| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 12,688 | A→T | 6.0% | Q156L (CAG→CTG) | recF → | DNA replication/repair protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 12,688 | 0 | A | T | 6.0% | 256.5 / 5.0 | 83 | Q156L (CAG→CTG) | recF | DNA replication/repair protein |
| Reads supporting (aligned to +/- strand): ref base A (42/36); new base T (2/3); total (44/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
GCAATTGGCTGAGTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAGCCCGTC > NC_002947/12542‑12833 | gcAATTGGCTTAGTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGa < 7:177108/149‑1 (MQ=255) tGAGTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTCGCAACGCCTTCAGAAGGCGCTGc > 4:228846/1‑149 (MQ=255) aGTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGGGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAGCGCCTTCTGAAGGCGTTGcca < 7:329697/149‑3 (MQ=255) gTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAGCGCCTTCTGAAGGCGTTGccag < 2:284389/149‑4 (MQ=255) gTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGc < 7:357281/149‑1 (MQ=255) ccGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCTGAAGGCGTTGcc < 3:371074/140‑2 (MQ=255) ccGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCTGAAGGCGTTGcc > 4:371074/1‑139 (MQ=255) ccGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGaa > 1:46902/1‑149 (MQ=255) gCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGt > 8:96775/1‑149 (MQ=255) tcatcaACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACATCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTg > 3:38100/1‑149 (MQ=255) atcaACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCa < 4:57093/116‑1 (MQ=255) atcaACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCa > 3:57093/1‑116 (MQ=255) atcaACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGAGCTGCGGCAGCGGACCTCATGGTTG‑Cg > 8:80684/1‑149 (MQ=255) atcaACCCAGACAGTTTACGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACTGGGGGGGTGTTCCACGTGGAACCTCGTTTTATGCCAGCCTGGCAACGCATTCAGAAGGCGCTCAGGACGCCGAACTCATGGTTG‑c > 4:106975/1‑149 (MQ=255) caACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCa < 7:104059/114‑1 (MQ=255) caACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCa > 8:104059/1‑114 (MQ=255) aaCCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCa > 4:312098/1‑149 (MQ=255) aCCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCAt < 7:36093/149‑1 (MQ=255) aGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAg < 7:168490/124‑1 (MQ=255) aGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAg > 8:168490/1‑124 (MQ=255) gACAGTTTCCGGCTGCTGGAAGGTACCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTa > 1:295844/1‑148 (MQ=255) taGTTTCCGGCTGCTGGAATGTGCCCACAAAATACGCCGGCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGTCAACTCCTTCAGAAGGCGATGCGGAAGCGGAACTCATGGTTG‑CGTCATGGTaca < 4:38100/147‑1 (MQ=255) ttCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGt < 7:108926/135‑1 (MQ=255) ttCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCATGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGCTTG‑Cga > 8:108926/1‑134 (MQ=255) tCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGa < 6:229417/148‑1 (MQ=255) ggCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCa < 3:297768/149‑1 (MQ=255) gctgctGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAg > 3:281557/1‑149 (MQ=255) gctgctGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAg < 7:157851/149‑1 (MQ=255) gcagctgGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAg < 7:340096/146‑1 (MQ=255) tgctgGAAGGTGCCCCCAATATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑c < 1:391569/126‑1 (MQ=255) tgctgGAAGGTGCCCCCAAGATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑c > 2:391569/1‑126 (MQ=255) ctgGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTc > 3:138021/1‑149 (MQ=255) gAAGGTGCCCCCAAAATACGCCGCCAGGTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCg > 1:12248/1‑148 (MQ=255) gAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGc > 8:283988/1‑148 (MQ=255) gAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGc < 2:12248/148‑1 (MQ=255) gTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAgcc < 7:96775/149‑1 (MQ=255) cccAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCt < 3:4199/89‑1 (MQ=255) cccAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCt > 4:4199/1‑89 (MQ=255) cccAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTg > 7:276764/1‑149 (MQ=255) cccAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTg > 5:152911/1‑149 (MQ=255) ccAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTgg > 1:219461/1‑149 (MQ=255) ccAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTgg > 4:391794/1‑149 (MQ=255) cAAAATACGGAGCCA‑GGTTGTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTggg < 8:276764/149‑1 (MQ=255) aCGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCgg > 6:215148/1‑148 (MQ=255) cgccgcCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCggg < 5:215148/148‑1 (MQ=255) gccA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATtg > 8:94064/1‑149 (MQ=255) ccA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATtgt < 2:22721/149‑1 (MQ=255) tttCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCt < 3:391794/149‑1 (MQ=255) tttCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCt < 2:295844/149‑1 (MQ=255) ggACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGAccc < 6:292088/108‑1 (MQ=255) ggACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGAGGAACTCATGGTTG‑CGTCATGGTACACTTGAccc > 5:292088/1‑108 (MQ=255) gggggggTGTTCCACGTGGTACCTCGTTTTCTTCCAGCCTGGCATCGCCTTCAGAAGGCGCTGCGGCAGCGTAACTCATGGTTG‑CGTCATGGTAGACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAgcgc < 3:106975/148‑1 (MQ=255) ggggTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGTCCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCgg > 6:93770/1‑148 (MQ=255) ggggTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGa < 4:138021/149‑1 (MQ=255) gtgtTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGaaa > 1:310676/1‑148 (MQ=255) gtgtTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAAt < 7:94064/149‑1 (MQ=255) ttCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGa < 7:283988/149‑1 (MQ=255) ttCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCAGAAATAGa < 4:281557/149‑1 (MQ=255) ccACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGAt > 8:122648/1‑148 (MQ=255) ccACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGAt > 6:268592/1‑148 (MQ=255) cACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGa < 8:229374/149‑1 (MQ=255) aCGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGaa < 3:228846/149‑1 (MQ=255) aCGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGa > 5:368954/1‑148 (MQ=255) cGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAAt < 2:332458/149‑1 (MQ=255) ccTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGTAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCg < 3:350044/149‑1 (MQ=255) ccTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTAGCTAGCGCGGAAATAGATGAATACCGTCg > 7:193872/1‑149 (MQ=255) ttttCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATg < 3:67067/134‑1 (MQ=255) ttttCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATg > 4:67067/1‑134 (MQ=255) tGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACAGTCGCAACTACAt > 2:160574/1‑148 (MQ=255) gCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATg > 2:165605/1‑48 (MQ=255) gCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATg < 1:165605/48‑1 (MQ=255) ccAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATc > 2:257984/1‑147 (MQ=255) ccAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATc > 1:303587/1‑147 (MQ=255) ccAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATCGTTT‑CGTCATTGTAAACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGAGCCTGGCTAGCGAGGAAATAGATGAAGACCGTCGCAACTACATc > 2:360813/1‑147 (MQ=255) ccAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCAAGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATc > 2:276244/1‑147 (MQ=255) cAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTGCCGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATc > 1:100885/1‑147 (MQ=255) cAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAg < 6:152911/149‑1 (MQ=255) aGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAgg > 8:328295/1‑149 (MQ=255) cTGGCAACGCCATCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATCGTACACTTGACCCCGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGCAATAGATGAATACCGTCGCAACTACATCAAGGCCt > 3:319976/1‑149 (MQ=255) gCAGCGCCTTCTGAAGGCGTTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTg > 2:366808/1‑148 (MQ=255) gCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTg < 1:276244/148‑1 (MQ=255) gCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTg < 6:368954/148‑1 (MQ=255) gCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGa < 2:46902/149‑1 (MQ=255) aaCGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAg > 2:101209/1‑149 (MQ=255) gCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAGccc < 3:312098/149‑1 (MQ=255) gCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAGccc > 2:226828/1‑149 (MQ=255) ttCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAACCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAGCCCGTc > 5:163334/1‑149 (MQ=255) | GCAATTGGCTGAGTTACTGCCGCTTCAGCTCATCAACCCAGACAGTTTCCGGCTGCTGGAAGGTGCCCCCAAAATACGCCGCCA‑GTTTCTGGACT‑GGGGGGTGTTCCACGTGGAACCTCGTTTTCTGCCAGCCTGGCAACGCCTTCAGAAGGCGCTGCGGCAGCGGAACTCATGGTTG‑CGTCATGGTACACTTGACCCAGCTTCGCAAGCCGCCTGGGACCGGGAATTGTGCCTGGCTAGCGCGGAAATAGATGAATACCGTCGCAACTACATCAAGGCCTTGAAGCCCGTC > NC_002947/12542‑12833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |