Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,582,787 T→G 7.8% intergenic (‑233/‑25) ttgA ← / → ttgR efflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,582,7870TG 7.8% 181.2 / 3.1 60intergenic (‑233/‑25)ttgA/ttgRefflux pump periplasmic linker TtgA/HTH‑type transcriptional regulator TtgR
Reads supporting (aligned to +/- strand):  ref base T (25/30);  new base G (3/2);  total (28/32)
Fisher's exact test for biased strand distribution p-value = 6.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGG  >  NC_002947/1582639‑1582932
                                                                                                                                                    |                                                                                                                                                 
aaaTAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGtt                                                                                                                                                   >  2:54763/1‑149 (MQ=255)
   tAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCgg                                                                                                                                                <  5:396131/149‑1 (MQ=255)
           tAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCAACCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGAt                                                                                                                                         >  1:266675/1‑148 (MQ=255)
           tAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCACCGGCAGAGGTGCCCACGGAGCGCTCCCCGCACGCGCTGCGCGTTCGGGCCAGAt                                                                                                                                         >  3:389418/1‑148 (MQ=255)
              ggAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAgg                                                                                                                                     <  6:403168/149‑1 (MQ=255)
              ggAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAgg                                                                                                                                     >  4:125176/1‑149 (MQ=255)
                      cTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTg                                                                                                                             >  6:334758/1‑149 (MQ=255)
                      cTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGATTGATTATCTTATACGATATGCCCCGGCAGATGTGGCCCCGGATCGTTACCCGCACGCGCTTCGCGTTAGGGGCAGATGAGGTTGTACtt                                                                                                                             >  1:319368/1‑148 (MQ=255)
                       ttACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGc                                                                                                                            >  1:50648/1‑149 (MQ=255)
                          cattcattGGTGTTTGTAACTACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCGCTGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGGTGTACTGCCa                                                                                                                          <  6:333538/148‑1 (MQ=255)
                          cATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCAt                                                                                                                         <  6:280039/149‑1 (MQ=255)
                               aTGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTcc                                                                                                                    <  5:334758/149‑1 (MQ=255)
                                  gttgttTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGt                                                                                                                  <  5:114907/148‑1 (MQ=255)
                                   ttgtttgtAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCg                                                                                                                <  7:85351/149‑1 (MQ=255)
                                         gtAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCa                                                                                                           >  5:56028/1‑148 (MQ=255)
                                            aaTACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaag                                                                                                        <  2:50648/148‑1 (MQ=255)
                                            aaTACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGGTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaag                                                                                                        <  3:345729/148‑1 (MQ=255)
                                             aTAGTGCTGCGTGGTACTCAGGTACAGCCTCAGCGCTTTATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaagaa                                                                                                      <  2:166561/149‑1 (MQ=255)
                                             aTACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAaagaa                                                                                                      <  3:125176/149‑1 (MQ=255)
                                                    tgGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGAACGCGCAGCGCGTGCgg                                                                                                                                                >  8:112725/1‑100 (MQ=255)
                                                    tgGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGAACGCGCAGCGCGTGCgg                                                                                                                                                <  7:112725/100‑1 (MQ=255)
                                                      ggtggtACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAg                                                                                             <  4:163109/149‑1 (MQ=255)
                                                      ggtggtACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAg                                                                                             >  3:165083/1‑149 (MQ=255)
                                                           tACTAAGGTACAGCCTCAGCCCTTGATTAGCATTTCCGAGAGGCCCCCGCAGAGGTGCCCCCGGAGCGTTACCCGCACCCGCGGCGCGTTCGGGCCCTATGAGGGTTTAATGCCAAGGTCCGTCGGACCAAAGAAGAACCCCAGGtaaa                                                                                        >  8:165883/1‑148 (MQ=255)
                                                                 ggTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGc                                                                                  >  3:22868/1‑149 (MQ=255)
                                                                     cAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGcc                                                                                 >  5:18993/1‑146 (MQ=255)
                                                                          taaGCACTTGATAATCTTATCCAACAGGCACCGTCAGAGGTGCCACCTGAGCGTTCCCCTCACCCACTTCACCTTCGAGCCAGATGAGCTTCTACTCCCATAATCCCTCGAACCAAAGAAGAAGCCCAAGAAACCCCAGCCAAGatcat                                                                         >  8:290380/3‑149 (MQ=255)
                                                                          tCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAAc                                                                                                             <  6:357402/113‑1 (MQ=255)
                                                                          tCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAAc                                                                                                             >  5:357402/1‑113 (MQ=255)
                                                                          tCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGatcat                                                                         >  6:31010/1‑149 (MQ=255)
                                                                          tCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGatcat                                                                         >  3:403105/1‑149 (MQ=255)
                                                                             gcgcTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGa                                                                      <  2:266675/149‑1 (MQ=255)
                                                                              cgcTTGATTAGCTTATCCGAGAGGCCCCGGAAGAGGTGCCCCGGAGCGTTCCCCGCAAGCGCTGCGCGTTCGTGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGatcat                                                                         <  7:372340/144‑1 (MQ=255)
                                                                              cgcTTGATTAGCTTATACGAGAGGCCCCGGCAGAGGTGCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGTAACCCCGTGACCAGatcatcatat                                                                    >  8:372340/1‑145 (MQ=255)
                                                                                   gATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAggcgg                                                                 <  7:165883/148‑1 (MQ=255)
                                                                                        gCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGa                                                             >  1:50226/1‑147 (MQ=255)
                                                                                         cTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAg                                                          <  6:56028/149‑1 (MQ=255)
                                                                                         cTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAg                                                          <  4:22868/149‑1 (MQ=255)
                                                                                            aTCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAgg                                                         <  2:346382/147‑1 (MQ=255)
                                                                                            aTCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAgg                                                         <  2:351979/147‑1 (MQ=255)
                                                                                               cGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCTATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCtt                                                    >  5:290176/1‑149 (MQ=255)
                                                                                                 agagGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCt                                                  <  1:69875/149‑1 (MQ=255)
                                                                                                   agGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTAc                                                <  4:165083/149‑1 (MQ=255)
                                                                                                    tggcccGTCAGAGGTGCCCCCGGAGCGTTCGCCGCACGAGCTTCGCGTTCGGGCCAGATGATGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCATGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTAc                                                <  7:290380/145‑1 (MQ=255)
                                                                                                           gCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCgg                                        >  8:357727/1‑149 (MQ=255)
                                                                                                                 gTGCCCCCGGAGCGTTCCCCGGACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGcc                                                      <  7:290699/129‑1 (MQ=255)
                                                                                                                 gTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCTCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTgc                                  <  2:319368/149‑1 (MQ=255)
                                                                                                                 gTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAg                                                                              >  2:150258/1‑105 (MQ=255)
                                                                                                                 gTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAg                                                                              <  1:150258/105‑1 (MQ=255)
                                                                                                                       ccGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGcgcgtca                            >  3:218805/1‑146 (MQ=255)
                                                                                                                               ttCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTAc                                                >  3:160586/1‑121 (MQ=255)
                                                                                                                               ttCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTAc                                                <  4:160586/121‑1 (MQ=255)
                                                                                                                                  cccGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCg                 <  7:357727/149‑1 (MQ=255)
                                                                                                                                  cccGAACGCGCAGCGCGTGCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGcc                  >  5:273308/1‑148 (MQ=255)
                                                                                                                                   ccGAACGCGCAGCGCGTGCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGa                >  8:95528/1‑149 (MQ=255)
                                                                                                                                       aCGCGCAGCGCGTGCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATc            <  7:95528/149‑1 (MQ=255)
                                                                                                                                        cgcgCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCg           <  6:18993/149‑1 (MQ=255)
                                                                                                                                          cgcTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGcc         <  4:389418/149‑1 (MQ=255)
                                                                                                                                              gcgcGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAAc     >  7:123668/1‑149 (MQ=255)
                                                                                                                                               cgcgTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCCCCCTGGCCGACATCGCCGAACt    >  6:10253/1‑149 (MQ=255)
                                                                                                                                                 cgTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGCCATCGCCGAACTgg  >  7:368057/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
AAATAGCTTGCTAAGGAATATACTTACATTCATGGTTGTTTGTAAATACTGCTGGGTGGTACTCAGGTACAGCCTCAGCGCTTGATTAGCTTATCCGAGAGGCCCCGGCAGAGGTGCCCCCGGAGCGTTCCCCGCACGCGCTGCGCGTTCGGGCCAGATGAGGTTGTACTGCCATGGTCCGTCGAACCAAAGAAGAAGCCCAGGAAACCCGTGCCCAGATCATCGAGGCGGCGGAAAGGGCCTTCTACAAGCGCGGGGTTGCGCGAACCACCCTGGCCGACATCGCCGAACTGG  >  NC_002947/1582639‑1582932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: