| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,120,470 | T→A | 6.4% | intergenic (‑212/‑90) | pepA ← / → PP_0982 | cytosol aminopeptidase/YjgP/YjgQ family permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,120,470 | 0 | T | A | 6.4% | 290.2 / 6.8 | 94 | intergenic (‑212/‑90) | pepA/PP_0982 | cytosol aminopeptidase/YjgP/YjgQ family permease |
| Reads supporting (aligned to +/- strand): ref base T (36/52); new base A (2/4); total (38/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.34e-01 | |||||||||||
CCGCGTCGTCGCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAGCGCCGTCAGCG > NC_002947/1120323‑1120617 | ccGCGTCGTCGCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCttt < 1:86300/149‑1 (MQ=255) cgcgTCGTCGCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTg < 4:207050/149‑1 (MQ=255) gcgTCGTCGCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGTCAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTgg < 8:42924/149‑1 (MQ=255) gcgTCGTCGCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTgg < 7:248878/149‑1 (MQ=255) tcgtcgCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCg > 1:178715/1‑148 (MQ=255) gtcgCGCACCAGCGGAATAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCGCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTGCGCCTTTGGCGAAc < 5:36919/149‑1 (MQ=255) gtcgCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAAc < 8:90098/149‑1 (MQ=255) gcgcACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCgg > 4:343930/1‑149 (MQ=255) gcgcACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCg < 3:117666/148‑1 (MQ=255) gcACCAGCGGAAAAGCTGCAAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCAAAGGCGAAcctcca < 8:137289/149‑5 (MQ=255) cACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCAt < 2:114659/149‑1 (MQ=255) cACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCAAAGGCGAAcctccat < 6:133634/149‑6 (MQ=255) cACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCAAAGGCGAAcctccat < 6:70655/149‑6 (MQ=255) aCCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCAtt > 3:92679/1‑149 (MQ=255) ccAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTg < 6:163669/149‑1 (MQ=255) cAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTgg > 8:96101/1‑149 (MQ=255) cAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTg > 6:329165/1‑148 (MQ=255) cAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTg < 5:329165/148‑1 (MQ=255) ggAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt < 3:349223/149‑1 (MQ=255) ggAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt < 1:148940/149‑1 (MQ=255) ggAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt > 2:296090/1‑149 (MQ=255) ggAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGGCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt < 5:232450/149‑1 (MQ=255) cTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTa > 6:110766/1‑149 (MQ=255) tGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTAc > 6:219374/1‑149 (MQ=255) gCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTAc > 3:73932/1‑148 (MQ=255) aGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAg < 6:373579/149‑1 (MQ=255) aGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGCCGGTTCGCCAAAGGCGAAcctccat < 1:391208/130‑6 (MQ=255) aGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGCCGGTTCGCCAAAGGCGAAcctccat > 2:391208/1‑125 (MQ=255) gTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAg > 1:316664/1‑148 (MQ=255) tttGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGt > 3:207017/1‑148 (MQ=255) aGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCAtt < 4:207017/148‑1 (MQ=255) aGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCAtt < 2:178715/148‑1 (MQ=255) gCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGt < 8:212724/149‑1 (MQ=255) ccTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGtt < 8:161606/149‑1 (MQ=255) cTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGttt > 3:128058/1‑149 (MQ=255) tgGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGgc < 4:73932/149‑1 (MQ=255) gCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGgcgc > 7:314552/1‑149 (MQ=255) aaGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCa < 5:219374/149‑1 (MQ=255) cTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATg < 2:316664/149‑1 (MQ=255) cTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGGTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCAt < 7:226213/148‑1 (MQ=255) cTGACAACCACGATGTGCGCATTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACATGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCAt < 7:80224/148‑1 (MQ=255) tGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt < 8:309868/113‑1 (MQ=255) tGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt > 7:309868/1‑113 (MQ=255) gACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCAGTGGTCTTGGAGGTACTAGGTCATTGTTTGGCGCCCTTGCATgg > 8:327953/1‑148 (MQ=255) aCAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt > 4:247356/1‑111 (MQ=255) aCAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCtt < 3:247356/111‑1 (MQ=255) aaCCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATgg < 7:21908/145‑1 (MQ=255) aaCCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATgg > 8:21908/1‑145 (MQ=255) cGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGcc < 4:92679/149‑1 (MQ=255) gATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGccc < 2:299291/149‑1 (MQ=255) gATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGccc < 7:8371/149‑1 (MQ=255) aTGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCt < 1:296090/149‑1 (MQ=255) tgtgCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTg < 5:110766/149‑1 (MQ=255) gtgCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATgg < 2:299782/136‑1 (MQ=255) gtgCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATgg > 1:299782/1‑136 (MQ=255) gcgcCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGAc > 4:334321/1‑148 (MQ=255) cgcCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACaa < 3:334321/149‑1 (MQ=255) gcCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAc > 3:349521/1‑149 (MQ=255) gcCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAc > 2:307003/1‑149 (MQ=255) ccTTCGTACGCGGCCAAGTTACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAcc < 7:75191/149‑1 (MQ=255) ccTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAcc < 7:218371/149‑1 (MQ=255) cTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCAt < 3:234642/123‑1 (MQ=255) cTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCAt > 4:234642/1‑123 (MQ=255) cTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAcc > 5:73315/1‑148 (MQ=255) cTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAcc < 6:73315/148‑1 (MQ=255) ttCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAAcc > 4:344949/1‑147 (MQ=255) cGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCa < 3:171859/147‑1 (MQ=255) cGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCa < 7:240558/147‑1 (MQ=255) cGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAg < 7:96101/148‑1 (MQ=255) gTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGa < 1:175702/149‑1 (MQ=255) gTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGa < 5:113736/149‑1 (MQ=255) aaGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAg > 3:158782/1‑137 (MQ=255) aaGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAg < 4:158782/137‑1 (MQ=255) aaGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGtt > 2:391329/1‑149 (MQ=255) tGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGa > 6:129507/1‑149 (MQ=255) tGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGa < 4:128058/149‑1 (MQ=255) aGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGt > 5:315027/1‑149 (MQ=255) gTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGt < 7:327953/149‑1 (MQ=255) caGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTAATAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTc > 5:283126/1‑149 (MQ=255) gATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCcg > 7:261679/1‑149 (MQ=255) aTAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCcgc > 3:267435/1‑149 (MQ=255) gcgcACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTcc < 6:315027/149‑1 (MQ=255) gcACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTg < 8:314552/149‑1 (MQ=255) ttACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGt > 8:124430/1‑123 (MQ=255) ttACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGt < 7:124430/123‑1 (MQ=255) aCATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCAcc < 1:391329/148‑1 (MQ=255) tGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTAGTCACCTTGa < 5:129507/149‑1 (MQ=255) ggAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAg > 8:27331/1‑149 (MQ=255) ggAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAg > 1:261829/1‑149 (MQ=255) gTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAGCGcc < 1:307003/149‑1 (MQ=255) gTTCGCCAAAGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAGCGcc > 7:34943/1‑149 (MQ=255) gCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAGCGCCGt > 7:339307/1‑147 (MQ=255) gCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAGCGCCGTCa < 3:344949/149‑1 (MQ=255) cTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGa < 7:366965/138‑1 (MQ=255) cTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGa > 8:366965/1‑138 (MQ=255) tttGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGCCACCTTGAGCGCCGTCAgcg > 3:199201/1‑149 (MQ=255) | CCGCGTCGTCGCGCACCAGCGGAAAAGCTGCCAGTTTGAGCCTGTGGCAAGCGTGCTGACAACCCCGATGTGCGCCTTCGTACGCGGCCAAGTGACAGGGGCGGTCAATCACAGGATAATGCGCGCACTTTACATGGAGGTTCGCCTTTGGCGAACCGGCATTGGTCTTGGATGTACTAAGTCATTGTTTGGCGCCATTGCATGGCAGTCCGCCCTGACAACCCAGGAGTGTCTGGTTTGATCGTCTTTCGTTATCTGTCCCGCGAGGTCCTGGTCACCTTGAGCGCCGTCAGCG > NC_002947/1120323‑1120617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |