| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,269,389 | C→G | 6.0% | D15H (GAT→CAT) | PP_1109 ← | GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,269,389 | 0 | C | G | 6.0% | 250.0 / 4.2 | 78 | D15H (GAT→CAT) | PP_1109 | GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (35/38); new base G (2/3); total (37/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
AGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGAAC > NC_002947/1269242‑1269537 | aGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCGTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATcc < 2:39466/149‑1 (MQ=255) cTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgt > 6:182171/1‑149 (MQ=255) tCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgtt > 4:55301/1‑149 (MQ=255) gCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagtg < 5:375931/149‑5 (MQ=255) gCCCGGGTGATGCCGTCAAAACACATTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGATTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCtttgt < 4:243955/149‑1 (MQ=255) gCCCGGGTGATGCCGTAAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGGATGCAGGCgagtg < 3:379974/149‑5 (MQ=255) cccGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgttgtt < 1:172095/149‑1 (MQ=255) cccGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgttgtt < 5:246948/149‑1 (MQ=255) cccGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCgttgtt < 7:309831/149‑1 (MQ=255) cGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTc < 6:386547/149‑1 (MQ=255) cGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTc < 3:55301/149‑1 (MQ=255) gCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGt > 5:297777/1‑148 (MQ=255) ccGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtg < 7:120786/148‑1 (MQ=255) gTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGtgat > 6:194724/1‑148 (MQ=255) aaCACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAg > 8:376410/1‑125 (MQ=255) aaCACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAg < 7:376410/125‑1 (MQ=255) aaCACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAg > 2:379655/1‑149 (MQ=255) ctccTTCGCTGACCAGCTTGGCGTAGGCCGACAGGACGGCGTGGTTACTGAAGTCCTCTGCATCGGTCAGCTTTCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCTCCTGCTTGCAGGCGTTGTTTCAAAAGGTGATGAAGGccg < 8:243086/147‑3 (MQ=255) acCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTg > 5:401083/1‑148 (MQ=255) cGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGGCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAgg < 7:250320/147‑1 (MQ=255) cGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAggg > 2:324098/1‑148 (MQ=255) cGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAgg < 6:401083/147‑1 (MQ=255) tGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAATTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTc < 3:360904/122‑1 (MQ=255) tGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAACTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTc > 4:360904/1‑122 (MQ=255) gCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATgg > 4:11851/1‑147 (MQ=255) ggCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTc < 6:336407/149‑1 (MQ=255) tAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGa > 3:342407/1‑148 (MQ=255) tAGGCCGACACGACGTCGGGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATTGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGaa < 6:263212/149‑1 (MQ=255) ccGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCg > 2:175414/1‑149 (MQ=255) acacGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 1:242545/149‑1 (MQ=255) cacGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGTTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAg < 4:342407/149‑1 (MQ=255) gtGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGaaaaaaaa < 3:69618/148‑1 (MQ=255) tGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAAGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGc < 3:155288/149‑1 (MQ=255) gTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGcc > 1:381558/1‑148 (MQ=255) aCTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTaa < 2:357190/148‑1 (MQ=255) cTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGGTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACa < 4:25415/149‑1 (MQ=255) aaGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAg < 8:29318/95‑1 (MQ=255) aaGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa < 2:395651/129‑1 (MQ=255) aaGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTa > 1:395651/1‑129 (MQ=255) gTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTaa < 3:11851/149‑1 (MQ=255) tCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGcc > 4:380033/1‑138 (MQ=255) tCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGcc < 3:380033/138‑1 (MQ=255) cACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACgg < 1:379655/149‑1 (MQ=255) cACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACg > 4:86825/1‑148 (MQ=255) cACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACg < 2:166101/148‑1 (MQ=255) aCTGCAGCGGTCAGCTTGCGGATGGAGGGCATGAGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACgg > 4:197262/1‑148 (MQ=255) tGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAg < 7:196011/107‑1 (MQ=255) tGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAg > 8:196011/1‑107 (MQ=255) tGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGaaa > 5:121456/1‑149 (MQ=255) cAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGaaa < 2:381558/147‑1 (MQ=255) tCAGCTTGCGGATGGAGTGCATGCGTTGCCCGGGCAACCAATCGCCTTCATCCAGTCGTTGTTTCAAAAGGTGATGAATGCTGCAGTGTATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTc < 7:273251/149‑1 (MQ=255) ttGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACgg < 5:31084/133‑1 (MQ=255) ttGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACgg > 6:31084/1‑133 (MQ=255) tGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTGAGAAAAAAAAGCCTAACAGAGAACGGAAATGCTTGTCGACTgg > 6:178408/1‑148 (MQ=255) cGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTc < 3:86825/149‑1 (MQ=255) cGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTc < 2:65753/149‑1 (MQ=255) gAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTg > 7:308923/1‑148 (MQ=255) aGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCTGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGc < 6:289437/129‑1 (MQ=255) aGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCTGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGc > 5:289437/1‑129 (MQ=255) cgagtggTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAAt > 1:297678/7‑149 (MQ=255) cATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATg > 3:289094/1‑149 (MQ=255) cATGAGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATg < 3:197262/149‑1 (MQ=255) cGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGc > 5:204408/1‑147 (MQ=255) gTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAg > 3:33773/1‑149 (MQ=255) cGGGCAACCACTCGCCTGCATCTGGGGGTTGTTTCAAAAGGTGATGAAGGCTGGAGGGGATCATGGCAGGTCCGAAACGGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGATTGGAGACTGTTGGTTTGCAATTGGCCCCcacagg > 7:61668/1‑147 (MQ=255) cGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATg > 7:198648/1‑149 (MQ=255) gggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTATAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGc < 1:324098/149‑1 (MQ=255) gggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATg < 5:301292/137‑1 (MQ=255) gggCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATg > 6:301292/1‑137 (MQ=255) aaCCTCTCGCCTGCATCCAGGCGTTGTTTCAAAAGCTTCTGAAGGCTGCAGGGGATCATGGCAGGTCCGTACCCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGGCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAat < 5:178408/149‑1 (MQ=255) aCCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAata < 6:121456/149‑1 (MQ=255) ccACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCATTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCAAGCACATGCAAatat > 3:88586/1‑149 (MQ=255) aacaacGCCTGGATGCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAatat > 6:67880/6‑149 (MQ=255) cACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATc > 3:235769/1‑149 (MQ=255) aacGCCTGGATGCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATccc > 2:167189/3‑149 (MQ=255) tCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCt > 4:96089/1‑149 (MQ=255) gCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCtgt > 6:159505/1‑149 (MQ=255) gCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCtgt > 8:13461/1‑149 (MQ=255) gCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCt < 5:182171/147‑1 (MQ=255) ccAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGAAc > 1:270348/1‑149 (MQ=255) | AGTAGCCTCGCCCGGGTGATGCCGTCAACACACCTTCGCTGACCAGCTGGGCGTAGGCCGACACGACGTCGTGGTAACTGAAGTCCACTGCAGCGGTCAGCTTGCGGATGGAGGGCATGCGTTGCCCGGGCAACCACTCGCCTGCATCCAGGCGTTGTTTCAAAAGGTGATGAAGGCTGCAGGGGATCATGGCAGGTCCGAAACCGTTAGAAAAAAAAGCCTAACAGTTAACGGAAATGCTTGTCGACTGTTCGTTTGCAAATGGCCAGCACATGCCAATATCCCTGTGTCGGAAC > NC_002947/1269242‑1269537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |