| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,893,946 | T→A | 9.8% | R24R (CGT→CGA) ‡ | PP_1699 → | 2‑pyrone‑4,6‑dicarboxylic acid hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,893,946 | 0 | T | A | 9.8% | 232.5 / 14.5 | 92 | R24R (CGT→CGA) ‡ | PP_1699 | 2‑pyrone‑4,6‑dicarboxylic acid hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (43/40); new base A (5/4); total (48/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.95e-02 | |||||||||||
CCGTGGCCGCAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTACCTGCTCA > NC_002947/1893799‑1894094 | ccGTGGCCGCAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTg < 1:117386/149‑1 (MQ=255) cGTGGCCGCAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTgg < 4:248544/149‑1 (MQ=255) gTGGCCGCAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTggg > 7:184804/1‑149 (MQ=255) tGGCCGCAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGc > 8:286671/1‑149 (MQ=255) gCAACCTTTAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCTACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAAc > 7:266098/1‑149 (MQ=255) cAACCTTGTATGTGCTCCTGCGGCGGAAAGGGCCGGTGCGGTGGCCAAGTAACCTGAACCTGTTTGTATGTGAACCATGCGCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCGCACGTGTTCAGCCCACGGCTGAAca < 8:236184/149‑2 (MQ=255) cAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCCACGGCTGAAca < 8:229987/149‑2 (MQ=255) cTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGgc < 2:179376/149‑1 (MQ=255) ttGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGgc > 6:201941/1‑148 (MQ=255) gAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCCACGGCTGAAc > 4:293267/1‑141 (MQ=255) gAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCCACGGCTGAAc < 3:293267/141‑1 (MQ=255) tGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCcagccagc > 5:256883/1‑149 (MQ=255) ccTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAgcggcg < 8:9180/149‑1 (MQ=255) cTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGt < 7:286671/149‑1 (MQ=255) cGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATgcg > 7:321397/1‑149 (MQ=255) ggCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATgc < 1:52930/141‑1 (MQ=255) ggCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATgc > 2:52930/1‑141 (MQ=255) ccGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTCTTCAGCCGTGGGCTGCACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTAc > 3:17304/1‑149 (MQ=255) ccGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATgc < 4:393087/148‑1 (MQ=255) cAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTgg > 2:6120/1‑149 (MQ=255) cAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTgg < 6:245775/149‑1 (MQ=255) cAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTgg > 6:246855/1‑149 (MQ=255) aaGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTg > 4:282680/1‑94 (MQ=255) aaGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTg < 3:282680/94‑1 (MQ=255) aaGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGACGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTggg > 7:244934/1‑149 (MQ=255) aGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGc < 5:47885/149‑1 (MQ=255) gTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGc > 5:279089/1‑148 (MQ=255) cctgTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTggg > 3:213637/1‑149 (MQ=255) cctgTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTggg > 2:247444/1‑149 (MQ=255) tgTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGCCAGCCACGCCCACGTGTTCAGACGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGc > 1:102466/1‑148 (MQ=255) tGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAAc < 5:68173/148‑1 (MQ=255) tATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGc > 4:23007/1‑149 (MQ=255) aTGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCg > 7:233815/1‑149 (MQ=255) tGAGAACCATGCCCGACTCACCCGATTTGCACCTGACTGCCATCGACAGCCAAGCCCACGTGTTCATCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCg < 6:349526/148‑1 (MQ=255) tGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCgg > 3:55482/1‑149 (MQ=255) ccGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAgcggc > 3:121099/1‑84 (MQ=255) ccGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAgcggc < 4:121099/84‑1 (MQ=255) ccGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATgcgc > 8:177193/1‑108 (MQ=255) ccGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATgcgc < 7:177193/108‑1 (MQ=255) ccGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGCCTACCTGGGCCAACTGCGGGCCCATGGttt > 7:164428/1‑148 (MQ=255) ccGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTc < 4:213637/149‑1 (MQ=255) cGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCa < 7:162125/149‑1 (MQ=255) gACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTc < 6:393283/147‑1 (MQ=255) gACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTc > 5:393283/1‑147 (MQ=255) gACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAg < 1:2264/149‑1 (MQ=255) gACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAg > 3:321196/1‑149 (MQ=255) gACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAg < 1:8765/149‑1 (MQ=255) aCCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATg > 1:171335/1‑149 (MQ=255) aCCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATg > 3:3776/1‑149 (MQ=255) aCCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCAAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATg < 1:247444/149‑1 (MQ=255) cccGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGc > 4:289830/1‑120 (MQ=255) cccGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGc < 3:289830/120‑1 (MQ=255) cggCTTTGCATCTGACTGCCATCGACAGCCACTCCCACGTGTTCAGCCGTTGGCTGAACCTGGCCTGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGc < 4:321196/147‑1 (MQ=255) ccGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCTGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGc < 2:171335/149‑1 (MQ=255) ccGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGc < 8:321397/149‑1 (MQ=255) cGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCg > 4:258154/1‑149 (MQ=255) tGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCa < 8:299241/135‑1 (MQ=255) tGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCa > 7:299241/1‑135 (MQ=255) tGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTAc < 3:258154/147‑1 (MQ=255) tGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACt < 6:279089/148‑1 (MQ=255) gCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTg < 6:256883/148‑1 (MQ=255) ccATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTccagcccagc < 8:233815/149‑1 (MQ=255) cATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCt > 7:323359/1‑149 (MQ=255) cATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCt > 3:363582/1‑149 (MQ=255) cGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTcc > 6:358755/1‑149 (MQ=255) ccAGCCACGCCCACGTGTTCAGCCGTGGGCGGAACCTGGCCAGCCAGCGGCTTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTg < 8:184804/148‑1 (MQ=255) aCAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTg > 3:221845/1‑149 (MQ=255) aCAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTg > 5:371014/1‑149 (MQ=255) cAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTgg < 4:3776/149‑1 (MQ=255) cAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTgg < 5:246855/149‑1 (MQ=255) cAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTg < 4:221845/148‑1 (MQ=255) cAGCCACGCCCACCTGTTCAGCCGTGGGCTGAACCTGGCAAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTgg < 8:266098/149‑1 (MQ=255) gCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGt < 3:23007/149‑1 (MQ=255) ccACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTccagcccag < 6:334325/138‑1 (MQ=255) ccACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTccagcccag > 5:334325/1‑138 (MQ=255) cACGCCCACGTGTTCAGCCATGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTAc < 4:353036/149‑1 (MQ=255) aCGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTAc < 8:24681/148‑1 (MQ=255) aCGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTAc > 7:24681/1‑148 (MQ=255) tggccaggtTCAGCCCACGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTg < 7:124128/133‑1 (MQ=255) tggccaggtTCAGCCCACGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTg > 8:124128/8‑140 (MQ=255) ccACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGAc > 4:112426/1‑148 (MQ=255) aCGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAAc > 2:87171/1‑149 (MQ=255) caggtTCAGCCCACGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAAcc > 7:226799/4‑149 (MQ=255) caggtTCAGCCCACGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAAcc > 6:265412/4‑149 (MQ=255) caggtTCAGCCCACGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAAcc > 2:376045/4‑149 (MQ=255) gtTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTc > 7:245753/1‑118 (MQ=255) gtTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTc < 8:245753/118‑1 (MQ=255) gtTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGc > 8:160348/1‑148 (MQ=255) ttCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTa > 6:156355/1‑149 (MQ=255) aGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTACCt > 1:183593/1‑149 (MQ=255) ccGTGGGCTGAACCTGGCCAGCCAGCGGCGTTACGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTACCTGc > 6:385444/1‑149 (MQ=255) cGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTACCTGCt < 7:160348/149‑1 (MQ=255) tGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTACCTGCTCa < 4:55482/149‑1 (MQ=255) | CCGTGGCCGCAACCTTGAATCTGCACCTGCGCCGGAAACGGCCGGTGCCGTCGCCAAGTAACCTGAACCTGTTTGTATGAGAACCATGCCCGACGCACCCGCTTTGCACCTGACTGCCATCGACAGCCACGCCCACGTGTTCAGCCGTGGGCTGAACCTGGCCAGCCAGCGGCGTTATGCGCCCAACTACGATGCGCCGCTGGGCGACTACCTGGGCCAACTGCGGGCCCATGGTTTCAGCCATGGCGTACTGGTCCAGCCCAGCTTCCTGGGTACCGACAACCGCTACCTGCTCA > NC_002947/1893799‑1894094 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |