| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 983,584 | A→T | 8.0% | intergenic (+42/‑47) | iscX → / → ndk | cysteine desulfurase activity regulator/nucleoside diphosphate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 983,584 | 0 | A | T | 8.0% | 244.8 / 9.0 | 87 | intergenic (+42/‑47) | iscX/ndk | cysteine desulfurase activity regulator/nucleoside diphosphate kinase |
| Reads supporting (aligned to +/- strand): ref base A (40/40); new base T (2/5); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
CACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCT > NC_002947/983438‑983725 | cACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATaa < 2:86291/148‑1 (MQ=255)cACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAAt > 2:34490/1‑149 (MQ=255)cACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAAt > 2:28397/1‑149 (MQ=255) cGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTcg > 1:392828/1‑149 (MQ=255) ggTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCgg < 3:238782/147‑1 (MQ=255) ggTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGAATTATACGCggg < 5:209671/148‑1 (MQ=255) gTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTGCCAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGt < 1:282971/149‑1 (MQ=255) actcTGGCAATGCCTGAGTTCAGCGACGATTCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGt > 1:237347/4‑149 (MQ=255) tGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGAATTATACGCGGGttc < 1:43327/149‑2 (MQ=255) tGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑AAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGtt > 7:149670/1‑148 (MQ=255) cTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTaa < 7:159734/149‑1 (MQ=255) gctttGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGAATTATACGCGGGttccgg < 1:33379/144‑5 (MQ=255) gCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGAATTATACGCGGGttccgg < 8:37446/147‑5 (MQ=255) gCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGAATTATACGCGGGttccgg < 1:81180/147‑5 (MQ=255) gCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCg < 2:126004/148‑1 (MQ=255) cAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCgg > 5:261580/1‑133 (MQ=255) cAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCgg < 6:261580/133‑1 (MQ=255) cAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTaa < 6:283832/149‑1 (MQ=255) gTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCTGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAacac < 4:105034/148‑1 (MQ=255) cAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCa > 6:271416/1‑148 (MQ=255) aGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCata > 2:357633/1‑149 (MQ=255) cgacga‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATAtt > 7:63058/1‑149 (MQ=255) cga‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTg < 1:303112/149‑1 (MQ=255) a‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa < 3:346284/149‑1 (MQ=255) a‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa < 6:122004/149‑1 (MQ=255) a‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa < 6:226602/149‑1 (MQ=255) tCCTTCACTCGGCGGTGATAAAGTGCTCTTGGCAATCCAGGCCGCCTGTATGGAGTAAGCGGACTATGCTTCACTTG‑AAGGTTAGGCAATCCCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa < 1:320142/149‑1 (MQ=255) cGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGt < 8:278114/148‑1 (MQ=255) cGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGt < 8:192891/148‑1 (MQ=255) gTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGttt > 6:31103/1‑149 (MQ=255) tCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGtttt > 1:268729/1‑149 (MQ=255) cACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGa > 7:179117/1‑143 (MQ=255) gcggcgGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCAt < 6:218608/149‑1 (MQ=255) ggcggTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATgg < 1:151748/149‑1 (MQ=255) gcggTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGc < 1:357633/149‑1 (MQ=255) gTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGt < 7:363240/149‑1 (MQ=255) aaaGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTNATATTCTGGAGTTTTCCATGGCTGTTCAAc < 1:34490/149‑1 (MQ=255) aaaGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAAc < 1:28397/149‑1 (MQ=255) cTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACt < 2:392828/148‑1 (MQ=255) tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACttt > 5:372800/1‑149 (MQ=255) tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACttt > 1:182817/1‑149 (MQ=255) tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACttt > 6:70999/1‑149 (MQ=255) tCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACtt > 8:191174/1‑148 (MQ=255) gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCGCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAGCACTCATATTCTGGAGTTTTCCATGGCTGTTCAGCGTACTTtct > 4:368843/1‑149 (MQ=255) gAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtct > 2:115440/1‑149 (MQ=255) aGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc < 7:246200/149‑1 (MQ=255) aGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc < 2:300302/149‑1 (MQ=255) aGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTtctc < 2:184189/149‑1 (MQ=255) cAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCcat < 5:307228/149‑1 (MQ=255) aGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCatcatc > 6:97162/1‑147 (MQ=255) aGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCatcatc > 2:74402/1‑147 (MQ=255) aGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCaa < 2:237347/149‑1 (MQ=255) aGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCaa < 5:31103/149‑1 (MQ=255) gccgccTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTc > 7:87714/1‑98 (MQ=255) gccgccTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTc < 8:87714/98‑1 (MQ=255) cTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTg < 3:44814/117‑1 (MQ=255) cTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTg > 4:44814/1‑117 (MQ=255) tGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACg > 3:368258/1‑149 (MQ=255) ggATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGc > 1:381745/1‑149 (MQ=255) ggATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGc > 4:351403/1‑149 (MQ=255) aTCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTg > 3:97396/1‑149 (MQ=255) gacgaAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTAc > 7:317247/1‑120 (MQ=255) gacgaAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTAc < 8:317247/120‑1 (MQ=255) acgaAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGc > 4:387516/1‑149 (MQ=255) acgaAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGc > 6:358161/1‑149 (MQ=255) aaGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCa > 4:123160/1‑148 (MQ=255) cGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAAc < 5:97162/149‑1 (MQ=255) gACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACg > 5:232800/1‑149 (MQ=255) gACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACg < 5:358161/149‑1 (MQ=255) aCTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGt > 2:246989/1‑149 (MQ=255) aCTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGt < 5:271416/149‑1 (MQ=255) gTCACTTG‑GAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGc < 8:149670/149‑1 (MQ=255) g‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATca > 2:362200/1‑149 (MQ=255) cAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATcac < 2:268729/149‑1 (MQ=255) tgTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATcacca < 5:190879/148‑1 (MQ=255) ggTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATcacca < 3:123160/149‑1 (MQ=255) cAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCtt > 1:319367/1‑149 (MQ=255) cAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCtt < 4:368258/149‑1 (MQ=255) ccccGGAACCCGCGTATAATTCGCAGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCATGAAGCTGTTGCCAAAAACGTCATAGGCAAGATAACCACTCGCTTCtaa > 7:187989/1‑148 (MQ=255) ccGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCgaagaa < 3:351403/149‑1 (MQ=255) ttaaaCCCGCGAATTATACGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGaagaag > 5:254936/4‑149 (MQ=255) ggAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGc < 6:232800/149‑1 (MQ=255) aaaCCCGCGAATTATACGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGcc > 8:227558/2‑149 (MQ=255) ccGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGcc > 5:167999/1‑149 (MQ=255) cgcgTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCt > 5:5910/1‑149 (MQ=255) agcgTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCt > 6:118853/2‑149 (MQ=255) gcgTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCt > 3:135413/1‑148 (MQ=255) gcgTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTACATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGTCAAGATCACCACTCGCTTCGAAGAAGCCGGCCt > 4:107819/1‑148 (MQ=255) | CACCGCTGGGTGCTGGCATTGCCAGAGTTCAGCGACGA‑TCCGTCACGCGGCGGTGAGAAAGTGCTCGAGGCAATCCAGGCCGCCTGGATCGACGAAGCCGACTAAGCGTCACTTG‑CAGGTTAGGCAAT‑CCCCCGGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGTAACACTCATATTCTGGAGTTTTCCATGGCTGTTCAACGTACTTTCTCCATCATCAAGCCTGACGCTGTTGCCAAAAACGTCATCGGCAAGATCACCACTCGCTTCGAAGAAGCCGGCCT > NC_002947/983438‑983725 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |