| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,598,831 | C→G | 9.1% | intergenic (‑70/+61) | dctB ← / ← bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,598,831 | 0 | C | G | 9.1% | 226.8 / 12.0 | 77 | intergenic (‑70/+61) | dctB/bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (32/38); new base G (2/5); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.30e-01 | |||||||||||
CCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACC > NC_002947/1598685‑1598973 | ccGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTg < 6:94562/149‑1 (MQ=255)ccGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTg < 4:234751/149‑1 (MQ=255) cGGCGCTGAGTGCGGTACCCAGCAGGATCAGCAGGGTGATCAGCCCCAGACGGAGGGCGCGAAAGGAAAAGGGCATCGGGTGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTTCTCTgc < 6:291175/149‑1 (MQ=255) cGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTgc < 6:129202/149‑1 (MQ=255) ggCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTgca < 5:54779/149‑1 (MQ=255) cTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCAc < 7:14715/149‑1 (MQ=255) aGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCAcc < 1:297961/147‑1 (MQ=255) aGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTg > 2:77387/1‑149 (MQ=255) aGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTg > 2:383616/1‑149 (MQ=255) gTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGt < 7:191183/149‑1 (MQ=255) cGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTGCTGCAGAGTACCTGTAg < 2:30783/148‑1 (MQ=38) ggTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGgc > 5:324338/1‑149 (MQ=37) ggTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGgc < 3:276563/149‑1 (MQ=37) cccAGCCCGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGGGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGCGCTGCAGAGTACCTGTAGGcgcg < 8:361722/148‑1 (MQ=37) ccAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGgcgacgt > 2:341938/1‑145 (MQ=255) cAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGtt > 7:48111/1‑149 (MQ=255) aGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAgg < 5:31208/141‑1 (MQ=255) aGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAgg > 6:31208/1‑141 (MQ=255) cGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGCGGGTTTAcc < 6:324338/149‑1 (MQ=25) tCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCcgc < 4:327653/149‑1 (MQ=255) agcagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCGCCTGTAGGCGCGGGTTTACCcgcg > 3:310160/1‑148 (MQ=255) agcagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCcgcg > 3:367257/1‑148 (MQ=255) gcagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGa > 2:349769/1‑148 (MQ=255) gggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTAcc < 8:65099/140‑1 (MQ=255) gggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTAcc > 7:65099/1‑140 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGaaaa < 6:199645/147‑1 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGaaaa > 5:199645/1‑147 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAgg > 4:215723/1‑149 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAgg > 8:213477/1‑149 (MQ=255) tGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGt < 6:173482/131‑1 (MQ=255) tGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGt > 5:173482/1‑131 (MQ=255) cAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGaa > 5:105322/1‑149 (MQ=255) gCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACa < 6:27951/149‑1 (MQ=255) cccAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAgg < 3:215723/149‑1 (MQ=255) cAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAggcg > 4:79650/1‑149 (MQ=255) gACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTAcac > 6:16508/1‑124 (MQ=255) gACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTAcac < 5:16508/126‑3 (MQ=255) gcgcGAAAGGTAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 3:294817/149‑1 (MQ=255) gcgcGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 8:370058/149‑1 (MQ=255) gAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTc > 1:235844/1‑148 (MQ=255) aaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCaaa < 3:79650/149‑1 (MQ=255) aaaGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAAt < 4:279496/149‑1 (MQ=255) gggCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCAGCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTc > 5:296699/1‑148 (MQ=255) gggCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCa < 1:77387/149‑1 (MQ=255) gCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCaaa < 2:235844/149‑1 (MQ=255) cGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGctc > 3:217230/1‑149 (MQ=255) gggggCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGctc < 4:217230/148‑1 (MQ=255) ggggCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctg < 8:48111/149‑1 (MQ=255) cGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCAcc < 1:383616/149‑1 (MQ=255) gtggtgGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCgc < 5:123575/97‑2 (MQ=255) gtggtgGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCgc > 6:123575/1‑96 (MQ=255) gtggtgGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGc > 8:376504/1‑149 (MQ=255) tggtggGATGTCGGGGCCTGCCTCTTCGCGTGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGcc < 4:310160/149‑1 (MQ=255) tggGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg > 3:65707/1‑149 (MQ=255) tggGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg < 7:213477/149‑1 (MQ=255) tggGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg < 4:367257/149‑1 (MQ=255) gATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa < 6:105322/149‑1 (MQ=255) cGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCCGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCTAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAg > 3:13382/1‑149 (MQ=255) tgcctCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCGTTTTCAGTCAAAGCAATTGAAAGCTCTGCTGGTGCCCCGCCTGGGAATCCAGCCCGAcc > 5:40546/1‑149 (MQ=38) tgcctCTTCGCGGGTAAACCCGCGCCTAAAGCTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAACGCCAGAACAGGCGGCCATTTTAAGTCAAAACAATTCAAAGCTCTGCTGCTGCACCGACAGGGAATCCAGCCCTAcc > 2:372053/1‑149 (MQ=38) gcctCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCt < 1:349769/149‑1 (MQ=255) ctctTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCGTTTTCAGTCAAAGCAATTAAAAGCTCTGCAGCTGCACCGCCAGGGAATCCAGCCCTAccag > 8:346054/1‑146 (MQ=255) tctTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa > 6:298262/1‑133 (MQ=255) tctTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa < 5:298262/133‑1 (MQ=255) cgcgGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGAc < 7:346054/146‑1 (MQ=255) cgcgGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACa < 4:65707/147‑1 (MQ=255) gtgTAAACCCGTGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGaa < 1:341938/147‑1 (MQ=255) ggTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCaaa < 2:141453/100‑1 (MQ=255) ggTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCaaa > 1:141453/1‑100 (MQ=255) ggTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAAc > 2:271439/1‑149 (MQ=255) ggTAAAACCGCGCCTACAGGTGCTGCAGAGTACCTGTAGGCGCGGGTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGaa > 2:3125/1‑148 (MQ=25) ccGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTg > 4:335349/1‑149 (MQ=255) gcCTACAGGTGCTGCAGAGTACCTGTAGGCGCGGGTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTc < 1:3125/149‑1 (MQ=37) cTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAAtt < 1:382896/83‑1 (MQ=255) cTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAAtt > 2:382896/1‑83 (MQ=255) cAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCaa > 6:345477/1‑149 (MQ=255) ggTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCTGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAAcc < 1:372053/149‑1 (MQ=255) ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg > 5:347372/1‑98 (MQ=255) ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg < 6:347372/98‑1 (MQ=255) | CCGGCGCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACTCTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACC > NC_002947/1598685‑1598973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |