| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 971,678 | A→T | 6.8% | intergenic (+33/‑31) | yajC → / → secD | protein translocase subunit YajC/protein translocase subunit SecD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 971,678 | 0 | A | T | 6.8% | 213.8 / 5.1 | 73 | intergenic (+33/‑31) | yajC/secD | protein translocase subunit YajC/protein translocase subunit SecD |
| Reads supporting (aligned to +/- strand): ref base A (32/36); new base T (2/3); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
AAGGTTTCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGAT > NC_002947/971535‑971818 | aaGGTTTCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGTTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGTTTTTATTTTCCAGTCGGGGCGCGCAAcgcg < 5:408624/149‑1 (MQ=255) aGGTTTCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACgcgc < 8:78873/149‑1 (MQ=255) tttCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGcccc < 5:216500/149‑1 (MQ=255) tttCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGcccc < 6:402317/149‑1 (MQ=255) tttCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGcccc > 1:258294/1‑149 (MQ=255) cGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGt > 8:285321/1‑149 (MQ=255) gATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTc > 5:235363/1‑149 (MQ=255) gATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGAACGCTCAAGGCTATCTGAGTTACCGGTTTAATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTc < 1:350291/149‑1 (MQ=255) aTGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCTAGGCTATCTGAGTTACCGGTTTTATTTTCCTGTCGGGGCGCGCAACGCGCCCCGCGTCt < 1:225400/149‑1 (MQ=255) tGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCt < 8:19975/148‑1 (MQ=255) ggAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGa > 2:59661/1‑149 (MQ=255) gAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGAt < 2:120580/149‑1 (MQ=255) gAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGAt > 4:202057/1‑149 (MQ=255) gAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGAt > 3:230637/1‑149 (MQ=255) gAAGGGTCCGACACTGTAGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCAAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGAt < 4:233115/149‑1 (MQ=255) aaGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATg < 1:59661/149‑1 (MQ=255) gtgtCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCt < 1:57245/149‑1 (MQ=255) gtgtCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCt < 1:6693/149‑1 (MQ=255) tCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGaa > 2:69286/1‑149 (MQ=255) tCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGaa > 5:222128/1‑149 (MQ=255) tCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGaa < 2:258294/149‑1 (MQ=255) cGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAAc > 8:279056/1‑148 (MQ=255) cTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAatat < 1:69286/149‑1 (MQ=255) tGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATc > 1:186830/1‑149 (MQ=255) gAGCTTAAGTGCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAACGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCCCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCctct < 4:230637/149‑1 (MQ=255) aGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCtg > 1:44340/1‑149 (MQ=255) cTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCtgtg > 7:221140/1‑149 (MQ=255) tGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCtgtg > 1:134208/1‑148 (MQ=255) aaGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCtgtg < 7:260523/146‑1 (MQ=255) aaGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCGGTGGaa > 8:355340/1‑149 (MQ=255) aGTTCCATATGGGTGCCATTGCTGCTACCCTGCAAAAAGGTAGGCTCAAGGCTATCTCAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGaa < 6:26997/148‑1 (MQ=255) gTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGaaa > 4:67294/1‑148 (MQ=255) ccAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAatat < 3:67294/148‑1 (MQ=255) ccAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAatat < 5:128507/148‑1 (MQ=255) ccATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTg < 7:279056/149‑1 (MQ=255) ttGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTg < 2:134208/149‑1 (MQ=255) ctgcGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTa > 6:194153/1‑149 (MQ=255) ccTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCATGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACtggtgg > 7:264359/1‑149 (MQ=255) ccAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCg < 5:106931/148‑1 (MQ=255) caaaaaGGTACGCCCACGCCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCg < 8:139295/146‑1 (MQ=255) aaaacGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCTGGCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGt < 2:186830/148‑1 (MQ=255) aaaGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGtt > 2:291716/1‑148 (MQ=255) aGGTACGCTCAAGGCTATGTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACtggtg < 7:201184/139‑1 (MQ=255) aGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACtggtg > 8:201184/1‑139 (MQ=255) aGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCa < 4:67257/149‑1 (MQ=255) ggTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCAt < 8:221140/149‑1 (MQ=255) cgcgCATGGGTATGTGAGTTACCGGTTTTTTTTACCAGTCGGGGCGCGAAACGAGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATAAGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTAt < 6:235363/149‑1 (MQ=255) cGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCATCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTa < 5:177946/148‑1 (MQ=255) aaGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTcc < 5:194153/147‑1 (MQ=255) cTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTcc > 5:58067/1‑148 (MQ=255) tCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAAc > 7:284291/1‑149 (MQ=255) gAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAAc < 1:368922/146‑1 (MQ=255) gAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAAc > 2:368922/1‑146 (MQ=255) aGTTACCGGTTTTATTTTCCAGGCGTGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACATATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGTTGGTCGGTTTCATTTATTCCGCTCCCAAc < 8:264359/145‑1 (MQ=255) ttACCGGTTTTATTTTCCAGTCGGGGCGTGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTAc > 5:327639/1‑149 (MQ=255) cGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCg > 6:116678/1‑148 (MQ=255) ggTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGa > 2:54616/1‑149 (MQ=255) ggTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGa < 7:285321/149‑1 (MQ=255) ttttATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCGTTTATTCCGCTCCCAACCTCTACCCGGAt > 1:38721/1‑148 (MQ=255) ttttATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATg > 6:129639/1‑149 (MQ=255) ttttATTTTCCAGTCGGGGAGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGGCGGTTTCATTTATTCCGCTCCCAACCTCTACACGGAt > 5:193071/1‑148 (MQ=255) aTTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGAccc > 1:16672/1‑149 (MQ=255) cAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCcggcgg < 6:222128/148‑1 (MQ=255) cAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGAACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCcggcgg < 2:44340/148‑1 (MQ=255) aGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa < 2:104867/149‑1 (MQ=255) ggggCGCGTTGCGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa < 3:23179/145‑1 (MQ=255) ggggCGCGTTGCGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa > 4:23179/1‑145 (MQ=255) ggggCGCGTTGCGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa > 4:236495/1‑145 (MQ=255) gggCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa > 2:46212/1‑144 (MQ=255) gggCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGAt < 3:202057/149‑1 (MQ=255) gggCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACACGGATGACCCGGCGGTACAGa > 4:360683/1‑148 (MQ=255) gcgcAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTAc > 3:89850/1‑141 (MQ=255) gcgcAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTAc < 4:89850/141‑1 (MQ=255) | AAGGTTTCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGAT > NC_002947/971535‑971818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |