| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,676,163 | C→G | 6.2% | intergenic (+25/‑35) | hom → / → thrC | homoserine dehydrogenase/threonine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,676,163 | 0 | C | G | 6.2% | 261.0 / 6.1 | 81 | intergenic (+25/‑35) | hom/thrC | homoserine dehydrogenase/threonine synthase |
| Reads supporting (aligned to +/- strand): ref base C (42/34); new base G (2/3); total (44/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01 | |||||||||||
CAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGCTT > NC_002947/1676017‑1676310 | cAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcgc < 8:227921/149‑1 (MQ=255)cAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcgc > 8:376471/1‑149 (MQ=255) aaTGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCcgcgcg > 5:312689/1‑149 (MQ=255) aTGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcgg < 1:63795/149‑1 (MQ=255) tGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggc < 6:312689/149‑1 (MQ=255) tGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggc < 8:337035/149‑1 (MQ=255) aTCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggccc > 2:214831/1‑149 (MQ=255) ggTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGCCGTGGTCGGCAAGGGTGGGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGGGcggcccgtcgg < 5:231155/149‑6 (MQ=255) gTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGGCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGcggccccggccc < 7:27889/149‑1 (MQ=255) gTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCGCTGGAAGCCCGGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCGCGGGcggcccgtcgg < 4:257435/148‑6 (MQ=255) aCCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCa < 2:87881/148‑1 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGc > 2:240555/1‑148 (MQ=255) ccATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCa > 4:149743/1‑149 (MQ=255) cGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCCTCGAAg > 5:184727/1‑149 (MQ=255) ggTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGtt > 8:198548/1‑149 (MQ=255) tCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTg > 3:71156/1‑149 (MQ=255) tCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTg > 8:332851/1‑149 (MQ=255) tCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTCTCCGCATACCCGTCGAGCAGCTCAACTAACAAATATAGCCGACGGGCCGCCCGCTCGCCCCCCGCACCACCAACGAAGGttt > 1:407288/1‑148 (MQ=255) gctgcGTATCAATTACCCCATCGTCGCTCTGTAAGCCGTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTAAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCa < 8:377440/144‑1 (MQ=255) cGTATCAATGTCGCCATCGTCGCTCTGGAAGCCCTGCAGTAGGTGGTCGGCATGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCTACTGGCCGGCCGCGGGGACCCGGCCCCAGCATCGATGGTTTGCACGCATg < 8:112287/149‑1 (MQ=255) cGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATg > 7:372008/1‑149 (MQ=255) cGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATg > 2:348251/1‑149 (MQ=255) tATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATgcg > 4:373688/1‑149 (MQ=255) aTCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATgcgc > 7:298290/1‑149 (MQ=255) tCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATgcgc > 7:335657/1‑148 (MQ=255) aTGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGTAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtata > 2:111168/1‑149 (MQ=255) tGACGCCATCGTCGCTCTGTATGCCCTGCAGTACGTGGTCGGCAAGGTTGGGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTatat < 8:335657/149‑1 (MQ=255) tGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTatat < 7:376471/149‑1 (MQ=255) ccGCCATCGTCGCGCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCa < 4:300446/148‑1 (MQ=255) tcgtcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTAccc > 3:393277/1‑149 (MQ=255) gtcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTg > 5:97794/1‑123 (MQ=255) gtcgCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTg < 6:97794/123‑1 (MQ=255) gCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGc > 6:30546/1‑149 (MQ=255) ctctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCAt > 3:333376/1‑126 (MQ=255) ctctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCAt < 4:333376/126‑1 (MQ=255) tctGGAAGCCGTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCa < 1:240555/149‑1 (MQ=255) ctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATgcgc < 7:88488/128‑1 (MQ=255) ctGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATgcgc > 8:88488/1‑128 (MQ=255) tGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCa < 3:149743/147‑1 (MQ=255) ggAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGc > 3:224567/1‑149 (MQ=255) atctccTGCAGGACGTGGTCGGCAAGGTTGTGCCCATTCGCGTCGAGCAGCTAAAATAACAAAAATTGCCTACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCTGTACCCGC‑‑‑GGCCAGGCAc < 2:25909/145‑1 (MQ=255) cTGCAGGACGTGGGCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCAc > 1:25909/1‑144 (MQ=255) gCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCAACGGCCCt > 3:337616/1‑149 (MQ=255) aGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtat > 6:336439/1‑118 (MQ=255) aGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCtat < 5:336439/118‑1 (MQ=255) ggACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGaa > 1:392302/1‑149 (MQ=255) gACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAAt > 1:269060/1‑149 (MQ=255) cGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAAt < 4:203963/141‑1 (MQ=255) cGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAAt > 3:203963/1‑141 (MQ=255) ggCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGAc > 8:385521/1‑149 (MQ=255) ggCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGAc > 1:137812/1‑149 (MQ=255) cAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGt < 4:393277/149‑1 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGtg < 1:214831/149‑1 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGtg < 2:269060/149‑1 (MQ=255) aaGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTCCCGACGGGCCGCCAGCGCGGCCACGGCCCCAGCATCGAAGGGTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GCCCAGGCACCGGCCCTGAATTTCGAAGACGtg > 5:404581/1‑149 (MQ=255) ggTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGtgct < 7:385521/149‑1 (MQ=255) cgTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcctggc < 1:348251/149‑1 (MQ=255) gcagcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGa < 3:373688/149‑1 (MQ=255) gcTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcgg > 1:367873/1‑149 (MQ=255) cTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc > 3:160795/1‑149 (MQ=255) cTCAACAAACAAAAATTCCCGACGGGCCGCCCGCGCGGCCCCGGCCCCACCAGCGAAGGTCTGCACCCATCCGCTATATCAGTACCCCC‑‑‑GGCCAGCCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc < 6:184727/149‑1 (MQ=255) tCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggcg > 3:395703/1‑149 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGtgctgc < 8:284194/123‑1 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGtgctgc > 7:284194/1‑123 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACggcggc > 5:45205/1‑149 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACggcggc > 5:39257/1‑149 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACggcggc < 6:39257/149‑1 (MQ=255) aaCTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACggcggc < 6:45205/149‑1 (MQ=255) tAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTg < 2:137812/149‑1 (MQ=255) aCAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTa < 7:332851/149‑1 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACg > 6:67065/1‑149 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACg > 7:121428/1‑149 (MQ=255) aaaTATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACg > 5:135721/1‑149 (MQ=255) ttGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCg < 8:372008/149‑1 (MQ=255) cGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGaaa < 5:30546/149‑1 (MQ=255) cggggCCGCGCGGGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc > 6:128353/3‑128 (MQ=255) cggggCCGCGCGGGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGAcggc < 5:128353/126‑1 (MQ=255) cggggCCGCGCGGGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAAc > 5:346466/3‑149 (MQ=255) aCGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGCAGGGGCCAGGCACCGGCCCTGAATTTCGAAGACTTGCTGATGGCTGGCGTGGCCAGCGCCGGCGGCCTGTCCGTGCCGGa > 1:330011/1‑148 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCt < 4:148994/149‑1 (MQ=255) gggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCt > 6:221896/1‑149 (MQ=255) ggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcctg > 7:59583/1‑113 (MQ=255) ggCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGctggcctg < 8:59583/113‑1 (MQ=255) gccgccCGCGCGGCCCCGGCCCCCGCGTCGAAGGTTTGGAGCGATGGGCTTGATCAGGACCCGC‑‑‑GGCCAGGCACCGGGCGTGAAGTTGGAAGACGTGCTGCTGGCTGGCCTGGCCGGCGACGGCGGCCGGTACGTGCCGGCAGACCTGc > 4:22134/1‑149 (MQ=255) ccgcccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAAACGTGCTGCTCGCTGCCCTGGCCAGCGACGCCGGCCACTACGTGCCGGAAAACCTGc > 7:348780/1‑148 (MQ=255) gcccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCAc < 4:160795/149‑1 (MQ=255) cccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGCCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACg > 4:46674/1‑149 (MQ=255) accgcGCTGCCCGGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGTCCAGCGACGGCTGCCTGTACGTGCCGGAAAAGCTGCCACg < 4:337616/148‑1 (MQ=255) ccgcGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGc < 6:135721/149‑1 (MQ=255) gcgcgGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGCtt < 7:198548/149‑1 (MQ=255) | CAATGATCCTGGTGACCCATGGCGTGGTCGAGCAGCGTATCAATGACGCCATCGTCGCTCTGGAAGCCCTGCAGGACGTGGTCGGCAAGGTTGTGCGCATTCGCGTCGAGCAGCTCAACTAACAAATATTGCCGACGGGCCGCCCGCGCGGCCCCGGCCCCAGCATCGAAGGTTTGCACCCATGCGCTATATCAGTACCCGC‑‑‑GGCCAGGCACCGGCCCTGAATTTCGAAGACGTGCTGCTGGCTGGCCTGGCCAGCGACGGCGGCCTGTACGTGCCGGAAAACCTGCCACGCTT > NC_002947/1676017‑1676310 |
| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |