| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 86,240 | G→T | 5.2% | L160M (CTG→ATG) | PP_0075 ← | choline sulfate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 86,240 | 0 | G | T | 5.2% | 249.4 / 3.3 | 77 | L160M (CTG→ATG) | PP_0075 | choline sulfate transporter |
| Reads supporting (aligned to +/- strand): ref base G (34/39); new base T (2/2); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.78e-01 | |||||||||||
AACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATGCCGCCGAGG > NC_002947/86092‑86388 | aaCAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAACAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAg > 5:281930/1‑149 (MQ=255) aCAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAgg > 7:420/1‑149 (MQ=255) aCAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAgg < 1:380605/149‑1 (MQ=255) aCAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAgg < 1:386674/149‑1 (MQ=255) cAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAggg < 7:233872/149‑1 (MQ=255) cAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAggg < 2:93136/149‑1 (MQ=255) aGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGACCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGc > 1:53325/1‑149 (MQ=255) ggCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGcc < 5:312183/149‑1 (MQ=255) ggCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGcc < 3:107184/149‑1 (MQ=255) gCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGcc > 8:237577/1‑148 (MQ=255) aGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCcag > 1:154493/1‑148 (MQ=255) aGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCcag > 6:42636/1‑148 (MQ=255) gCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCATGGCCCTGccagcca < 3:289176/149‑6 (MQ=255) gCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCATGGCCCTGCCcagcc < 5:110674/149‑2 (MQ=255) gCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCcagca < 8:420/149‑1 (MQ=255) gcCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTggg > 2:244424/1‑148 (MQ=255) gcCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGt < 7:278368/149‑1 (MQ=255) cAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCC‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAg > 6:199237/1‑149 (MQ=255) gTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTgg < 3:219087/149‑1 (MQ=255) aaGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCaa < 4:362959/149‑1 (MQ=255) gCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGc < 8:374233/149‑1 (MQ=255) gCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTTGCTGGGCAgg < 8:307347/111‑1 (MQ=255) gCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAgg > 7:307347/1‑111 (MQ=255) gATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGa < 6:127731/149‑1 (MQ=255) cACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATgg > 2:27264/1‑149 (MQ=255) acgacgGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCaa < 4:290394/139‑1 (MQ=255) acgacgGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCaa > 3:290394/1‑139 (MQ=255) acgacgGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATggc > 8:93021/1‑149 (MQ=255) acgacgGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATggc < 8:245132/149‑1 (MQ=255) gacgGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATggcgg > 1:342666/1‑149 (MQ=255) gggCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCAccc < 4:286958/148‑1 (MQ=255) ccAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGc < 5:199237/149‑1 (MQ=255) ggCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAgg < 1:146201/89‑1 (MQ=255) ggCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAgg > 2:146201/1‑89 (MQ=255) gCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTg > 3:17613/1‑148 (MQ=255) ccAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCGAGTGGCCTGGCTGGGCAGGGCCATGCCcagca < 1:42260/100‑1 (MQ=255) ccAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCcagca > 2:42260/1‑99 (MQ=255) ccAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCAGGCTGGGCAGGGCCATGCCAAGCAGGTTGGGTAGCTGGCCCAAGGCAATGAAGATGGCGGCACCCAGCGTGAAg > 1:266256/1‑149 (MQ=255) ccAGCAGCAAGGAAGGGAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAg < 5:251990/149‑1 (MQ=255) agcagcAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGcc < 1:27264/149‑1 (MQ=255) agcagcAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGcc < 6:147681/149‑1 (MQ=255) caacaAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGa < 6:281930/146‑1 (MQ=255) ggaaggTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCAAGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGcacaa > 6:201464/1‑147 (MQ=255) gtaggtCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGaa > 2:254286/1‑149 (MQ=255) ggtCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATgg < 2:53325/149‑1 (MQ=255) gtCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATgg > 6:124625/1‑148 (MQ=255) tCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATgg > 4:391103/1‑147 (MQ=255) tCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGga < 5:124625/149‑1 (MQ=255) tCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGga < 6:150882/149‑1 (MQ=255) tCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGga < 4:355263/149‑1 (MQ=255) tCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGga < 1:163267/149‑1 (MQ=255) gACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGgag < 2:154493/148‑1 (MQ=255) cTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAg > 8:92372/1‑94 (MQ=255) cTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAg < 7:92372/94‑1 (MQ=255) cGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACg > 5:163528/1‑134 (MQ=255) cGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACg < 6:163528/134‑1 (MQ=255) ccTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAg > 5:22218/1‑125 (MQ=255) ccTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAg < 6:22218/125‑1 (MQ=255) cTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGTAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑Gtt > 7:328049/1‑148 (MQ=255) cGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGAc < 5:180640/148‑1 (MQ=255) gcCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGcc > 1:321741/1‑149 (MQ=255) ccAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGcc > 1:53999/1‑148 (MQ=255) ccAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTAGa < 3:365867/138‑1 (MQ=255) ccAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTAGa > 4:365867/1‑138 (MQ=255) gTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAgc < 4:393509/149‑1 (MQ=255) tCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAgcg < 3:391103/149‑1 (MQ=255) cTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAgcgc < 2:342666/148‑1 (MQ=255) tGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCaa > 5:334706/1‑149 (MQ=255) ggTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGcc > 4:7378/1‑149 (MQ=255) tcatcaGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCg > 8:261514/1‑149 (MQ=255) atcaGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAACGTTGACCAGCGCGCCGAAGCGCAATAGCCCGa < 1:254286/149‑1 (MQ=255) tcaGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGag > 1:85828/1‑148 (MQ=255) aGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGagcag > 7:316802/1‑149 (MQ=255) gcgcG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGagcag > 8:327719/1‑148 (MQ=255) gcgcG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGagcag > 4:316193/1‑148 (MQ=255) cgcg‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATa > 7:201105/1‑137 (MQ=255) cgcg‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATa < 8:201105/137‑1 (MQ=255) gCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGaa < 5:50473/149‑1 (MQ=255) tggctggGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAAt > 5:329874/1‑149 (MQ=255) tgctggGCATGGCCCTGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCTCCCAGCGTGAAGCCGAGCACAACGGAATGGGAGACGAA‑GTTGCCCAGCGCGCGGACGCGCAATAGCCCGAGCAGCTGCTGGAAAATg > 3:285820/2‑149 (MQ=255) gctggGCAGGGCCATTCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCATCGTTAAGCCGAGCACCACGGAATGTGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATg < 5:201464/148‑1 (MQ=255) gctggGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGTCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGACGAGCACCACGGAATGGGAGAAGAA‑GTTGACCATCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAAt < 2:266256/147‑1 (MQ=255) gctggGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATgc < 7:93021/149‑1 (MQ=255) ggCATGGCCCTGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATgccgcc > 1:176497/1‑149 (MQ=255) gCAGGGGCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATgccgcc > 8:53966/1‑148 (MQ=255) cAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATGCCGCCGa < 7:237577/149‑1 (MQ=255) cAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATGCCGCCGa < 3:7378/149‑1 (MQ=255) gggCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATGCCGCCGAgg < 4:17613/149‑1 (MQ=255) | AACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGCACGGTCATCAGCGCG‑GTGGCCTGGCTGGGCAGGGCCATGCCCAGCAGGTTGGGTAGCTGGCCCAAGGCAATGACGATGGCGGCACCCAGCGTGAAGCCGAGCACCACGGAATGGGAGACGAA‑GTTGACCAGCGCGCCGAAGCGCAATAGCCCGAGCAGCAGCTGGAAAATGCCGCCGAGG > NC_002947/86092‑86388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |