| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,825,091 | G→C | 6.3% | R55G (CGC→GGC) | mutS ← | DNA mismatch repair protein MutS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,825,091 | 0 | G | C | 6.3% | 196.4 / 3.7 | 63 | R55G (CGC→GGC) | mutS | DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): ref base G (28/30); new base C (2/2); total (31/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.54e-01 | |||||||||||
CACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGTGC > NC_002947/1824945‑1825238 | cACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcgg < 1:362389/148‑1 (MQ=255) aCCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcgggc > 5:406102/1‑149 (MQ=255) aCCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcgggc > 4:243295/1‑149 (MQ=255) gggCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGt < 2:112952/149‑1 (MQ=255) ccTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCCCGCGGTCAgt < 7:354019/149‑2 (MQ=255) cTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACGAGCTTGGCCAGGTAGCCTTCGAGCGAATGGAACGGAATCGCGGACATGGGGAGGGACGGGCCGGGCGCCGGACCGCGGGCGGGCAggg > 4:299538/1‑149 (MQ=255) cTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAggg < 3:243295/149‑1 (MQ=255) cTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAggg < 6:406102/149‑1 (MQ=255) ggtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTAGCCGGCCGACTGACCgcgggcg > 6:197575/1‑136 (MQ=255) ggtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTAGCCGGCCGACTGACCgcgggcg < 5:203364/136‑1 (MQ=255) ggtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTAGCCGGCCGACTGACCgcgggcg < 5:197575/136‑1 (MQ=255) ggtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTAGCCGGCCGACTGACCgcgggcg > 6:203364/1‑136 (MQ=255) gtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATc > 4:296058/1‑149 (MQ=255) gCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCcag < 4:101562/149‑1 (MQ=255) ggggTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCcag > 4:336707/1‑147 (MQ=255) ggTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGCTATCACGCAGt > 4:210372/1‑149 (MQ=255) gCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTc < 1:271142/148‑1 (MQ=255) ccGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAATGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgc > 2:80548/1‑149 (MQ=255) cGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgcg > 6:30014/1‑149 (MQ=255) tGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑tt > 3:189440/1‑149 (MQ=255) gCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑ttt > 6:138823/1‑149 (MQ=255) cTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgcg < 4:327812/142‑1 (MQ=255) acaGATCACCACCGACTCGCCGAGCTTGACGAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTc < 3:396419/148‑1 (MQ=255) acaGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑ttttttc > 5:160194/1‑147 (MQ=255) caccGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCg > 2:177718/1‑148 (MQ=255) accGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTa < 4:124904/149‑1 (MQ=255) ccGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTc < 5:131574/137‑1 (MQ=255) ccGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTc > 6:131574/1‑137 (MQ=255) gCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGAtct < 4:189440/149‑1 (MQ=255) gCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCCCGCGGTCAgtc > 8:80295/1‑99 (MQ=255) gCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCCCGCGGTCAgtc < 7:80295/101‑3 (MQ=255) ccGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCTACGAAGAtgcg < 5:30014/149‑4 (MQ=255) ccGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGAtctc > 4:229086/1‑149 (MQ=255) cGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCg > 7:86903/1‑149 (MQ=255) aGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTa < 3:336707/149‑1 (MQ=255) gACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGaa < 5:138823/147‑1 (MQ=255) ccAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCg < 6:45065/149‑1 (MQ=255) cAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGc < 3:296058/149‑1 (MQ=255) cAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGc > 2:341114/1‑149 (MQ=255) gCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGcc > 8:148830/1‑148 (MQ=255) gCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGc < 6:160194/149‑1 (MQ=255) gCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCg > 5:210331/1‑149 (MQ=255) gTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAg > 6:93486/1‑148 (MQ=255) cTTCCAGCGAATGGAATGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATc < 1:80548/149‑1 (MQ=255) ttCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAt > 1:185879/1‑147 (MQ=255) ccAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATCGATGGGAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAt > 1:339639/1‑146 (MQ=255) tGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGTACATCAGCTGGTCCgg < 8:240157/149‑1 (MQ=255) tGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCgg < 6:210331/149‑1 (MQ=255) gAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCTACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑GTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGt > 1:276547/1‑149 (MQ=255) aaTCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGt < 7:148830/149‑1 (MQ=255) ccGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCGGGtttt > 7:108066/1‑148 (MQ=255) catgtgcgggATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCa < 4:284285/142‑1 (MQ=255) acaTGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGc < 1:177718/149‑1 (MQ=255) caTGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGGTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCt < 8:86903/149‑1 (MQ=255) tGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTc < 3:229086/149‑1 (MQ=255) ggggATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTc > 6:151640/1‑148 (MQ=255) gggATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTcc < 5:93486/148‑1 (MQ=255) gtaTGGACTGGCCGGCCGACTGACCGCTGGCGGTCAGCGTGATATCAAGCAGTTTCGCGGCC‑TTTTTCGAATA‑TACGTAGAATATCTCGTAGAAGTCGACCATCAGGTAGAAAATCAGCTGGACCGGTTGCTGATTTTTCAGCTTCCAg > 6:410966/3‑149 (MQ=255) ggATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAg < 3:299538/149‑1 (MQ=255) cTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTActgct < 3:210372/149‑1 (MQ=255) tGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGGCCGGGTGCTGGTTTTTCAGCTTCCAGTActgctg > 6:307576/1‑149 (MQ=255) ggccgACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCa < 4:286455/128‑1 (MQ=255) ggccgACTGACAGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCa > 3:286455/1‑128 (MQ=255) cggtaCCGCGGGCGGTCACTGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCggg < 6:298600/145‑1 (MQ=255) ccTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTTTTAGAAGATATCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTTCTTcataatagtt > 6:286451/2‑145 (MQ=255) cTGACCGCGGGCGTTCTGGGTTATATGCAGCAGTTTCGCGGCC‑TTTTTCGCTTC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCGGGGTGCTg < 4:126152/114‑1 (MQ=255) cTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTg > 3:126152/1‑114 (MQ=255) gACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGgtg > 2:322244/1‑149 (MQ=255) aCCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGgtgt > 2:163358/1‑149 (MQ=255) aCCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGgtgt > 3:354322/1‑149 (MQ=255) cgggaggTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGTGc < 5:410966/149‑1 (MQ=255) | CACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCC‑TTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGTGC > NC_002947/1824945‑1825238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |