| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 875,283 | A→C | 6.9% | intergenic (+22/+24) | PP_0759 → / ← PP_0760 | hypothetical protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 875,283 | 0 | A | C | 6.9% | 313.9 / 10.8 | 102 | intergenic (+22/+24) | PP_0759/PP_0760 | hypothetical protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (53/42); new base C (2/5); total (55/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.00e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
CAAGGCTTCCGAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGCCGCGAAG > NC_002947/875135‑875424 | cAAGGCTTCCGAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCa < 8:372104/149‑1 (MQ=255) ggCTTCCGAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCAt < 5:26129/147‑1 (MQ=255) ggCTTCCGAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATgg > 6:269601/1‑149 (MQ=255) gAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCCATGCAGcccc < 8:327397/149‑1 (MQ=255) gAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGcccc > 8:302722/1‑149 (MQ=255) gAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGcccc > 6:158050/1‑149 (MQ=255) aaGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCCATGCAGcccca < 1:213787/149‑2 (MQ=255) aaGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCCATGCAGcccca < 6:418590/149‑2 (MQ=255) aaGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCa > 1:366677/1‑143 (MQ=255) aaGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCa < 2:366677/143‑1 (MQ=255) gTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCCATGCAGccccagga < 5:130534/149‑5 (MQ=255) tGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCgg > 5:103203/1‑149 (MQ=255) gCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGt > 2:124576/1‑149 (MQ=255) aCCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGttt > 3:202748/1‑149 (MQ=255) ccGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGAGGCGATTCCGAAGGTGATGCCGATGTATCAGGCTGCAGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGAATGGCAGCCCCCCCGGtttt > 3:354583/1‑149 (MQ=255) ttCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTcc > 2:284714/1‑142 (MQ=255) ttCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTcc < 1:284714/142‑1 (MQ=255) ttCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAc‑c > 3:89700/1‑149 (MQ=255) ttCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAc‑c < 7:309538/149‑1 (MQ=255) tCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGtt < 6:370276/137‑1 (MQ=255) tCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGtt > 5:370276/1‑137 (MQ=255) aTGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCaa > 1:202532/1‑149 (MQ=255) gAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATc > 5:323426/1‑149 (MQ=255) gAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATc > 3:120948/1‑149 (MQ=255) tACTCACCCGGCGTCGGCGAGCCGGATTGCTTCGCTGCAGGCGGGGATTCCGAAGGTGATGCCGCTGTATCAGGCTGGCGCCAAGCCGTAAATGCCTGTATCCTGGGGCTGGATGGCAGCGCCCCCGGTTTTCCCTTTAC‑CCAATCCa < 7:273166/148‑1 (MQ=255) tCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCa > 6:351171/1‑149 (MQ=255) aCCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTcc > 1:375757/1‑129 (MQ=255) aCCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTcc < 2:375757/129‑1 (MQ=255) aCCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACt > 8:317538/1‑149 (MQ=255) aCCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACt > 3:350492/1‑149 (MQ=255) ccGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTgg > 6:97977/1‑149 (MQ=255) cGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGc > 1:118421/1‑149 (MQ=255) gCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCt < 5:158050/149‑1 (MQ=255) cGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCtt < 1:124576/149‑1 (MQ=255) cGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGGTTTCCCTTTAC‑CCAATCCAGCCACTGGCCtt > 1:404965/1‑149 (MQ=255) gcgAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCa > 7:123836/1‑146 (MQ=255) gcgAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCa < 8:123836/146‑1 (MQ=255) cgAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGc < 5:97977/149‑1 (MQ=255) gAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGcc < 4:202748/149‑1 (MQ=255) gAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGcc > 2:308127/1‑149 (MQ=255) gAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGcc < 4:89700/149‑1 (MQ=255) ccGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGaa < 4:120948/149‑1 (MQ=255) cGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAAt < 7:302722/149‑1 (MQ=255) gCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAc‑c > 6:284368/1‑118 (MQ=255) gCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAc‑c < 5:284368/118‑1 (MQ=255) gCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGaa > 7:13438/1‑147 (MQ=255) cATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGaa > 4:250364/1‑146 (MQ=255) cATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAg < 6:103203/149‑1 (MQ=255) cTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGc > 3:355792/1‑149 (MQ=255) ttCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCCATGCAGccccagg > 8:130069/1‑93 (MQ=255) ttCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCCATGCAGccccagg < 7:130069/96‑4 (MQ=255) ttCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGcc > 3:113653/1‑149 (MQ=255) ttCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGcc > 2:280368/1‑149 (MQ=255) ttCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGc > 4:382800/1‑148 (MQ=255) tGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGAt > 7:161190/1‑149 (MQ=255) tGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGCCCACGAt > 8:320658/1‑149 (MQ=255) tGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAAACCAGCCACTGGCATTCATTGCCGAATAGACGGCAACGAt > 7:149922/1‑149 (MQ=255) gctgcgATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCCGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCa < 3:81602/146‑1 (MQ=255) gcggcgATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCCGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCa < 3:87062/149‑1 (MQ=255) ggcgATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGACGTAAATGCCTGAATCATGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACCGCCACGATTGCCAg > 8:105254/1‑148 (MQ=255) gATTCCTAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCCCGATTGCCAGTAc > 7:187773/1‑148 (MQ=255) aTTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACg > 3:260566/1‑148 (MQ=255) ccGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACgaag < 6:323426/148‑1 (MQ=255) cGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTGAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACgaagaa > 7:347557/1‑149 (MQ=255) cGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACgaagaa < 7:59435/149‑1 (MQ=255) gAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAAc < 5:269601/149‑1 (MQ=255) gAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAAc > 3:287903/1‑149 (MQ=255) aGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGc < 4:287903/149‑1 (MQ=255) gCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTgccgc > 1:298015/1‑148 (MQ=255) cTGTATCAGGCTGCCGCCAAGCCGTGAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCa < 8:347557/149‑1 (MQ=255) cTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCa < 4:350492/149‑1 (MQ=255) tGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATCGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAg > 8:308774/1‑149 (MQ=255) tATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGCGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAg < 5:351171/147‑1 (MQ=255) tCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAggcgg < 4:113653/149‑1 (MQ=255) tCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAggcgg < 2:202532/149‑1 (MQ=255) ggCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCATTGCCGCCAGGCGGCGa < 2:118421/149‑1 (MQ=255) gCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGaa > 6:193245/1‑149 (MQ=255) ccgccAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCa < 8:161190/148‑1 (MQ=255) cgccAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGc > 7:338443/1‑149 (MQ=255) cgccAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGc < 4:322729/149‑1 (MQ=255) cgccAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGc < 8:13438/149‑1 (MQ=255) ccAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATa > 1:189909/1‑92 (MQ=255) ccAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATa < 2:189909/92‑1 (MQ=255) gCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAAc < 7:320658/149‑1 (MQ=255) ccGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACg > 7:360446/1‑149 (MQ=255) cGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTACGCCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACg > 1:309354/1‑149 (MQ=255) cGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACgg > 2:143566/1‑149 (MQ=255) tAAATGCCTGAATCGTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCa < 7:105254/149‑1 (MQ=255) aaaGGCCTCAAGCCTGGGGCGCCAGGCCACCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCa < 2:404965/148‑1 (MQ=255) cTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTc > 3:211235/1‑149 (MQ=255) tGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGGGTCAACGGCAGTTTGTcg > 6:5796/1‑148 (MQ=255) tGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAgacaaact > 3:79375/1‑142 (MQ=255) aaTCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCt < 3:250364/147‑1 (MQ=255) aTCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGcc < 4:211235/149‑1 (MQ=255) ggggggCTGCCATGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGCcgc > 2:249745/3‑148 (MQ=255) tGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGCcgcg > 6:326527/1‑148 (MQ=255) gggCTGCATGGCAGCCCCGCCGGGTTTCCCTTTAC‑CCAATCCAGCCACTGTCCTTCATTGCCGTATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGCCGCGaa < 8:149922/148‑1 (MQ=255) gggCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTCCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGCCGCGAAg > 3:163186/1‑149 (MQ=255) cTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAAt < 6:258770/63‑1 (MQ=255) cTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAAt > 5:258770/1‑63 (MQ=255) | CAAGGCTTCCGAAGGTGCACCGCCTGAGTTCATGAGTACTCACCCGGCGTCCGCGAGCCGCATTGCTTCGCTGCAGGCGGCGATTCCGAAGGTGATGCCGCTGTATCAGGCTGCCGCCAAGCCGTAAATGCCTGAATCCTGGGGCTGCATGGCAGCCCCCCCGGTTTTCCCTTTAC‑CCAATCCAGCCACTGGCCTTCATTGCCGAATAGACGGCCACGATTGCCAGTACGAAGAACGCCGTTGCCGCCAGGCGGCGAATCAGCGTCAACGGCAGTTTGTCTGCCGCGAAG > NC_002947/875135‑875424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |