| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,215,084 | G→T | 7.2% | Y625* (TAC→TAA) ‡ | PP_1061 ← | ATP‑dependent DNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,215,084 | 0 | G | T | 7.2% | 264.5 / 8.5 | 84 | Y625* (TAC→TAA) ‡ | PP_1061 | ATP‑dependent DNA helicase |
| Reads supporting (aligned to +/- strand): ref base G (37/40); new base T (2/4); total (39/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.81e-01 | |||||||||||
AGGGCCAGGCCCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCAGACAGCTCG > NC_002947/1214938‑1215228 | aGGGCCAGGCCCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAgg > 2:135585/1‑147 (MQ=255)aGGGCCAGG‑CCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAgg < 8:337767/146‑1 (MQ=255)aGGGCCAGG‑CCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAgg > 7:337767/1‑146 (MQ=255) ggCCAGGCCCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGt < 6:216404/149‑1 (MQ=255) cAGGCCCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTc > 5:96801/1‑147 (MQ=255) ggCCCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGc < 1:148311/149‑1 (MQ=255) ccccAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCaa < 4:370070/149‑1 (MQ=255) cAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTg > 5:212377/1‑149 (MQ=255) cAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTg < 2:69070/149‑1 (MQ=255) cgcgGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGTTGCTCGACTACCTGGccc < 3:243407/149‑1 (MQ=255) ggTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGca < 6:96801/149‑1 (MQ=255) gATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACaa < 5:372241/148‑1 (MQ=255) tGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCt < 3:297381/149‑1 (MQ=255) tGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCt < 5:362772/149‑1 (MQ=255) gCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGTTGCTCGACTACCTGGCCCg > 6:112356/1‑140 (MQ=255) gCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGTTGCTCGACTACCTGGCCCg < 5:112356/140‑1 (MQ=255) gCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCtt > 8:200150/1‑149 (MQ=255) cGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTc < 1:68812/149‑1 (MQ=255) cGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGGGCGGGCCAGTTGCTCGACTACCTGGCCCGcacccgtgaa < 6:264921/149‑8 (MQ=38) ggCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCg < 2:114855/149‑1 (MQ=255) cGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTc < 2:353176/118‑1 (MQ=255) cGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTc > 1:353176/1‑118 (MQ=255) cGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGATAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGt < 3:122318/149‑1 (MQ=255) ggTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCg > 6:271572/1‑147 (MQ=255) gTGAATGAATGATCAGTTGGGGCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGaat < 4:96795/149‑2 (MQ=255) aatgaatgATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTc < 5:392420/149‑1 (MQ=255) aatgaatgATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTc > 8:38298/1‑149 (MQ=255) atgaatgaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCg > 4:287032/1‑149 (MQ=255) gaatgaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGcc > 1:196862/1‑149 (MQ=255) aatgaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGc < 3:78163/147‑1 (MQ=255) aatgaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGc > 4:78163/1‑147 (MQ=255) aatgaTCAGTTGGGTCCCGCCGGACTCATAGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGCGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGACt > 4:27737/1‑149 (MQ=255) atgaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGc < 8:342574/146‑1 (MQ=255) atgaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGc > 7:342574/1‑146 (MQ=255) gaTCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGc > 2:104854/1‑148 (MQ=255) gTTGGGTCCCGCCGGACGCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCCGTTCGAAGGTCGCCTGCACCCAg > 8:366252/1‑149 (MQ=255) gggACCCGCCGTAATCTTATAAAATATGTACCATCACCTGCTTACCGCAGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGc < 1:135585/149‑1 (MQ=255) ggTCCCTCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTAAC‑CTGCCAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGAACAAGCTACGTCAAGTTCGAAGGTCGCCTGCAACCAgtc > 4:74708/1‑145 (MQ=255) cgccgGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTAcc < 7:200150/149‑1 (MQ=255) aTCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCgtgt > 5:39403/1‑149 (MQ=255) aTCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCgtg < 3:287032/148‑1 (MQ=255) gAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTcgc > 4:352758/1‑149 (MQ=255) aaaaaaCGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCa > 4:228058/1‑139 (MQ=255) aaaaaaCGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCa < 3:228058/139‑1 (MQ=255) aCGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTcgccgc > 8:278552/1‑146 (MQ=255) aCGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTcgccgc < 7:278552/146‑1 (MQ=255) ttCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGc > 2:64622/1‑147 (MQ=255) ttCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCa < 6:39403/149‑1 (MQ=255) tCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAg > 4:273469/1‑149 (MQ=255) cATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCTTGACGCCGCCTGCCAgcg > 4:101030/1‑149 (MQ=255) aTCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGTTGCTCGACTACCTGGccc > 1:279636/1‑75 (MQ=25) aTCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGTTGCTCGACTACCTGGccc < 2:279636/75‑1 (MQ=25) aTCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAgcgc > 4:44241/1‑149 (MQ=255) aTCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAgcgc < 6:212377/149‑1 (MQ=255) tCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAgcgc > 5:137272/1‑148 (MQ=255) cACCAGCGTATC‑CTGCGAGGGCAGGGTGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAgcgc > 4:19004/1‑147 (MQ=255) aCCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGGACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGGCCGCACAAGCTTCGTCCAGTTCGAAGGGCGCCTGCAACCAGGCGAGTACCTCCACCGTGTCGCCGCCTTCGAGCGCCa < 3:74708/148‑1 (MQ=255) aCCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCa < 7:169208/148‑1 (MQ=255) aCCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAg < 3:44241/149‑1 (MQ=255) aCCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAg > 3:70309/1‑149 (MQ=255) aGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTg < 5:194007/149‑1 (MQ=255) aGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGGCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTg < 3:27737/149‑1 (MQ=255) tC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCa < 8:21395/139‑1 (MQ=255) tC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCa > 7:21395/1‑139 (MQ=255) cTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCg < 7:38298/148‑1 (MQ=255) tGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGAt > 7:12882/1‑149 (MQ=255) cGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTc > 1:86807/1‑149 (MQ=255) gAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTcg > 7:91382/1‑149 (MQ=255) agggcagggcGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTcgc < 2:196862/149‑1 (MQ=255) gggcagggcGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTcgcg > 5:44745/1‑149 (MQ=255) cagggcGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCt > 5:73047/1‑149 (MQ=255) gcgcAAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTCGCCCGCACAACCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTCTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAg > 3:43069/1‑149 (MQ=255) cAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTcgcg > 3:124822/1‑138 (MQ=255) cAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTcgcg < 4:124822/138‑1 (MQ=255) cAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCgg < 2:86807/149‑1 (MQ=255) aaGCACTTCACGGGTGCGGGCCAGGTAGTCGTGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGACTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCggg > 1:41531/1‑149 (MQ=255) aaGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCggg > 1:357946/1‑149 (MQ=255) aGCACTTCACGGGTGCGGGCCAGGTACTCGACCAACTGGCCCGCACAAGCTTCGTCCAGGTCGCACGGCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGc < 3:101030/149‑1 (MQ=255) cTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCAcg < 3:273469/149‑1 (MQ=255) ttCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCAcgg > 1:39879/1‑149 (MQ=255) cACGGGTGCGGGCCAGGTAGTCGAGCAACTGGGCGGCACAAGCTTCGTCCAGTGCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCTGGCCTcgg < 4:43069/147‑1 (MQ=255) gggTGCGGGCCAGGTCGTCGAGCAACTGGCCCGCACAAGCTTCGGCCAGTTCGCCGGTCGCCTGCAACCAGGCCAGTACCTCCACCGGGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCa < 7:366252/149‑1 (MQ=255) ggTGCGGGCCAGGTACTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCCGCCGTGGCCCGGCTGCAg < 4:44059/149‑1 (MQ=255) cGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCAGACAg < 6:44745/149‑1 (MQ=255) gggCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCAGACAGc < 2:357946/149‑1 (MQ=255) gCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGTGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCAggcgcgaa < 3:352758/149‑8 (MQ=255) cAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCAAGTTCGAAGGTCGCCCGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCAGACAGCTCg > 6:312968/1‑148 (MQ=255) gTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCt < 6:369776/101‑1 (MQ=255) gTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCt > 5:369776/1‑101 (MQ=255) | AGGGCCAGGCCCCAGGCGCGGTTGATGCGGCTACCGTAGGGTGAATGAATGATCAGTTGGGTCCCGCCGGACTCATCGAAAAAACGTTCCATCACCAGCGTATC‑CTGCGAGGGCAGGGCGCCAAGCACTTCACGGGTGCGGGCCAGGTAGTCGAGCAACTGGCCCGCACAAGCTTCGTCCAGTTCGAAGGTCGCCTGCAACCAGGCCAGTACCTCCACCGTGTCGCCGCCTGCCAGCGCCAGTTGCTGGTCGATTCGCGCCTGCAGCCGGGCCACGGCGGCAGACAGCTCG > NC_002947/1214938‑1215228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |