| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 122,215 | C→G | 5.6% | intergenic (+25/+36) | katE → / ← PP_0116 | hydroperoxidase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 122,215 | 0 | C | G | 5.6% | 229.2 / 3.2 | 71 | intergenic (+25/+36) | katE/PP_0116 | hydroperoxidase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (30/37); new base G (2/2); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
AAGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCA > NC_002947/122071‑122360 | aaGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCcctcc > 5:80676/1‑149 (MQ=255)aaGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCcctcc > 2:104694/1‑149 (MQ=255) aggaggACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCcctcct < 7:250736/149‑1 (MQ=255) gaCAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGt < 8:224412/149‑1 (MQ=255) aGGGTCGGTTGCTCGGGTCTGAGCAGAAGGCAGGGGATGCGTTTGTCTAAGCGGTAGAAGGCCTCCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGa < 5:414081/149‑1 (MQ=255) ggggCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAg > 2:382967/1‑149 (MQ=255) gCTGTTGCTCGGGGATGAGCAGTAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGGGGGAGCGGGAGGCGGCGGCTGAAGCTGTTGCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCgg < 7:239759/149‑1 (MQ=255) gCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCgg < 3:80269/149‑1 (MQ=255) ttGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCcctc < 8:124191/130‑1 (MQ=255) ttGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑AGGGTAAACCCcctc > 7:124191/1‑130 (MQ=255) gCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGTCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTa < 6:300960/148‑1 (MQ=255) gCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAc > 8:233521/1‑149 (MQ=255) cTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAcc > 2:273115/1‑149 (MQ=255) cTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAc < 1:382967/148‑1 (MQ=255) tCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTAccc > 4:138556/1‑149 (MQ=255) ggggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCcgc < 2:143495/149‑1 (MQ=255) ggATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCcgcg > 2:155902/1‑148 (MQ=255) tGAGGAGAAGTCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCTCCGGGTGTGGGAGCGGGAGGTTGCGGCTGATGCTGTTCCTGCCTTACTAGGCGTTTTGG‑CTTGTAAACCGCGTCCTTATGTTGGTGCGGTTTTACCGGCGAAg < 8:19744/148‑1 (MQ=255) ggCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTActgc < 1:155902/149‑1 (MQ=255) aGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGATGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGa > 8:178713/1‑149 (MQ=255) taTGCCTTAGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCg < 8:330098/148‑1 (MQ=255) gATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTa < 7:331904/111‑1 (MQ=255) gATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTa > 8:331904/1‑111 (MQ=255) gATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGc < 7:233521/148‑1 (MQ=255) aTGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGATGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCgg < 7:178713/149‑1 (MQ=255) aTGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCgg < 8:37472/149‑1 (MQ=255) ccTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGAc < 3:138556/149‑1 (MQ=255) cTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCGTCGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGAc < 1:324855/149‑1 (MQ=255) tttGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAAccccc > 3:104010/1‑95 (MQ=255) tttGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAAccccc < 4:104010/95‑1 (MQ=255) tttGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAc > 4:102512/1‑118 (MQ=37) tttGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAc < 3:102512/118‑1 (MQ=37) tttGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGCTGTAGGAGCGGGTTTTCCCGCGCAGCGTTTACTGCTGATGCGGGACCa > 8:328837/1‑149 (MQ=255) tCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGca < 6:80676/148‑1 (MQ=255) aaaGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAccc < 6:84584/114‑1 (MQ=25) aaaGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcacca > 5:75093/1‑149 (MQ=255) aaaGAGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCGCTCCTACATCAGGAGGGGGTTTAccc > 5:84584/1‑114 (MQ=25) aaGCGGTAGATGGCCACCGGGGGGGGGTGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGcaccac < 4:4819/149‑1 (MQ=255) aaGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGc < 3:143875/144‑1 (MQ=255) aaGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGc > 4:143875/1‑144 (MQ=255) aGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGcc > 6:225072/1‑149 (MQ=255) aGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGcc > 3:29210/1‑149 (MQ=255) aGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCCGGACCAGCACAACATGTGcc > 6:230717/1‑149 (MQ=255) gAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGcc < 7:338186/148‑1 (MQ=255) gAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCg > 1:326771/1‑149 (MQ=255) aGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCgg > 8:151108/1‑148 (MQ=255) gCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGc > 1:404138/1‑132 (MQ=255) gCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGc < 2:404138/132‑1 (MQ=255) ccACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑agc > 2:65212/1‑149 (MQ=255) ggTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAgcgc > 1:44518/1‑149 (MQ=255) ggTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAgcgc > 1:214785/1‑149 (MQ=255) gtgtGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CTGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCt < 7:78069/149‑1 (MQ=255) aGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCt > 4:239156/1‑148 (MQ=255) gCGTGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGTCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGa < 7:382699/149‑1 (MQ=255) gCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGa < 6:75093/149‑1 (MQ=255) ggAGGCGGCGGCTTAAGGTGTTCCTGCCTGACAAGGCCCTTTCG‑CGGGTAAACCCCCTCCTGATGTTGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgc < 4:204473/149‑1 (MQ=255) aGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgctt < 7:151108/149‑1 (MQ=255) gcggcggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgcttct < 2:214785/149‑1 (MQ=255) cggcggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgcttctg > 5:129389/1‑149 (MQ=255) ggcggcTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgcttctgc < 7:328837/149‑1 (MQ=255) tGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGc > 2:115786/1‑149 (MQ=255) gCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCt > 8:25526/1‑104 (MQ=255) ttCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAAcc < 2:326771/148‑1 (MQ=255) cctgcctgACACGGCCTTTTCG‑GGGGAAACCCCCCTCCGCATGTAGCCCGGGGTTAACCCGCTAAGCGTTTACTGCTCATGCGGGACCCGCACCACCTGTGCGGGC‑TGCGATCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCa < 1:65212/148‑1 (MQ=255) cctgcctgACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGTGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCa > 1:311063/1‑148 (MQ=255) aCAAGGCCTTTTCG‑CGGTTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAAt < 5:230717/148‑1 (MQ=255) aCAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAAt < 5:225072/148‑1 (MQ=255) cAAGGCCTTTTCG‑CGGGTAAACCGCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCt < 3:296802/149‑1 (MQ=255) aaGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgctt > 6:43500/1‑119 (MQ=255) aaGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgctt > 6:49513/1‑119 (MQ=255) aaGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgctt < 5:49513/119‑1 (MQ=255) aaGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGAtgctt < 5:43500/119‑1 (MQ=255) gCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGCAAGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc < 1:104694/149‑1 (MQ=255) gCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgcg > 1:54359/1‑149 (MQ=255) ccTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc > 1:166480/1‑147 (MQ=255) ccTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTgc < 2:166480/147‑1 (MQ=255) ttttCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAc > 2:376594/1‑149 (MQ=255) ttCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCAcgc > 4:50108/1‑149 (MQ=255) ccccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCa > 8:189491/1‑148 (MQ=255) ccccTCCTGATGTAGGAGCGGGTTTAACCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCATCa > 7:37606/1‑148 (MQ=255) cccTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCa > 8:112214/1‑147 (MQ=255) | AAGGAGGACAAGGGGCTGTTGCTCGGGGATGAGCAGAAGGCAGTGGATGCCTTTGTCAAAGCGGTAGAAGGCCACCGGGTGTGGGAGCGGGAGGCGGCGGCTGAAGCTGTTCCTGCCTGACAAGGCCTTTTCG‑CGGGTAAACCCCCTCCTGATGTAGGAGCGGGTTTACCCGCGAAGCGTTTACTGCTGATGCGGGACCAGCACCACCTGTGCCGGC‑AGCGAGCGCTGGATCTGATGCTTCTGCTTCAGCTCGAACCCACTGTCAATCTTGCGCACGCGCTTTTCCAGCA > NC_002947/122071‑122360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |