Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,517,281 | C→A | 8.2% | A157A (GCC→GCA) | murE → | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,517,281 | 0 | C | A | 8.2% | 231.7 / 6.0 | 77 | A157A (GCC→GCA) | murE | UDP‑N‑acetylmuramoyl‑L‑alanyl‑D‑glutamate‑‑2, 6‑diaminopimelate ligase |
Reads supporting (aligned to +/- strand): ref base C (33/37); new base A (3/4); total (36/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 |
CGGCACCAACGGCAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGACCACCTCGAC > NC_002947/1517134‑1517428 | cGGCACCAACGGCAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGcc > 4:18238/1‑148 (MQ=255) cGGCACCAACGGCAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGcc < 3:18238/148‑1 (MQ=255) cGGCACCAACGGCAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCg > 2:6587/1‑149 (MQ=255) cGGCAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCACGGCAATCgg < 1:409270/149‑2 (MQ=255) cAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGAccc < 3:240047/149‑1 (MQ=255) aaGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCACGGCAATCgggtcg < 8:351613/149‑6 (MQ=255) cAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAAc < 1:227770/149‑1 (MQ=255) aaGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAAc > 1:150967/1‑148 (MQ=255) gtgtTACCCAACTGGTCGCCCGGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCACGGCAATCgggt < 7:84234/140‑4 (MQ=255) gtgtTACCCAACTGGTCGCCCGGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGACTGACCACGCCCGACCCGATTGCACGGCAATccgga > 8:84234/1‑136 (MQ=255) gtgaTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGAc < 6:24106/149‑1 (MQ=255) tgtTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGAc > 4:17508/1‑148 (MQ=255) gctttcAACTGGTCGCCCAGGGGCGCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGGCGTGGAATCGACCCTCAACGACCTc < 6:224630/144‑1 (MQ=255) aCCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGa > 2:60495/1‑133 (MQ=255) aCCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGa < 1:60495/133‑1 (MQ=255) cAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGa > 7:64671/1‑148 (MQ=255) cTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAgg < 6:48042/149‑1 (MQ=255) gTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAggcgg > 8:263723/1‑149 (MQ=255) tCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAggcggc > 7:337896/1‑149 (MQ=255) tCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAggcggc > 7:206127/1‑149 (MQ=255) tCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAggcggc > 8:99007/1‑149 (MQ=255) gcTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCg > 2:18479/1‑149 (MQ=255) gcTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCg > 8:115004/1‑149 (MQ=255) gcTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCg > 8:45444/1‑149 (MQ=255) cTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCTGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGt < 3:339017/149‑1 (MQ=255) gCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATg > 5:346885/1‑148 (MQ=255) cTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCAttg < 7:263723/148‑3 (MQ=255) cTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATgg < 2:81567/148‑1 (MQ=255) cTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATg < 8:64671/147‑1 (MQ=255) ggCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGaa < 2:150967/147‑1 (MQ=255) ggCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGc < 5:255105/149‑1 (MQ=255) gCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGACCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACACTCAACGACCTCAAGAAAGGCGGCGCCATGGCCGTGGCCATGGAAGTGTCTTCCCATGc > 7:27945/1‑148 (MQ=255) ccTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGccc > 4:378484/1‑149 (MQ=255) cTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCt < 1:6587/149‑1 (MQ=255) cTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAACGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCt > 8:171781/1‑149 (MQ=255) aTTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCTTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTg < 1:338575/147‑1 (MQ=255) aTTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTg < 1:37676/147‑1 (MQ=255) aTTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTg > 8:334266/1‑147 (MQ=255) ttGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAg < 1:18479/149‑1 (MQ=255) gctcgcTGGGTACGGGTTTCTAGGGCGAGTTGCAGAGCGGCCGGCTGACGACGACCGACCCGTTTGCCGTGCAATCGACCCTCTACGACCTCATGAAAGGCGGCGCCAGGGCCGTGGCCATGTAAGTGTCTTCCCATGCGCTGGAGCaa < 8:27945/144‑1 (MQ=255) gCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGc > 2:98891/1‑147 (MQ=255) cACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAg < 6:346885/149‑1 (MQ=255) aCCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAgg < 7:334266/149‑1 (MQ=255) ggTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCgg < 7:99007/147‑1 (MQ=255) gTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGTCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGtt > 1:84230/1‑149 (MQ=255) aCCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCtt < 4:286622/121‑1 (MQ=255) aCCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCtt > 3:286622/1‑121 (MQ=255) gTTTCTACGGCGAGTTGAAGATCGGCCTCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGACATTGAAGTGTCTTCCCATGCCCTGTAGCAAGGCAGGGTTGCCGc > 8:194453/1‑148 (MQ=255) gCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTc < 1:98891/149‑1 (MQ=255) gCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTc < 8:337896/149‑1 (MQ=255) gCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCACTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATcg > 6:211498/1‑149 (MQ=255) cAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAAc < 5:243928/54‑1 (MQ=255) cAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAAc > 6:243928/1‑54 (MQ=255) agagCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGCCATcgcg > 3:247438/1‑149 (MQ=255) gagCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCgg > 2:406064/1‑149 (MQ=255) ccgccTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCgg < 2:365256/143‑1 (MQ=255) ccgccTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCgg > 1:365256/1‑143 (MQ=255) ccgccTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGtgatga < 7:171781/149‑1 (MQ=255) ccgccTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGtgatga < 3:17508/149‑1 (MQ=255) ccTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGAGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTCGAATTCGACATCGCGGTGATGAcc > 4:254865/1‑148 (MQ=255) cTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCaa < 1:406064/149‑1 (MQ=255) aCCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAAc < 7:115004/147‑1 (MQ=255) cACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGt > 6:175995/1‑149 (MQ=255) cACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGt > 6:169822/1‑149 (MQ=255) aCGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTc > 7:378656/1‑123 (MQ=255) aCGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTc < 8:378656/123‑1 (MQ=255) ccgacccgaTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGtgatg < 8:254341/134‑1 (MQ=255) ccgacccgaTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGtgatg > 7:254341/1‑134 (MQ=255) acccgaTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGac < 6:145253/149‑1 (MQ=255) cccgaTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGacc < 7:45444/149‑1 (MQ=255) cccgaTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATCCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGacc > 8:369034/1‑149 (MQ=255) tcgaTTGCACGGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACt > 3:392043/2‑107 (MQ=255) tcgaTTGCACGGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACt < 4:392043/106‑1 (MQ=255) tcgaTTGCACGGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGacca > 2:103902/2‑149 (MQ=255) ccgaTTGCCCTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCCCCAGGGCCGTGGCCATAGAAATGTCTTCCCATGCCCTCCAGCAAGGCCCGGTTGCCGCACTGCAATTCGACATCGCGGTGATGACCAACCAGTCCCGccacca > 8:358058/1‑149 (MQ=255) cgaTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGaccac < 4:247438/149‑1 (MQ=255) aTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGACCACCt < 5:175995/149‑1 (MQ=255) aTTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGACCACCt < 5:169822/149‑1 (MQ=255) gCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGACCACCTCg < 3:378484/148‑1 (MQ=255) ccGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGACCCCCTCGAc > 4:6665/1‑149 (MQ=255) | CGGCACCAACGGCAAGACAAGTGTTACCCAACTGGTCGCCCAGGCGCTCGACCTGCTTGGCCAGCGCTGCGGCCTGATTGGCACCCTGGGTACCGGTTTCTACGGCGAGTTGCAGAGCGGCCGCCTGACCACGCCCGACCCGATTGCCGTGCAATCGACCCTCAACGACCTCAAGAAAGGCGGCGCCAGGGCCGTGGCCATGGAAGTGTCTTCCCATGCCCTGGAGCAAGGCCGGGTTGCCGCACTGGAATTCGACATCGCGGTGATGACCAACCTGTCCCGCGACCACCTCGAC > NC_002947/1517134‑1517428 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |