| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,580,604 | C→T | 7.3% | V265I (GTC→ATC) | ttgB ← | efflux pump membrane protein TtgB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,580,604 | 0 | C | T | 7.3% | 280.2 / 7.9 | 96 | V265I (GTC→ATC) | ttgB | efflux pump membrane protein TtgB |
| Reads supporting (aligned to +/- strand): ref base C (44/44); new base T (3/4); total (47/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 | |||||||||||
CAGGCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGAA > NC_002947/1580458‑1580752 | cAGGCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACAt > 4:161433/1‑149 (MQ=255) aGGCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATc > 6:218162/1‑149 (MQ=255) tttGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGcc > 5:197110/1‑147 (MQ=255) tGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCa < 8:111830/147‑1 (MQ=255) gATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGATGTCGCCCaag > 6:43047/1‑146 (MQ=255) aTGGTGTGGGGCTGTGCCTTGTCGGTGTCCATGGCGTTGGCGCCGGTTGCCAGTTTTACCGTCAGGCCTGTAGACGTATTTGCGTTGAACTGGTCGCTGACGGCGTAGTTTTCAGCAC‑GCAGGCCTTCTTGGTCGAAATCGcccttgc < 6:392467/148‑5 (MQ=255) aTGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGATGTCGCCCaagta < 8:61418/149‑5 (MQ=255) aTGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGATGTCGCCCaagta < 6:155506/149‑5 (MQ=255) aTGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGATGTCGCCCaagta < 4:93313/149‑5 (MQ=255) aTGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGgc < 6:145822/148‑1 (MQ=255) tGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGATGTCGCCCaagtag < 5:43047/149‑6 (MQ=255) ggTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCa > 7:159928/1‑149 (MQ=255) gTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCAc < 5:218162/149‑1 (MQ=255) tctcGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCAcc > 3:245927/1‑149 (MQ=255) tctcGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCAcc > 3:250896/1‑149 (MQ=255) tcGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtg > 1:173609/1‑149 (MQ=255) gcgcAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACTGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtgt > 7:165806/1‑148 (MQ=255) gcgcAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtgt > 3:88738/1‑148 (MQ=255) gcAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCtgt < 5:388355/146‑1 (MQ=255) gCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTc > 5:166889/1‑149 (MQ=255) ggTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGa < 6:197110/149‑1 (MQ=255) gtgtCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGAc < 3:369491/149‑1 (MQ=255) tCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCtt < 2:218290/149‑1 (MQ=255) tCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCtt > 3:369026/1‑149 (MQ=255) tCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCt < 6:166889/148‑1 (MQ=255) cAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCtt > 8:342201/1‑147 (MQ=255) cAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTg < 8:236228/148‑1 (MQ=255) cAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTg > 7:236228/1‑148 (MQ=255) cAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGa < 3:394603/149‑1 (MQ=255) cAGCGAGTTGGCGCCGGTTCACAATTTTACCGCCAGGCCGGAAGCCGGCTTGCCCTAGAACTGGGCGCTGACGGCGTAGTTTTCACACA‑CCAGGCCTACTTGGGAGACATCGCCCAGGCGCAACTGTGAACAGACATTGTTGAACtt > 4:64444/1‑147 (MQ=255) aGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCttt < 7:132767/137‑1 (MQ=255) aGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCttt > 8:132767/1‑137 (MQ=255) gcgcGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGATGTCGCCCaag > 6:98630/1‑114 (MQ=255) gcgcGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAg > 1:395787/1‑148 (MQ=255) gcgcGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAg > 6:412986/1‑148 (MQ=255) gTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGa < 4:103008/149‑1 (MQ=255) gTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGa < 4:369026/149‑1 (MQ=255) cgcCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATActc < 8:165806/149‑1 (MQ=255) gTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGACCTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGaa < 6:229673/149‑1 (MQ=255) gTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGaa < 3:284388/149‑1 (MQ=255) ttGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAAc < 2:86059/149‑1 (MQ=255) cAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCt > 7:353136/1‑149 (MQ=255) aGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTc > 4:370753/1‑149 (MQ=255) gTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTcg > 3:63508/1‑149 (MQ=255) ttttACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTcgg > 5:84760/1‑149 (MQ=255) ttccGCCAGGCCGTAAGCCGGCGTGCCGTTTAACTGGGCGCGGACGGCTTAGTTTTCACCCG‑CCAGGGCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGGCTttgtt < 5:125453/112‑1 (MQ=255) tACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTcggcg < 5:159144/148‑1 (MQ=255) tACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTcggcg < 2:395787/148‑1 (MQ=255) tACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTcggcg < 8:136888/148‑1 (MQ=255) tACCGCCAGGACGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCCCCCC‑CCAGCCCTACTTCGGCGACAACGCCCAGGAGCAACTGTGAACCGACTtagtt > 6:125453/1‑114 (MQ=255) ccGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGtt > 8:312530/1‑149 (MQ=255) ccGCCAGGCCGGAAGCCGGCTTGCCGTAGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGtt > 1:12658/1‑149 (MQ=255) cGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGttt < 4:88738/149‑1 (MQ=255) cGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACACC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGttt > 1:375760/1‑149 (MQ=255) ccGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCg < 8:353136/149‑1 (MQ=255) cGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCgg < 4:245927/149‑1 (MQ=255) cGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCg > 5:314244/1‑148 (MQ=255) cGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCg < 6:314244/148‑1 (MQ=255) cGGAAGCCGGCGTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCgg < 4:250896/149‑1 (MQ=255) ggAAGCCGGCTTGCCGTTGAAATGGGCGCTGACGGCGTAGTTTTCACCCCTCCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTGGTTGACGTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCgg > 1:100611/1‑149 (MQ=255) gAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGt < 3:161433/149‑1 (MQ=255) gAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGt < 7:312530/149‑1 (MQ=255) aaGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTc < 6:84760/149‑1 (MQ=255) cGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGACCTGCTCGGCGGTTTGCAGGCGGGTCTTGc > 8:356892/1‑149 (MQ=255) cGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGc < 5:122625/149‑1 (MQ=255) ggCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGcc > 7:39791/1‑149 (MQ=255) cTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCga < 3:370753/149‑1 (MQ=255) ttGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGc > 1:155175/1‑136 (MQ=255) ttGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGc < 2:155175/136‑1 (MQ=255) gCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCgatg < 7:342201/148‑1 (MQ=255) cGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGGCTTTGTTGACCTTGAGCAGGATACTCTCGTACTGCTCGGCGGTTTGCAGGCGGGTCTGGCCGatgatg > 8:293302/1‑149 (MQ=255) gTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGAtgg > 3:106061/1‑149 (MQ=255) gAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGAtggtg < 5:171341/148‑1 (MQ=255) aCTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCg > 4:144676/1‑149 (MQ=255) cTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGt > 7:139491/1‑149 (MQ=255) ggCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGtt < 2:12658/147‑1 (MQ=255) cTGACGGCGTAGTTTTCACCCA‑CCAGGCCTACTTGGGCGACATCTCCCAGGCGCAACTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGTTCTTGCCGATGATTGTGGCGTTCAGCTg > 6:257122/1‑149 (MQ=255) cGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGccc > 8:212682/1‑149 (MQ=255) gTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTGCAGCTGGGTGCCCGGc < 4:63508/148‑1 (MQ=255) ttttCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCga > 6:354192/1‑118 (MQ=255) ttttCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCga < 5:354192/118‑1 (MQ=255) ttttCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAg > 1:137555/1‑149 (MQ=255) tCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAggg < 8:39791/148‑1 (MQ=255) aCCCC‑CCAGGGCTACTTGGGCGACATCGCCCAGGCTCACCTGTGAACCGTCTTTGTTGACCTTGAGCTGGATACTCTCGAACTGCTCGGCGGTTTGCTGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCt < 2:375760/148‑1 (MQ=255) aCCCC‑CCAGGCCTACTTGGGCGACATCGCCCATGCGGACCTGTTAACCGTCTTTGTTGACCTTGAGCCGGATAGTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGGGGCGTGCAGCTGGGTGCCCGGCAGGGCt < 3:35189/148‑1 (MQ=255) cccc‑ccAGGCCTAATTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTAGGCGGTTTGCAGGCGGGTCTTGCAGATGATGGTGGCGTTCAGCTGGGTGCCCGGAAGGGCTgg > 8:100770/1‑149 (MQ=255) ccc‑ccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTgg > 7:359105/1‑148 (MQ=255) c‑ccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAg > 1:98441/1‑149 (MQ=255) c‑ccAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGATGGCAg > 8:159845/1‑149 (MQ=255) ccTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTGCAGCTGGGTGCCCGGCAGGGCTGGCAGgccgcc < 2:173609/149‑1 (MQ=255) cctGGGCGATGTCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGc > 2:183982/3‑149 (MQ=255) cTTGGGCGACATCGCCCTGGCGCACGTGGTAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGATCTGCTCGGCGGTTTGCAGGCGGGTCTTGCGGATGATGGTGGGGTTCAGCTGGGTGCCCGGCTGGGCTGGCAGGCCGCGGAg < 8:154063/148‑1 (MQ=255) cTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGc < 3:144676/149‑1 (MQ=255) ggCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGc > 2:208814/1‑149 (MQ=255) gCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGcc > 1:27735/1‑149 (MQ=255) cGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCg < 8:139491/149‑1 (MQ=255) cATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGaa < 5:412986/149‑1 (MQ=255) | CAGGCCTTTGATGGTCTCGCGCAGTGCCTTGGCGGTGTCCAGCGCGTTGGCGCCGGTTGCCAGTTTTACCGCCAGGCCGGAAGCCGGCTTGCCGTTGAACTGGGCGCTGACGGCGTAGTTTTCACCCC‑CCAGGCCTACTTGGGCGACATCGCCCAGGCGCACCTGTGAACCGTCTTTGTTGACCTTGAGCAGGATACTCTCGAACTGCTCGGCGGTTTGCAGGCGGGTCTTGCCGATGATGGTGGCGTTCAGCTGGGTGCCCGGCAGGGCTGGCAGGCCGCCGAGCTGGCCGGAA > NC_002947/1580458‑1580752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |