| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,822,188 | G→T | 6.5% | intergenic (+30/+28) | PP_mr22 → / ← fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,822,188 | 0 | G | T | 6.5% | 242.6 / 5.4 | 77 | intergenic (+30/+28) | PP_mr22/fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Reads supporting (aligned to +/- strand): ref base G (34/38); new base T (2/3); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.36e-01 | |||||||||||
ATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGAT > NC_002947/1822042‑1822335 | aTGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGaa < 6:314716/149‑1 (MQ=255) gCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCttt > 2:98761/1‑149 (MQ=255) tttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCtttt > 2:349268/1‑148 (MQ=255) ttCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc > 4:319659/1‑149 (MQ=255) tCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTcg > 6:170817/1‑149 (MQ=255) tCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc < 3:349148/148‑1 (MQ=255) aGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTcgc < 3:164669/148‑1 (MQ=255) aGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTcgc < 7:34179/148‑1 (MQ=255) aGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCACGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttgt < 4:71998/148‑4 (MQ=255) gATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGAGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttttgtttt < 5:137724/149‑7 (MQ=255) aGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAACCAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgc > 8:291028/1‑149 (MQ=255) aGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgc > 6:19217/1‑149 (MQ=255) ccAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgcgc > 6:139237/1‑148 (MQ=255) cAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGc > 4:38926/1‑128 (MQ=255) cAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGc < 3:38926/128‑1 (MQ=255) aGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTAt < 7:310528/149‑1 (MQ=255) ggACATCGCAAGAAGCGATTTCATCAGTATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 8:294989/149‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTAt > 5:233278/1‑142 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTAt < 6:233278/142‑1 (MQ=255) aagaagCGATTTCATCAGGATGATGTTTGGGGCAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAg > 5:271360/1‑149 (MQ=255) aagaagCGACTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAg > 7:129595/1‑149 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCg < 3:243510/146‑1 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCg > 4:243510/1‑146 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAAACGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa > 7:281496/1‑133 (MQ=255) gATTTCATAAGGATGATGTTTGGTACAAGCAGGGACTACTGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 8:281496/133‑1 (MQ=255) aTTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCaa < 5:19217/149‑1 (MQ=255) tttCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAAt < 1:98761/149‑1 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCtt < 1:280477/148‑1 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGAGCTCCAGGTCCGCAATCTTg > 8:371839/1‑149 (MQ=255) caGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGc > 4:219145/1‑148 (MQ=255) gatgatGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAgg > 8:158045/1‑149 (MQ=255) atgTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt < 8:129595/148‑1 (MQ=255) tgTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGc < 1:193013/149‑1 (MQ=255) tgTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGc > 8:222688/1‑149 (MQ=255) tttGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTCCCGGAAGGAAAAAAAAAAAGGCCCGAAGGGCATTTTACCCTTATGGGCGGTATCAGCCTTCAAGGACGGAAATATTGCAAGGTTTGca > 3:132978/1‑147 (MQ=255) gggTCAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATc < 6:271360/148‑1 (MQ=255) gggACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATcc > 4:277128/1‑149 (MQ=255) gACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCa > 7:326184/1‑135 (MQ=255) gACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCa < 8:326184/135‑1 (MQ=255) gACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCa > 4:361294/1‑149 (MQ=255) gACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCa < 3:319659/149‑1 (MQ=255) gACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCa < 7:228946/149‑1 (MQ=255) gACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCa < 7:158045/149‑1 (MQ=255) aCAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAACCAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAt < 7:291028/149‑1 (MQ=255) aCAAGCAGGGACTACGGAAAAAAATGTGGGCGGGGCAAACCGCCCCTTTTTTTG‑CCATAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt < 6:305450/149‑1 (MQ=255) aaGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttc < 7:44415/149‑1 (MQ=255) cAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttctt > 5:281029/1‑148 (MQ=255) gggACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAg < 3:361294/149‑1 (MQ=255) ggACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGc > 8:149865/1‑149 (MQ=255) ccTACGGGCAAAAAAAGGGGCGGTTTGACCCGCCCACATTTTTTTCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt > 2:254934/2‑129 (MQ=18) ccTACGGGCAAAAAAAGGGGCGGTTTGACCCGCCCACATTTTTTTCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt < 1:254934/128‑1 (MQ=18) cGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCgg < 6:281029/149‑1 (MQ=255) ggAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCgg > 6:11093/1‑148 (MQ=255) aaaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAgg > 1:136954/1‑149 (MQ=255) aaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTAGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAggg > 2:106928/1‑149 (MQ=255) aaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGc < 5:139237/149‑1 (MQ=255) aTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTc > 2:376717/1‑149 (MQ=255) tgGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCt < 6:375525/148‑1 (MQ=255) tgGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCt < 5:11093/148‑1 (MQ=255) ggCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTa < 7:96871/148‑1 (MQ=255) ggCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTAc < 3:219145/149‑1 (MQ=255) aaaCCGCCCCTTTTTTTGCCAGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGt > 7:58724/1‑148 (MQ=255) aaCCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTTGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGa < 1:106928/149‑1 (MQ=255) cGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGatat > 4:212948/1‑149 (MQ=255) ccccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTa < 2:392751/149‑1 (MQ=255) ccccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTa < 7:222688/149‑1 (MQ=255) cccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg > 3:3110/1‑149 (MQ=255) cccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTcc > 8:183301/1‑149 (MQ=255) cccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTcc > 4:350082/1‑149 (MQ=255) cGTAGGAAAACAAAAAGGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 8:259065/149‑1 (MQ=255) gcgaaaaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCg > 2:211397/4‑117 (MQ=255) gcgaaaaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCg < 1:211397/114‑1 (MQ=255) aCAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGc > 4:136341/1‑149 (MQ=255) gaaaaaGGCCCTTCGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGt > 5:265432/2‑149 (MQ=255) aaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGtt < 4:132978/149‑1 (MQ=255) cccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCg < 2:136954/149‑1 (MQ=255) cGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGAt < 3:212948/149‑1 (MQ=255) | ATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGAT > NC_002947/1822042‑1822335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |