| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 85,104 | G→A | 11.9% | intergenic (+82/+48) | aroE → / ← PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 85,104 | 0 | G | A | 11.9% | 179.4 / 11.4 | 67 | intergenic (+82/+48) | aroE/PP_0075 | shikimate 5‑dehydrogenase/choline sulfate transporter |
| Reads supporting (aligned to +/- strand): ref base G (27/32); new base A (3/5); total (30/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
GTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCC > NC_002947/84958‑85250 | gtggcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACgg < 3:266377/149‑1 (MQ=17) gcgtgAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCCATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGc < 1:402169/148‑1 (MQ=21) gcgtgAGGCCGGATACGGCGCCGGGGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGc < 8:193123/148‑1 (MQ=21) aGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTTGCAGCCC‑ATCGCGACGCAAGGCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGt < 6:236394/149‑1 (MQ=17) ggCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGCTCCTCTGTGGGAGCGGCCTTGCGt > 1:307746/1‑149 (MQ=255) gCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTc < 5:303268/149‑1 (MQ=255) gATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGa > 1:126993/1‑149 (MQ=255) aTACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTcgc < 2:109235/146‑1 (MQ=255) aTACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTcgc > 1:109235/1‑146 (MQ=255) cGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGACGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATggg < 5:32518/149‑1 (MQ=255) ccGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTTTGGGAGCGGCCTTGCGTCGCGATGGGCTGCa < 1:41178/149‑1 (MQ=255) cGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCtt < 7:203202/130‑1 (MQ=255) gtgtTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAg < 6:179470/149‑1 (MQ=255) gtgtTGGCGGAACTGCGCCGGCAACTCGCGCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTAGCGCGACGCACGGCCGTTCCCACAACGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAg < 8:192639/149‑1 (MQ=39) ttGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAg > 8:183549/1‑146 (MQ=255) ggCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGc > 8:295268/1‑125 (MQ=255) ggCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGc < 7:295268/125‑1 (MQ=255) aCTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGCTCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGaa > 1:378229/1‑149 (MQ=255) gcgcCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATcc > 5:165375/1‑149 (MQ=255) cGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAAc < 6:165375/149‑1 (MQ=255) aaCGCGCGCGGGGCGGCGCGGGCCGGGGCCGCTTGGCGGCCCTATCGCGCCCCAAGGCCGTTCCCACAACCAA‑CGGCGTACGCCGATCCGCTGGGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCa < 1:165237/149‑1 (MQ=37) aCTCGCTCGGGGCTGAGGTGGCCTGGGCCGGTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAATGTA‑TGTCGTACGCCTATCCTCTGTGGTTGGGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATGCCAACCTCAt < 6:167101/149‑1 (MQ=255) ctcgcgcgGGGCTGAGGTGGCGGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCTTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGTAGCGGCCTTGGGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCAtt < 2:120340/149‑1 (MQ=39) tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTc > 8:316235/1‑149 (MQ=255) tcgctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTc > 3:258954/1‑149 (MQ=255) gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTc < 3:65279/143‑1 (MQ=255) gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTc > 4:65279/1‑143 (MQ=255) gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTc < 7:183549/147‑1 (MQ=255) gctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCt > 5:157605/1‑149 (MQ=255) gctcgGGGCTGAGCTGGCCGGGGCCGCTTGACGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑AGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTcc > 1:242453/1‑148 (MQ=255) ctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCt > 5:371416/1‑148 (MQ=255) ctcgGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCCTTCCCACAAAATA‑CGTCGTACGCCGATACTCTGTGGGAGCGGCCGTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATACCAACCAAATTcca > 6:231650/1‑147 (MQ=38) ggggCTGAGCTGGCCGGGGCCGCTTGGGGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCaaa < 5:231650/149‑1 (MQ=255) ggggCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAGCCAGACCCAGAATCCCAACCTCATTCCTCaa < 1:237112/149‑1 (MQ=255) gCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGca > 3:358261/1‑149 (MQ=255) gcggcCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCt < 2:378229/148‑1 (MQ=255) cccTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAg < 6:371416/149‑1 (MQ=255) tCGCGACGCAAGCCCGTTCCCACAAAGTC‑CGTCGAACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCt < 5:268219/149‑1 (MQ=255) gACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCaa > 3:377223/1‑149 (MQ=255) aCGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAAc < 4:358261/149‑1 (MQ=255) ggCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCg < 4:377223/149‑1 (MQ=255) gCCGCTCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCACCCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGa > 3:264793/1‑149 (MQ=21) ccGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGGAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGAt < 4:258954/149‑1 (MQ=255) cgctCCCACAGAGGATCGGCGTACGACG‑TACTTTGTGGGAACGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGAt > 5:22914/4‑148 (MQ=21) ccACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCt < 6:157605/148‑1 (MQ=255) cacaAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAccc < 5:145549/117‑1 (MQ=255) cacaAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCAccc > 6:145549/1‑117 (MQ=255) gtccgccgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTg < 2:307746/143‑1 (MQ=255) cgtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCgg > 8:315312/1‑149 (MQ=255) gtACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGt < 1:22713/149‑1 (MQ=255) tACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTg > 4:38895/1‑149 (MQ=255) gCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGc > 1:163126/1‑147 (MQ=255) gCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGc > 5:44881/1‑147 (MQ=255) aTCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTc < 2:126993/149‑1 (MQ=255) tCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTc > 8:201768/1‑148 (MQ=255) ctttgtgGGAACGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCaaa < 2:5034/146‑1 (MQ=255) tctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTg > 7:281607/1‑130 (MQ=255) tctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTg < 8:281607/130‑1 (MQ=255) tctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAAc > 2:269646/1‑149 (MQ=255) ctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc < 4:93119/105‑1 (MQ=255) ctGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGc > 3:93119/1‑105 (MQ=255) tgtgGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAAc < 7:315312/147‑1 (MQ=255) tgggggAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAAc < 7:316235/144‑1 (MQ=255) gtgGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTcc > 5:379101/1‑149 (MQ=255) ggAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTcccc < 2:242453/148‑1 (MQ=255) ggAACGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTccccc > 5:40442/1‑149 (MQ=255) gAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTcccccc > 4:372503/1‑149 (MQ=255) | GTGGCGTGAGGCCGGATACGGCGCCGGTGTTGGCTGAACTGCGCCGGCAACTCGCTCGGGGCTGAGCTGGCCGGGGCCGCTTGGCGGCCCTATCGCGACGCAAGGCCGTTCCCACAAAGTA‑CGTCGTACGCCGATCCTCTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCAAAG‑CAGACCCAGAATCCCAACCTCATTCCTCAAACCGGATCGGGCACAACTCCACCCCTTCCAGCTTCTGCAACTCCTCGATCACCTGCGGCCTGGCCCGGTGCAAGGTCAAACTCCCCCC > NC_002947/84958‑85250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |