BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,054,462	A→C	8.8%	M1G (GTG→GGG) †‡	PP_0912 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,054,462	0	A	C	8.8%	294.2 / 13.5	102	M1G (GTG→GGG) †‡	PP_0912	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (46/46); new base C (4/5); total (51/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 104 total aligned reads displayed.

TGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCG  >  NC_002947/1054315‑1054607

tGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGca                                                                                                                                                   >  6:419279/1‑148 (MQ=255)

  gACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTTCATCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGcac                                                                                                                                                  <  4:247873/147‑1 (MQ=255)

  gACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACaa                                                                                                                                                <  6:116219/149‑1 (MQ=255)

     gATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGc                                                                                                                                             >  6:235890/1‑149 (MQ=255)

          ggCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCggg                                                                                                                                         <  8:350522/148‑1 (MQ=255)

          ggCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc                                                                                                                                        <  6:299808/149‑1 (MQ=255)

          ggCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc                                                                                                                                        <  7:32754/149‑1 (MQ=255)

          ggCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGCCCTACAGGATGAGCATATGCGTGCACGACAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAATGCCGGGc                                                                                                                                        >  3:49661/1‑149 (MQ=255)

           gCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCg                                                                                                                                       >  8:150987/1‑149 (MQ=255)

            ccTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGt                                                                                                                                      <  6:37550/149‑1 (MQ=255)

             cTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGtt                                                                                                                                     >  2:13345/1‑149 (MQ=255)

             cTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGtt                                                                                                                                     >  2:14966/1‑149 (MQ=255)

             cTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGtt                                                                                                                                     >  4:161256/1‑149 (MQ=255)

                cGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGttt                                                                                                                                    <  1:149663/147‑1 (MQ=255)

                cGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTg                                                                                                                                   <  2:294868/148‑1 (MQ=255)

                   cccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGTTTTCgtt                                                                                                                               <  8:41535/149‑3 (MQ=255)

                    ccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTg                                                                                                                              <  8:202714/149‑1 (MQ=255)

                      aGACATCAAGAATCTGCAGCACTGTTCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATTATCATCTGCGTGCACGCCAGGCAGCGGGAAGCTTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGTCGTTTGCGGTGaa                                                                                                                            <  6:326918/149‑1 (MQ=255)

                       gACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc                                                                                                                                        <  7:7579/136‑1 (MQ=255)

                       gACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGc                                                                                                                                        >  8:7579/1‑136 (MQ=255)

                       gACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAg                                                                                                                           <  1:14966/149‑1 (MQ=255)

                       gACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAg                                                                                                                           <  1:13345/149‑1 (MQ=255)

                        aCATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGttttc                                                                                                                                  >  1:22135/1‑139 (MQ=255)

                        aCATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGttttc                                                                                                                                  <  2:22135/141‑3 (MQ=255)

                         cATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAgcg                                                                                                                         <  5:419279/149‑1 (MQ=255)

                          aTCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATAGAAGGCCTACAGGATGAGCATCTGCGTGCACGACAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAgcgc                                                                                                                        >  2:62328/1‑149 (MQ=255)

                             aaGAATCTGCAGCACTGTGCCTCCTGTTAGGTATTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa                                                                                                                      >  1:49331/1‑149 (MQ=255)

                             aaGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGTTTTCgttt                                                                                                                              >  2:340366/1‑137 (MQ=255)

                             aaGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGTTTTCgttt                                                                                                                              <  1:340366/140‑4 (MQ=255)

                             aaGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa                                                                                                                      >  8:270250/1‑148 (MQ=255)

                             aaGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa                                                                                                                      >  7:326486/1‑148 (MQ=255)

                                 aTCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGAACGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTAcag                                                                                                                   >  4:111231/1‑147 (MQ=255)

                                     gcagcaCTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGtttt                                                                                                                                   <  7:30853/127‑2 (MQ=255)

                                     gcagcaCTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCCTTGTGCCGGGCGtttt                                                                                                                                   >  8:30853/1‑126 (MQ=255)

                                      cagcaCTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAgcg                                                                                                                         >  8:234365/1‑136 (MQ=255)

                                          aCTGTGCCTCGTGTTCGGT‑TTGATCGACGGCCTACTGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAACCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGaa                                                                                                        <  8:141644/149‑1 (MQ=255)

                                              tgCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTc                                                                                                     <  3:161256/148‑1 (MQ=255)

                                              tgCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTc                                                                                                     <  5:235890/148‑1 (MQ=255)

                                              tgCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCg                                                                                                    <  5:139648/149‑1 (MQ=255)

                                               gCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGt                                                                                                   >  2:314009/1‑149 (MQ=255)

                                                  tcctGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGaa                                                                                                                            <  6:42305/121‑1 (MQ=255)

                                                  tcctGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGaa                                                                                                                            >  5:42305/1‑121 (MQ=255)

                                                      gTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCg                                                                                             >  2:323306/1‑148 (MQ=255)

                                                       ttAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCg                                                                                             >  5:299105/1‑147 (MQ=255)

                                                       ttAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCa                                                                                           <  7:197895/149‑1 (MQ=255)

                                                           gT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCa                                                                                           <  7:51527/145‑1 (MQ=255)

                                                           gT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCa                                                                                           >  8:51527/1‑145 (MQ=255)

                                                                 aTCGAAGGCGTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGTAGCGGTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTGTGCGGTGAAGCGCAACAGCAGGATCAGAACACGTGATCCGCAGTGGCCggg                                                                                  >  2:285974/1‑149 (MQ=255)

                                                                 aTCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCggg                                                                                  <  7:150987/149‑1 (MQ=255)

                                                                 aTCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCggg                                                                                  >  5:381553/1‑149 (MQ=255)

                                                                 aTCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCgg                                                                                   <  8:326486/148‑1 (MQ=255)

                                                                  tCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGt                                                                                 >  7:43910/1‑149 (MQ=255)

                                                                  tCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCAAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGt                                                                                 >  3:394051/1‑149 (MQ=255)

                                                                     aaGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGtt                                                                                >  7:17188/1‑147 (MQ=255)

                                                                     aaGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGtt                                                                                >  7:372055/1‑147 (MQ=255)

                                                                           tACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTgg                                                                        >  5:259949/1‑149 (MQ=255)

                                                                               ggATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAAt                                                                    <  6:299105/149‑1 (MQ=255)

                                                                                gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg                                                                   >  7:156192/1‑149 (MQ=255)

                                                                                gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg                                                                   >  4:369157/1‑149 (MQ=255)

                                                                                gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg                                                                   >  7:128321/1‑149 (MQ=255)

                                                                                gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg                                                                   >  7:108280/1‑149 (MQ=255)

                                                                                   gAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGcc                                                                 >  6:198308/1‑148 (MQ=255)

                                                                                     gCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCa                                                               <  6:259949/148‑1 (MQ=255)

                                                                                      cATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGc                                                             >  8:208505/1‑149 (MQ=255)

                                                                                           gCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGcc                                                        >  5:221373/1‑149 (MQ=255)

                                                                                             gTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGtt                                                                                >  3:310293/1‑123 (MQ=255)

                                                                                             gTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGtt                                                                                <  4:310293/123‑1 (MQ=255)

                                                                                              tGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGAt                                                                                                             >  1:383229/1‑93 (MQ=255)

                                                                                              tGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGAt                                                                                                             <  2:383229/93‑1 (MQ=255)

                                                                                              tGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTCATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGc                                                     <  1:285974/149‑1 (MQ=255)

                                                                                                   gCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCt                                                >  5:23685/1‑149 (MQ=255)

                                                                                                     cAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGt                                              <  3:275372/149‑1 (MQ=255)

                                                                                                         cAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTtcga                                          <  6:381553/149‑1 (MQ=255)

                                                                                                          aGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTtcgat                                         <  1:62328/149‑1 (MQ=255)

                                                                                                             gggAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGTTTGCCCGCAGCCAGTtcgatcga                                      >  1:344494/1‑149 (MQ=255)

                                                                                                               gAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGAcc                                    <  8:17188/149‑1 (MQ=255)

                                                                                                                aaGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAg                                                                             <  6:33501/107‑1 (MQ=255)

                                                                                                                aaGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGAccc                                   >  5:38121/1‑149 (MQ=255)

                                                                                                                     ttttACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCt                              >  5:275349/1‑149 (MQ=255)

                                                                                                                       ttACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTg                             <  7:208505/148‑1 (MQ=255)

                                                                                                                        tACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGc                            <  8:128321/148‑1 (MQ=255)

                                                                                                                          cccGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCtt                          <  5:198308/148‑1 (MQ=255)

                                                                                                                          cccGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCtt                          <  1:323306/148‑1 (MQ=255)

                                                                                                                           ccGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTtcgat                                         >  3:215838/1‑132 (MQ=255)

                                                                                                                           ccGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTtcgat                                         <  4:215838/132‑1 (MQ=255)

                                                                                                                            cGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGAc                       <  7:270250/149‑1 (MQ=255)

                                                                                                                               cagcaAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAg                    >  2:309528/1‑149 (MQ=255)

                                                                                                                                   aaaCGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTg                                                                         >  6:127518/1‑92 (MQ=255)

                                                                                                                                   aaaCGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGggcg                >  3:259799/1‑149 (MQ=255)

                                                                                                                                    aaCGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGggcgg               <  8:372055/149‑1 (MQ=255)

                                                                                                                                      cgcaaaCGCCCGGCCTTGTGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCtt                          >  3:260770/4‑136 (MQ=255)

                                                                                                                                      cgcaaaCGCCCGGCCTTGTGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCtt                          <  4:260770/133‑1 (MQ=255)

                                                                                                                                      cGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGgcggcg             <  8:43910/149‑1 (MQ=255)

                                                                                                                                       gAAAACGCCCGGCGCAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGa            >  3:47036/1‑149 (MQ=255)

                                                                                                                                         aaaCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATg          >  1:308352/1‑149 (MQ=255)

                                                                                                                                          aaCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTGCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATgg         <  2:330038/149‑1 (MQ=255)

                                                                                                                                           aCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGc        <  6:23685/149‑1 (MQ=255)

                                                                                                                                                cGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTccc   <  2:308352/149‑1 (MQ=255)

                                                                                                                                                 ggCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCg  <  4:180863/149‑1 (MQ=255)

                                                                                                                                                  gCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCg  >  7:381287/1‑148 (MQ=255)

TGGACGATTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGT‑TTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAACGAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCG  >  NC_002947/1054315‑1054607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`