| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,093,922 | A→T | 5.8% | L82Q (CTG→CAG) | ptsN ← | phosphotransferase system subunit IIA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,093,922 | 0 | A | T | 5.8% | 196.1 / 2.7 | 69 | L82Q (CTG→CAG) | ptsN | phosphotransferase system subunit IIA |
| Reads supporting (aligned to +/- strand): ref base A (35/30); new base T (2/2); total (37/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
GGACCTCCTTGCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGA > NC_002947/1093776‑1094069 | ggACCTCCTTGCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTgcagc < 7:253699/149‑1 (MQ=255) gACCTCCTTGCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTgcagca < 2:33840/149‑1 (MQ=255) gACCTCCTTGCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTgcagca < 2:27700/149‑1 (MQ=255) ctTGCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGgcgc > 2:327217/1‑149 (MQ=255) gCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGa > 1:94414/1‑149 (MQ=255) aTGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑Gcgcg > 5:32637/1‑147 (MQ=255) aTGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGa < 2:94414/149‑1 (MQ=255) aTGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGa < 4:258083/149‑1 (MQ=255) cgtgCGATCTGCCGCAGAAGTTCCCGGTGGGCATCGGTGGCCGCTTCGCGGACCAGCAGCACAAACACCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAAGCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGc < 8:189967/145‑1 (MQ=255) tGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCa > 4:175368/1‑148 (MQ=255) gCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATcc > 8:257832/1‑149 (MQ=255) gATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCt > 3:338835/1‑148 (MQ=255) tGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAg > 6:308536/1‑149 (MQ=255) tGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAg > 8:217459/1‑149 (MQ=255) gACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGc > 7:332507/1‑149 (MQ=255) aCGAAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCAACCGGCGCGCCATCCAGGGCGTCGTAATCGATAGGCGCTTCCACGTGCAGCAGGGCGCTGACGG‑GCGCGGAGCATCAGTCAAgac > 2:94823/1‑147 (MQ=255) aGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCa < 5:312019/149‑1 (MQ=255) tCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTgg > 7:136359/1‑149 (MQ=255) aaGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTggg < 6:32637/148‑1 (MQ=255) aGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGAt > 2:406347/1‑149 (MQ=255) aGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGAt < 1:327217/149‑1 (MQ=255) taTCGGTGTCCGCTTCGGGTAGCAGCAGGACAAACAGCAGGTCCACCGTCGCGCCCTCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCAt < 1:326124/118‑1 (MQ=255) taTCGCTGGCCGATTCGGGTACCAGCACCACAAAAACCAGGTCCACCGGCGCGCCATCCATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGAAGGTCGCTGAATG‑GCGCGGAGCAt > 2:326124/2‑119 (MQ=255) cATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATg < 3:16453/149‑1 (MQ=255) aTCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCTGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGc > 3:307536/1‑149 (MQ=255) aTCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCTGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGc > 3:312997/1‑149 (MQ=255) ggTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCAt > 5:415096/1‑149 (MQ=255) ggTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCAt > 6:296921/1‑149 (MQ=255) gTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCATGCCGGCAGTGTGGGATGGCGATGCCAtt > 7:186906/1‑149 (MQ=255) gTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCAtt > 3:45351/1‑149 (MQ=255) ggCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGTGATGCCATTGc < 1:406347/149‑1 (MQ=255) gCCGGTTGGGGTACCAGCAGCAAAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGGAGGGCGCTGACTGCGCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGc < 1:94823/149‑1 (MQ=255) gCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGcc > 7:312414/1‑149 (MQ=255) gCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGcc < 5:296921/149‑1 (MQ=255) cGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCgg < 6:323794/104‑1 (MQ=255) cGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCgg > 5:323794/1‑104 (MQ=255) cGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGc > 3:339202/1‑146 (MQ=255) cGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGc < 4:339202/146‑1 (MQ=255) gCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGa > 3:322076/1‑148 (MQ=255) gggTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGCTAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCg < 6:415096/148‑1 (MQ=255) ggTACCAGCAGCACAGACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCgg > 4:174839/1‑148 (MQ=255) ggTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGt < 8:312414/149‑1 (MQ=255) tACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAg < 8:332507/149‑1 (MQ=255) ccAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGaa > 8:48147/1‑149 (MQ=255) cagcagCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAAc > 3:135476/1‑149 (MQ=255) gcagcaCAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAAcc > 4:79774/1‑148 (MQ=255) aCAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTcc < 5:308536/149‑1 (MQ=255) cagcagGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTccc < 3:175368/149‑1 (MQ=255) cagGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCggg < 2:194351/149‑1 (MQ=255) agGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGc < 8:136359/149‑1 (MQ=255) cACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCAGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTAc > 2:26540/1‑147 (MQ=255) ccGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGt > 2:52467/1‑149 (MQ=255) cGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGtt < 1:385885/149‑1 (MQ=255) gcgcCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTc < 4:135476/149‑1 (MQ=255) cgcCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCGGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCg < 1:26540/149‑1 (MQ=255) ccATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGTGCTACCAGTTTTTCGaa < 6:344931/149‑1 (MQ=255) ccATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGaa < 1:52467/149‑1 (MQ=255) cATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAg < 3:79774/149‑1 (MQ=255) aTGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTc < 6:144193/149‑1 (MQ=255) cgtcgtAATCGATAGGCGCTTCCAGGTGCTGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGc < 4:312997/149‑1 (MQ=255) cgtcgtAATCGATAGGCGCTTCCAGGTGCTGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGc < 4:307536/149‑1 (MQ=255) cgtcgtAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGc < 4:45351/149‑1 (MQ=255) gtcgtAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCt < 5:273907/146‑1 (MQ=255) gtcgtAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCt > 6:273907/1‑146 (MQ=255) tcgtAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCAt > 6:85333/1‑149 (MQ=255) aTCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCCTCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCAtctc > 3:210505/1‑147 (MQ=255) tAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCt < 4:338835/149‑1 (MQ=255) gcgcTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTgg > 3:45838/1‑148 (MQ=255) cgcTTCCAGGTGAAGCAGGGCGCTGACTG‑GCGCGGATCATCCTTCAAGCCGGCAGTGTGGTATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACTTCCTGCATCTCCAGTTCTCGCa > 1:69320/1‑149 (MQ=255) ttCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACtt > 4:275227/1‑149 (MQ=255) ccAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTgg > 2:98052/1‑149 (MQ=255) cAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGt > 2:210876/1‑149 (MQ=255) cagcagGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGa < 5:85333/149‑1 (MQ=255) | GGACCTCCTTGCGATCGAGCATGCTGGCGATCTGACGCAGAAGTTCAAGGTGGGCATCGGTGGCCGCTTCGGGTACCAGCAGCACAAACAGCAGGTCCACCGGCGCGCCATCGATGGCGTCGTAATCGATAGGCGCTTCCAGGTGCAGCAGGGCGCTGACTG‑GCGCGGAGCATCCTTCAAGCCGGCAGTGTGGGATGGCGATGCCATTGCCGAAACCGGTAGAACCGAGCTTTTCCCGGGCTACCAGTTTTTCGAAGACGTCCTGCATCTCCAGTTCTGGCACTTGGTCGGCGA > NC_002947/1093776‑1094069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |