Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 801,358 | C→T | 5.4% | intergenic (+31/‑158) | rpmA → / → obg | 50S ribosomal protein L27/GTPase Obg |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 801,358 | 0 | C | T | 5.4% | 281.4 / 3.4 | 93 | intergenic (+31/‑158) | rpmA/obg | 50S ribosomal protein L27/GTPase Obg |
Reads supporting (aligned to +/- strand): ref base C (42/45); new base T (2/3); total (45/48) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-02 |
GGCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGC > NC_002947/801211‑801497 | ggCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGc > 7:232059/1‑148 (MQ=255) ggCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGACCCGTCATGc > 3:148584/1‑148 (MQ=255) gCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGa < 8:53761/149‑1 (MQ=255) ggCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACgggg < 1:375752/149‑1 (MQ=255) gTTGGTATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCtt > 5:301830/1‑149 (MQ=255) gTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAATGCGTGATCAAGTTCGAGAAGAAAGCCGATTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATCCGACGCGGCtt > 6:179866/1‑149 (MQ=255) ggCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCGCATGACGGGGCttct < 4:131554/148‑3 (MQ=255) ggCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCtttt < 2:232355/148‑1 (MQ=255) gCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCttttt < 3:16897/148‑1 (MQ=255) gCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTc > 1:177604/1‑149 (MQ=255) gCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTc > 2:179494/1‑149 (MQ=255) gCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAACGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCGCATGACGGGGCttctg < 2:329817/148‑4 (MQ=255) cATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCg > 4:297515/1‑149 (MQ=255) cATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCg > 6:5535/1‑149 (MQ=255) aTGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGt < 5:46894/149‑1 (MQ=255) gggCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCAGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGttt > 4:10994/1‑149 (MQ=255) ggCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGttt < 2:166696/148‑1 (MQ=255) gCAAGGACCACACCTTGTTCGCCAAGTTCGAAGGCGTGATCAAGTTCGAGCAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgt < 4:260552/149‑1 (MQ=255) gCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgt > 4:274967/1‑149 (MQ=255) cAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 2:185402/149‑1 (MQ=255) cAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 5:164702/149‑1 (MQ=255) ccACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 8:286169/143‑1 (MQ=255) ccACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg > 7:286169/1‑143 (MQ=255) ccACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGc > 4:103517/1‑149 (MQ=255) cacaCCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGcc > 1:287330/1‑149 (MQ=255) cacaCCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGcc > 5:350485/1‑149 (MQ=255) acacCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCct > 3:26321/1‑149 (MQ=255) cacCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCctc < 8:232059/149‑1 (MQ=255) acCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCctct > 5:289468/1‑149 (MQ=255) cTTGTTCTCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTg < 5:5535/149‑1 (MQ=255) gTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGc < 3:297515/147‑1 (MQ=255) gTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCa < 4:354135/148‑1 (MQ=255) ttCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGTGCCTCTTGCaaa < 1:237196/149‑1 (MQ=255) ttCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCaaa < 3:103517/149‑1 (MQ=255) gCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCt > 8:67432/1‑149 (MQ=255) ccAAGATCGAAGGCGTGTTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCg < 5:134472/123‑1 (MQ=255) ccAAGATCGAAGGCGTGTTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCg > 6:134472/1‑123 (MQ=255) ccAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTg > 7:9477/1‑149 (MQ=255) cAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGt > 4:139302/1‑149 (MQ=255) cAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGt < 3:274967/149‑1 (MQ=255) aaGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGtt > 5:278306/1‑149 (MQ=255) aGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGttt < 2:287330/149‑1 (MQ=255) aGGCGTGATCAATTTCGAGAAAAAACGCGATTTCAATCGCCGTTACGTGATCATAGTCGCCGCTTAATAGCGACGTCGCCAATCATAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCt < 1:325472/148‑1 (MQ=255) aGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTgg < 4:21683/148‑1 (MQ=255) gATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCg > 6:102819/1‑149 (MQ=255) aTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCTCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATTCGACGGGGCTTTTTCGTTTGTGTTGAGACTCTTGCAAAGCTGTTTGTCTGGGTTGCCg < 4:148584/148‑1 (MQ=255) aaGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGt < 5:126057/149‑1 (MQ=255) agaagaAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGGGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTc > 8:362369/1‑149 (MQ=255) agaagaAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTc < 7:67432/149‑1 (MQ=255) gaaAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACg > 3:180719/1‑149 (MQ=255) gaaAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACg > 2:346865/1‑149 (MQ=255) gAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACAGGGCTTTTTCGTTTGTGGTGAGCCTCTAGCAAAGCTGGTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTAc > 1:328426/1‑149 (MQ=255) gTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCgcgc < 1:346865/149‑1 (MQ=255) gTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCgcgc < 2:177604/149‑1 (MQ=255) gTGAGCATCGTCGCGGCTTAATCGCGCGGTCGC‑‑GCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTCCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGTTTTCTACGGTCGTACGGGGccgccg < 6:293079/141‑1 (MQ=255) gTGAGCATCGTCGCCGCTTACTCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCCCCGGGGCTTTATCGGTTGTGGTGAGCCTCTTGCAAAGCTGTTGTACTGGGTTGCCGGCGTTGGTTTCTACGGTCGTCCGGGGccgccg > 5:293079/1‑141 (MQ=255) gTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAtt > 3:219614/1‑149 (MQ=255) tGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGc < 5:84727/110‑1 (MQ=255) tGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGc > 6:84727/1‑110 (MQ=255) gAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAtttt > 8:214972/1‑149 (MQ=255) gAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttt > 4:265499/1‑148 (MQ=255) gAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttt < 3:265499/148‑1 (MQ=255) aGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGGTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt < 3:10994/149‑1 (MQ=255) tcgtcgCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTc > 3:201880/1‑139 (MQ=255) tcgtcgCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTc < 4:201880/139‑1 (MQ=255) tcgtcgCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGc > 5:308379/1‑147 (MQ=255) tcgCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCCGCGTTGGTTTCAACGGTAGTAAGGGGCCGCCGCGCTCATTTTTGCAagac > 6:264947/1‑148 (MQ=255) cgccgcTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGc > 3:341114/1‑149 (MQ=255) cgccgcTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGc < 7:214972/149‑1 (MQ=255) ccgcTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCt < 1:179494/149‑1 (MQ=255) ccgcTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCt > 3:43926/1‑149 (MQ=255) cgcTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTc < 1:247716/149‑1 (MQ=255) ttAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATg > 1:260472/1‑149 (MQ=255) aaTCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGtt > 1:397704/1‑149 (MQ=255) aaTCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGtt > 3:390657/1‑149 (MQ=255) aaTCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGt < 8:9477/148‑1 (MQ=255) aaTCGCGACGTCAC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGt < 1:389794/148‑1 (MQ=255) gcgACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGttttt < 2:397704/148‑1 (MQ=255) cgACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGa < 6:301830/149‑1 (MQ=255) cgACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGa < 6:350485/149‑1 (MQ=255) aCGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGt < 6:289468/149‑1 (MQ=255) cGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCAtt > 3:337954/1‑149 (MQ=255) gC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTc < 4:219614/149‑1 (MQ=255) tCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTAGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAg > 7:282329/1‑149 (MQ=255) gaaaaaGCCCCGTCGCATGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGc < 5:369590/116‑1 (MQ=255) gaaaaaGCCCCGTCGCATGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGACGCGCTCATTTTTGCAAGAGACTCATGTTTTTGAGTCATTCAg > 7:251469/5‑148 (MQ=255) gaaaaaGCCCCGTCGCATGAAGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGc > 6:369590/5‑120 (MQ=255) cAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGc > 4:38660/1‑148 (MQ=255) cAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGc < 6:278306/148‑1 (MQ=255) aaGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGt > 7:36987/1‑149 (MQ=255) cccGTCATGCGACGGGGCTTTTTCTTTTGTGGTGAGCCTCTTGCAAAGCTTTTTGTCTGGGTTTCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTGATTTTTTCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGc < 5:179866/149‑1 (MQ=255) ccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt < 3:316247/109‑1 (MQ=255) ccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt > 4:316247/1‑109 (MQ=255) cGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGt > 3:342326/1‑131 (MQ=255) cGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGt < 4:342326/131‑1 (MQ=255) | GGCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGC‑‑TCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGC > NC_002947/801211‑801497 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |