| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,652,200 | A→G | 5.2% | intergenic (+119/+42) | PP_1448 → / ← PP_1449 | membrane protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,652,200 | 0 | A | G | 5.2% | 230.4 / 2.1 | 76 | intergenic (+119/+42) | PP_1448/PP_1449 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (33/39); new base G (2/2); total (35/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.88e-01 | |||||||||||
GCGGGGGCTGCACAGGCTGGCTTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCATTTTCCCCAT > NC_002947/1652057‑1652336 | gCGGGGGCTGCACAGGCTGGCTTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTg > 5:266893/1‑149 (MQ=255) gggggCTGCACAGGCTGGCTTGACCTGTAGCGGGCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCAAAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCt < 8:252352/149‑1 (MQ=255) tGCACAGGCTGGCTTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGCGTGTCAGCAGCAGGTCACAAGATTGCTGATATc > 6:24558/1‑149 (MQ=255) cacaGGCTGGCTTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCTCAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATcc < 7:367801/148‑1 (MQ=255) acaGGCTGGCTTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATccc > 3:213016/1‑148 (MQ=255) tggctTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATgg > 1:380931/1‑149 (MQ=255) gACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATcccc > 5:78964/1‑137 (MQ=255) gACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATcccc < 6:78964/137‑1 (MQ=255) ccTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGcc > 8:55680/1‑149 (MQ=255) cTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCcg > 3:13157/1‑149 (MQ=255) tGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCcgc > 8:159491/1‑149 (MQ=255) tGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCACAAGGGCACTGGAATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGAACAAGATTGCTGATATACCCAAAATGCCATGGCcgc > 6:13004/1‑149 (MQ=255) gTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCcgc > 6:303381/1‑148 (MQ=255) tAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCcgcg < 5:143466/148‑1 (MQ=255) tAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCcgc < 4:213016/147‑1 (MQ=255) tAGCGGCAGCTTCGCGGGCAAGCCCGCCACCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCcgc < 6:22604/147‑1 (MQ=255) gCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATg < 5:410563/149‑1 (MQ=255) cGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATcc > 2:346952/1‑126 (MQ=255) cGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATcc < 1:346952/126‑1 (MQ=255) ccTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGt < 2:171154/149‑1 (MQ=255) ctctTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTc < 6:294961/149‑1 (MQ=255) tctTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATgg > 8:129001/1‑144 (MQ=255) tctTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATgg < 7:129001/144‑1 (MQ=255) tctTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCt > 8:257659/1‑149 (MQ=255) gcgGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGt < 5:303381/148‑1 (MQ=255) gcgGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGt < 4:217295/148‑1 (MQ=255) ggCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGctt < 5:387843/149‑1 (MQ=255) aaGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGcttctt < 7:257659/149‑1 (MQ=255) cccccGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGTCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGc < 2:112370/149‑1 (MQ=255) cccccGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGc < 7:159491/149‑1 (MQ=255) ccccGCAGTGAAATCACAAGCGCACGCGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCAGTAGATTGCTGATATCCCGAAATGGCCAGGGACGCGATGGCGTCTTAGTGCTTCTTCCCTTGc < 5:13004/148‑1 (MQ=255) ccccGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCa < 1:201004/149‑1 (MQ=255) gagaAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTTTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGa < 3:246480/149‑1 (MQ=255) gagaAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCg > 2:3301/1‑148 (MQ=255) tCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCa > 3:118832/1‑149 (MQ=255) acaAGCCCAAGGGCTGGGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCGAGGGCCGCGCTGGCGTCTTAGTGCTTCTGCCCTTGGCTGCTCGAAACCCCtt > 8:293305/1‑149 (MQ=255) aaGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGc > 6:228322/1‑149 (MQ=255) cAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCt > 5:193600/1‑149 (MQ=255) aGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGc < 7:164047/149‑1 (MQ=255) tgtgGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTa > 1:275480/1‑149 (MQ=255) tgGTAGTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTAt < 2:115528/148‑1 (MQ=255) ggTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGc > 5:328632/1‑149 (MQ=255) ggTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGc > 7:294004/1‑149 (MQ=255) gTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGcc < 6:31936/149‑1 (MQ=255) ttCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCAc < 6:328632/149‑1 (MQ=255) cGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACt < 2:380931/148‑1 (MQ=255) cGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCATGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTg > 3:342095/1‑149 (MQ=255) gCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAGGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAAc < 5:313712/120‑1 (MQ=255) gCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAGGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAAc < 5:308051/120‑1 (MQ=255) gCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAGGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAAc > 6:308051/1‑120 (MQ=255) gCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAGGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAAc > 6:313712/1‑120 (MQ=255) gCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTg < 7:365705/148‑1 (MQ=255) gAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTtctc > 8:24230/1‑148 (MQ=255) gAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTtctc > 2:68910/1‑148 (MQ=255) gAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCa < 8:294004/149‑1 (MQ=255) aGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAac > 4:348598/1‑149 (MQ=255) aGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAac < 4:13157/149‑1 (MQ=255) cGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAacac < 7:55680/149‑1 (MQ=255) gAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGa > 4:155430/1‑123 (MQ=255) gAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGa < 3:155430/123‑1 (MQ=255) aGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGccc < 6:266893/149‑1 (MQ=255) gCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGGCTATGCCCACTGGTTCTCAACACGCCCAg > 5:363184/1‑149 (MQ=255) gCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAg > 6:249759/1‑149 (MQ=255) cACGCGGCCCGGGTGTCAGCAGCAGGGCACAACATTGCTGATATCCCCAAATGCCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTGCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTAAGCCCACTGGTTCTCACCACGCCCAgg > 5:69456/1‑149 (MQ=255) gcgGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTtctc > 7:383178/1‑134 (MQ=255) gcgGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTtctc < 8:383178/134‑1 (MQ=255) cgGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCa < 2:275480/149‑1 (MQ=255) cgGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCa < 1:68910/149‑1 (MQ=255) cgGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCATGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCa < 4:342095/149‑1 (MQ=255) gCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAgc < 1:3301/149‑1 (MQ=255) ggTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCAtt > 3:151390/1‑149 (MQ=255) tCAGCATCAGGGCACAAGATTGCTGATATCCGCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAAGCCTTTGCTCGCTGCGACTATGCGCACTGGTTCTCATCACGCCCTGGTCCAGCGCATTTTcc < 5:24558/149‑1 (MQ=255) cagcagGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCATTTTCCCCAt < 6:408374/149‑1 (MQ=255) cagcagGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCATTTTCCCCAt > 5:408374/1‑149 (MQ=255) acaAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCAt > 3:356025/1‑131 (MQ=255) acaAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCAt < 4:356025/131‑1 (MQ=255) | GCGGGGGCTGCACAGGCTGGCTTGACCTGTAGCGGCCTCTTCGCGGGCAAGCCCGCCCCCGCAGAGAAATCACAAGCCCAAGGGCTGTGGTATTCGCTGTGGAAGCGGGAGGCACGCGGCCCGGGTGTCAGCAGCAGGGCACAAGATTGCTGATATCCCCAAATGGCCAGGGCCGCGATGGCGTCTTAGTGCTTCTTCCCTTGCATGCTCGAAACCCATTGCTCGCTGCGACTATGCCCACTGGTTCTCAACACGCCCAGGTCCAGCGCATTTTCCCCAT > NC_002947/1652057‑1652336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |