900/1‑149 (MQ=255) cGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCgt < 8:276773/149‑1 (MQ=255) gggCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTCCTCACGGACGGCGTCGATCACCGCTTCgttgtt > 6:409183/1‑149 (MQ=255) ggCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTc < 1:183912/149‑1 (MQ=255) cgcCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCg < 4:135075/148‑1 (MQ=255) ccTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCg > 3:14124/1‑134 (MQ=255) ccTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCg < 4:14124/134‑1 (MQ=255) gTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCtt < 8:30547/97‑1 (MQ=255) gTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCtt > 7:30547/1‑97 (MQ=255) tATTAAACGATAGAGCCCGGCACTGGTCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGTTGGCCTTTACCTTGTCACGGACGGCGTCGATCAGCGCTTCGTTGTTCAGGTCGGCCAGGa < 5:213377/149‑1 (MQ=255) tATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGGGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAgg < 5:355304/148‑1 (MQ=255) tATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGa > 7:206189/1‑149 (MQ=255) aTTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTtct > 6:194081/1‑103 (MQ=255) ttAACCGAAAGAGCCCGGCACTGGGCCGGACTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTACACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGTCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATg > 1:379025/1‑149 (MQ=255) tAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGAt < 5:235739/117‑1 (MQ=255) tAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGAt > 6:235739/1‑117 (MQ=255) aaCGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTc < 6:195851/148‑1 (MQ=255) gtgAAAGAGCCCGGCCCAGTGCCGGGCTCTTTCGCTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGt > 7:265169/3‑134 (MQ=39) gtgAAAGAGCCCGGCCCAGTGCCGGGCTCTTTCGCTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGt < 8:265169/132‑1 (MQ=39) gAAAGAGCCCGGCACTGGGCCGGGCTCTTTGACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCg > 1:35111/1‑146 (MQ=255) gAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAg < 8:292289/149‑1 (MQ=255) aaaGAGCCCGGCCCAGTGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCg > 2:219885/1‑145 (MQ=255) aaaGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGa < 2:35111/149‑1 (MQ=255) aaGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCg > 5:107584/1‑144 (MQ=255) agagCCCGGCACTGTGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGAt > 8:344302/1‑148 (MQ=255) agagCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATc > 2:71595/1‑149 (MQ=255) agagCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATc < 5:397750/149‑1 (MQ=255) agagCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATc > 1:101874/1‑149 (MQ=255) agCCCGGCCCAGTGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCGTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATc > 1:356788/1‑147 (MQ=255) agCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATc > 2:241397/1‑147 (MQ=255) cccGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATCCAGc > 8:100967/1‑149 (MQ=255) cACTGTGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATCCAGCCGGcc < 7:344302/149‑1 (MQ=255) cACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATCCAGCCGGc > 6:85129/1‑148 (MQ=255) | CCAGTACGGCGGCGAAGTAGATGGGGATCTGCCGGGTTTCGAGTTGCTCTCTGGTCAAGGTGCGGCCTGTGCAAAGTGGAGGTATTGGGGGCGCAGTCTTTGTACGAGGGGCGGTGCGCCTGTATTAAACGAAAGAGCCCGGCACTGGGCCGGGCTCTTTCACTTTAGGCAAGCGCCAATCAGTTGCCGTAAACCGGCAGCTTCTTGCAGATGGCCTTGACCTTCTCACGGACGGCGTCGATCACCGCTTCGTTGTTCAGGTCGGCCAGGATGTCGCAGATCCAGCCGGCC > NC_002947/780413‑780703 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |