Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,859,529 | T→A | 9.1% | intergenic (‑121/+35) | PP_1662 ← / ← PP_1663 | hypothetical protein/hypothetical protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,859,529 | 0 | T | A | 9.1% | 184.4 / 8.3 | 66 | intergenic (‑121/+35) | PP_1662/PP_1663 | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base T (27/33); new base A (2/4); total (29/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.88e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.98e-01 |
AAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTCC > NC_002947/1859383‑1859669 | aaGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTgg > 8:77117/1‑149 (MQ=255) gATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGc < 7:356522/149‑1 (MQ=255) gCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCCCAGTGCgggg < 3:176950/149‑1 (MQ=255) gCGACCGTGTGTCGCACGTCGTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGACGGGCTGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCtt < 6:52234/149‑1 (MQ=255) gCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCCCAGTGCGGGGCtt < 7:49531/149‑1 (MQ=255) gCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCAT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCt > 7:382950/1‑148 (MQ=255) gACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCa > 5:381863/1‑149 (MQ=255) aCAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAg < 7:305599/149‑1 (MQ=255) cAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCCCAGTGCGGGGCttttct < 7:188070/149‑5 (MQ=255) cAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAgg > 6:54038/1‑149 (MQ=255) aGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAgtt < 6:381863/149‑3 (MQ=255) tgtgtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTAt < 5:54038/149‑1 (MQ=255) tgtgtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTAt < 6:83660/149‑1 (MQ=255) tgtCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTg < 2:112746/149‑1 (MQ=255) gCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTTGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTtcagg < 5:285430/149‑1 (MQ=255) ttcttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTgcg > 4:350116/1‑149 (MQ=255) cttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTgcagg < 8:168590/140‑1 (MQ=255) cttTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTgaagg > 7:168590/1‑140 (MQ=255) tttATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGTTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGa < 1:126635/149‑1 (MQ=255) agTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTg < 7:77117/149‑1 (MQ=255) gTTTGTTATCAGACTAAGTAAGTAAAACAGGCATGAAACAAGGTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGc < 6:330668/149‑1 (MQ=255) tttGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGcc > 8:5282/1‑149 (MQ=255) gTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCtt > 6:165395/1‑149 (MQ=255) aGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCGTCAc > 4:217396/1‑149 (MQ=255) gCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCAcc > 8:217370/1‑149 (MQ=255) gCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCAc < 6:244795/148‑1 (MQ=255) gCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCAc > 5:244795/1‑148 (MQ=255) cAGACTAAGTAAGTAAAACAGGCATGAAACAATTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCg < 2:47127/149‑1 (MQ=255) gACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGc > 4:66667/1‑149 (MQ=255) aCTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCt > 4:99132/1‑149 (MQ=255) cTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCtt < 7:88853/149‑1 (MQ=255) agtaagtaAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGcc < 3:99132/149‑1 (MQ=255) agtaaAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATc < 7:5282/148‑1 (MQ=255) aaaCAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCg > 5:133088/1‑149 (MQ=255) aCAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTg < 6:133088/149‑1 (MQ=255) aGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTg < 5:374292/99‑1 (MQ=255) aGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTg > 6:374292/1‑99 (MQ=255) aGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGc > 6:149609/1‑148 (MQ=255) gCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCAt < 5:165395/149‑1 (MQ=255) cATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATc < 7:62671/149‑1 (MQ=255) aaCAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCTTTCACCGGCTTGCCATCGACCGTGCCATCCTgca < 3:350116/149‑1 (MQ=255) aCAAGTTTCATGAAGCTCGAAGGGATGCTGCCTGGGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTg > 1:60348/1‑147 (MQ=255) aCAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcag < 8:382950/149‑1 (MQ=255) cAAGTTTCATGAAGCTCTAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcagc < 5:149609/149‑1 (MQ=255) cAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcag > 5:234111/1‑148 (MQ=255) gTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGTCGGGTCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACg < 7:234923/149‑1 (MQ=255) tttCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGa > 1:127833/1‑149 (MQ=255) aTGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATca < 6:234111/148‑1 (MQ=255) gAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATcaca > 7:268254/1‑148 (MQ=255) aGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATAc < 2:60348/149‑1 (MQ=255) gAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt > 8:89929/1‑149 (MQ=255) gAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCtt < 8:268254/149‑1 (MQ=255) gtgggCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCg > 2:351791/1‑139 (MQ=255) gtgggCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCg < 1:351791/139‑1 (MQ=255) tgggCTTTTTCGCAGCAAAGAAAAGCTCCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCt > 1:4670/1‑149 (MQ=255) ggCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTgg < 7:217370/148‑1 (MQ=255) cTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGgcgc < 2:4670/149‑1 (MQ=255) caAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCAc < 5:111956/146‑1 (MQ=255) caAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCAc > 6:111956/1‑146 (MQ=255) aaaGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGACATCGGTCTCTACCTGGCGCAGTTGCACcag > 8:239495/1‑148 (MQ=255) aGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACcagcag > 4:178250/1‑149 (MQ=255) gC‑CCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcagca < 4:77007/91‑1 (MQ=255) gC‑CCCGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTgcagca > 3:77007/1‑91 (MQ=255) cccGCCCAGTGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTcc > 2:225059/1‑148 (MQ=255) aCTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATc < 5:133475/64‑1 (MQ=255) aCTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATc > 6:133475/1‑64 (MQ=255) | AAGATGGCTGCGACAGTGTGTCGCACGTCTTCTTTATAGAGTTTGTTAGCAGACTAAGTAAGTAAAACAGGCATGAAACAAGTTTCATGAAGCTCGAAGGGATGCTGCCT‑GGGTGGGCTTTTTCGCAGCAAAGAAAAGC‑CCCGCACTGGGCGGGGCTTCAGGTATTGCAGGCAGTGCGCGATCAGTTGCCCTTCACCGGCTTGCCATCGACCGTGCCATCCTGCAGCACGATCACATACTCCTTGCCATCGGTCTCTACCTGGCGCAGTTGCACCAGCAGGTAGTCC > NC_002947/1859383‑1859669 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |