| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 889,448 | G→T | 9.8% | intergenic (+185/‑9) | PP_0769 → / → PP_0770 | sensor histidine kinase/PemI‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 889,448 | 0 | G | T | 9.8% | 168.4 / 7.3 | 58 | intergenic (+185/‑9) | PP_0769/PP_0770 | sensor histidine kinase/PemI‑like protein |
| Reads supporting (aligned to +/- strand): ref base G (27/24); new base T (2/4); total (30/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
GGAGAGTGGCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGTCAG > NC_002947/889300‑889596 | ggAGAGTGGCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTggg > 7:148209/1‑149 (MQ=255) gagaGGGGCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGga < 1:91532/149‑1 (MQ=255) tgagTTGCTTCGCATGGTGATGTAGGTCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTGAGGGCAGATGACAGTGTATATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGgag < 6:123559/148‑1 (MQ=255) agTGGCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGAt < 8:137791/149‑1 (MQ=255) gCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTc < 4:193405/149‑1 (MQ=255) gCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTCGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTc < 1:60310/149‑1 (MQ=255) cTTCCCATGGTGATGTCTGGCATTTCCTTGTTGTGGTTGCAGGGCTTTTGTTCTGTCAGGGCTGTTTAAATTGTTTATACCATGTTTCTACATTTTGCTTTCAATCATTGGTTGGGTTTCTACTAAGTATCTCCCAAGGTAGATAcata < 7:255685/149‑4 (MQ=255) cTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTCCCAAGGTAGATAcata < 3:284814/149‑4 (MQ=255) cccAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATg < 1:102390/148‑1 (MQ=255) ccAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTCCCAAGGTAGATAcatagtag < 6:30360/149‑8 (MQ=255) aGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGAt < 5:306002/149‑1 (MQ=255) ggTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCATGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTAGCTTGGGAGATACTCATGCAGATc < 8:34295/149‑1 (MQ=255) tGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGa > 4:186640/1‑148 (MQ=255) aGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTc > 8:146995/1‑148 (MQ=255) gggCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTCCCAAGGTAGATAca > 3:380658/1‑129 (MQ=255) gggCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTCCCAAGGTAGATAca < 4:380658/130‑2 (MQ=255) gggCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCaa > 3:183462/1‑149 (MQ=255) ggCATTTCCTTCTTGAGGTTGCATGTCTTTTGTTCGTTCAGGGCATATGACAGTTTAGATACGACGTTTCTACATTTCGCTTGGAATCATTTGGAGGGTTTCTACTATGTATCTACCTTTGGAGATACTCATGCAGATAAAGATTaaa < 4:210852/148‑1 (MQ=255) ggCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCaa > 5:135995/1‑148 (MQ=255) ggCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCaa > 8:178370/1‑148 (MQ=255) aTTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGt > 5:414762/1‑149 (MQ=255) tttCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTg < 5:292875/149‑1 (MQ=255) ccTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTggg < 6:414762/148‑1 (MQ=255) ttGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCaa > 4:25418/1‑147 (MQ=255) aGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGAAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGAt > 8:25531/1‑149 (MQ=255) tGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTg < 3:186640/148‑1 (MQ=255) ttCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGccc > 3:133131/1‑149 (MQ=255) ggCAGATGACAGTGTAGATAAGACTTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTa > 8:45303/1‑149 (MQ=255) cAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTATCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTAc > 2:198329/1‑148 (MQ=255) gATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCa < 4:133131/149‑1 (MQ=255) tGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCaa < 7:146995/148‑1 (MQ=255) tgtAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATg < 4:190797/149‑1 (MQ=255) tgtAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATg > 1:132917/1‑149 (MQ=255) tAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATgc < 6:117438/148‑1 (MQ=255) aTACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCt > 6:349664/1‑149 (MQ=255) tACGACGTTTCTACATTTCGCTTGCAATTATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTc > 4:255542/1‑149 (MQ=255) cgaagTTTCTACATTTCGCTTGCAATTATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCgg < 3:255542/149‑1 (MQ=255) gacgTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTg > 6:100611/1‑116 (MQ=255) gacgTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTg < 5:100611/116‑1 (MQ=255) cgTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGgtgt < 8:148209/149‑1 (MQ=255) gTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTc < 7:25531/149‑1 (MQ=255) tttCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCg > 6:402827/1‑149 (MQ=255) aCATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCACGCAGATGCGCCTCGGTGTCGGCTcc > 7:380669/1‑149 (MQ=255) aTTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCAc > 7:74215/1‑149 (MQ=255) cGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCt > 5:394827/1‑148 (MQ=255) cTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTc < 5:80480/129‑1 (MQ=255) cTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTc > 6:80480/1‑129 (MQ=255) cAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCtt < 2:132917/149‑1 (MQ=255) aTCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGa > 4:131164/1‑149 (MQ=255) aTTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGacac > 8:160877/1‑149 (MQ=255) aTTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGaca > 7:101881/1‑148 (MQ=255) ttttCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTga < 7:375792/148‑1 (MQ=255) gTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTga < 2:175536/149‑1 (MQ=255) gTTTCTACTATGTATCTACCTTGGCAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCCCCGCAGTACTCAAGCAGATGCGACTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACAGGTg > 3:312933/1‑148 (MQ=255) tactaTGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGa < 1:198329/149‑1 (MQ=255) atgagTATCTCCCAAGGTAGATACTCATGCAGATCAAGATTCAACAGTGGTGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCACCACCCTGAGCCTTGACACAACGGGTGAGACGATg > 8:161818/5‑149 (MQ=255) tACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCaaa > 4:249584/1‑149 (MQ=255) aCCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACg < 4:373794/127‑1 (MQ=255) aCCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACg > 3:373794/1‑127 (MQ=255) ccTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAAcc > 1:114462/1‑149 (MQ=255) ttGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCg > 1:398205/1‑149 (MQ=255) gggAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGt < 3:249584/148‑1 (MQ=255) ggAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGt > 7:232919/1‑147 (MQ=255) ggAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGTc < 3:131164/148‑1 (MQ=255) ggAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGTc < 6:230406/148‑1 (MQ=255) gagaTACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGTCAg < 5:402827/149‑1 (MQ=255) | GGAGAGTGGCTTCCCAAGGTGATGTAGGGCATTTCCTTCTTGAGGTTGCAGGGCTTTTGTTCGGTCAGGGCAGATGACAGTGTAGATACGACGTTTCTACATTTCGCTTGCAATCATTGGGAGGGTTTCTACTATGTATCTACCTTGGGAGATACTCATGCAGATCAAGATTCAACAGTGGGGCAACAGCGCCGCGATCCGCTTGCCCGCCGCAGTACTCAAGCAGATGCGCCTCGGTGTCGGCTCCACCCTGAGCCTTGACACAACGGGTGAGACGATGGTGCTCAAACCCGTCAG > NC_002947/889300‑889596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |