Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,951,839 G→C 5.8% P568A (CCT→GCT) ‡ mnmC ← methyltransferase/FAD‑dependent oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,951,8390GC 5.8% 278.0 / 6.7 86P568A (CCT→GCT) ‡mnmCmethyltransferase/FAD‑dependent oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (40/41);  new base C (3/2);  total (43/43)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.85e-01

CTCAACGGTGCCGTGATCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGCCCTGGTGCTCGG  >  NC_002947/1951691‑1951985
                                                                                                                                                    |                                                                                                                                                  
cTCAACGGTGCCGTGATCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAgg                                                                                                                                                    >  4:113570/1‑149 (MQ=255)
           cGTGATCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCCCTATCGCcgacgcgca                                                                                                                                         <  3:7445/149‑5 (MQ=255)
             tGATCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCgg                                                                                                                                        <  5:407652/148‑1 (MQ=255)
             tGATCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCgg                                                                                                                                        >  6:407652/1‑148 (MQ=255)
               aTCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCa                                                                                                                                      <  4:56005/148‑1 (MQ=255)
               aTCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCAAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCGGGCCCAGTTCTGCATAGGCTTCGGCAAACGCCTGCACGTCGGCGATAGGGCCGACGATCGGCa                                                                                                                                      <  1:104735/148‑1 (MQ=255)
                tCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCcgac                                                                                                                                              <  4:297254/139‑1 (MQ=255)
                tCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCcgac                                                                                                                                              >  3:297254/1‑139 (MQ=255)
                tCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAgg                                                                                                                                    <  1:137475/149‑1 (MQ=255)
                  aaCCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCTAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGTTCGGCAGGt                                                                                                                                   >  7:16506/1‑148 (MQ=255)
                  aaCCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGt                                                                                                                                   >  4:46557/1‑148 (MQ=255)
                    cccGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAAt                                                                                                                                >  6:312560/1‑149 (MQ=255)
                     ccGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATc                                                                                                                               >  7:237252/1‑149 (MQ=255)
                          tGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGc                                                                                                                          <  6:214502/149‑1 (MQ=255)
                             gCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCa                                                                                                                                      >  1:394605/1‑134 (MQ=255)
                             gCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCa                                                                                                                                      <  2:394605/134‑1 (MQ=255)
                              ccATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGt                                                                                                                      >  4:269185/1‑149 (MQ=255)
                              ccATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGt                                                                                                                      <  5:199632/149‑1 (MQ=255)
                                    ccGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCGACg                                                                                                                >  3:14301/1‑149 (MQ=255)
                                            cacaTCCACCCCGCCCACCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACgca                                                                                                         <  8:286240/148‑1 (MQ=255)
                                             acaTACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCTAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGTTCGGCAGGTAATCCGGGCTGGTGCAACGGAACgcagc                                                                                                       <  8:16506/149‑1 (MQ=255)
                                              caTACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGc                                                                                                                                       >  4:131258/1‑116 (MQ=255)
                                              caTACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGc                                                                                                                                       <  3:131258/116‑1 (MQ=255)
                                              caTACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACgcagc                                                                                                       <  3:113570/148‑1 (MQ=255)
                                               aTACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCAc                                                                                                     >  5:330520/1‑149 (MQ=255)
                                                tACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGAGAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACg                                                                                                    >  4:325796/1‑149 (MQ=255)
                                                atcAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACg                                                                                                    <  5:414318/147‑1 (MQ=255)
                                                   aaCCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGt                                                                                                                      >  8:154041/1‑128 (MQ=255)
                                                   aaCCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGt                                                                                                                      <  7:154041/128‑1 (MQ=255)
                                                   aaCCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTcc                                                                                                 >  6:166640/1‑149 (MQ=255)
                                                   aaCCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTcc                                                                                                 <  2:124861/149‑1 (MQ=255)
                                                     cccGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCt                                                                                               <  8:270476/149‑1 (MQ=255)
                                                      ccGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTg                                                                                              >  3:100430/1‑149 (MQ=255)
                                                        gCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGc                                                                                             >  6:145230/1‑148 (MQ=255)
                                                              ccAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAg                                                                                                                                     <  2:297741/102‑1 (MQ=255)
                                                              ccAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAg                                                                                                                                     >  1:297741/1‑102 (MQ=255)
                                                                aatggcagggcaCATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCTTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGTCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCg                                                                                    <  6:175596/146‑1 (MQ=255)
                                                                aaGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCa                                                                                                                                      <  4:349151/99‑1 (MQ=255)
                                                                aaGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCa                                                                                                                                      >  3:349151/1‑99 (MQ=255)
                                                                aaGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCg                                                                                    <  6:352077/149‑1 (MQ=255)
                                                                aaGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCg                                                                                    >  2:302604/1‑149 (MQ=255)
                                                                aaGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCg                                                                                    <  3:46557/149‑1 (MQ=255)
                                                                   ggcaggtcaAATCGGTTAATTGCCGCGCATCCCGTCCCATTACTGCATAGGATTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCggg                                                                                  <  6:271950/148‑1 (MQ=255)
                                                                    gcagggcaCATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCAGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCCCGTCCCTGCAATTGCTCGGGGt                                                                                >  4:364398/1‑149 (MQ=255)
                                                                       gggcaCATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCa                                                                             <  8:237252/149‑1 (MQ=255)
                                                                        ggcaCATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCGACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAg                                                                            <  4:14301/149‑1 (MQ=255)
                                                                        ggcaCATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAAtt                                                                                         <  7:373741/136‑1 (MQ=255)
                                                                        ggcaCATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAg                                                                            >  4:326759/1‑149 (MQ=255)
                                                                           acaTCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGtt                                                                          >  4:343539/1‑148 (MQ=255)
                                                                            caTCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTca                                                                        <  4:124351/149‑1 (MQ=255)
                                                                              tCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTcagc                                                                      >  7:267592/1‑149 (MQ=255)
                                                                                 ggTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTcagccac                                                                   <  7:291639/149‑1 (MQ=255)
                                                                                         ccGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACagccagcc                                                           <  1:302604/149‑1 (MQ=255)
                                                                                         ccGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACagccagcc                                                           >  1:170921/1‑149 (MQ=255)
                                                                                               aTCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTgcg                                                     >  5:174596/1‑149 (MQ=255)
                                                                                                 cccGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTc                                                                                     >  8:325697/1‑115 (MQ=255)
                                                                                                 cccGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTc                                                                                     <  7:325697/115‑1 (MQ=255)
                                                                                                   cGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTgcgc                                                    >  7:375061/1‑146 (MQ=255)
                                                                                                   cGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTgcgc                                                    >  2:391246/1‑146 (MQ=255)
                                                                                                       ccAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATc                                                                                                                                          <  8:270456/56‑1 (MQ=255)
                                                                                                       ccAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATc                                                                                                                                          >  7:270456/1‑56 (MQ=255)
                                                                                                       ccAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTgcgc                                                    >  7:330113/1‑142 (MQ=255)
                                                                                                       ccAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTgcgc                                                    <  8:330113/142‑1 (MQ=255)
                                                                                                       ccAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATc                                              >  2:125464/1‑148 (MQ=255)
                                                                                                        cAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGa                                            >  1:235007/1‑149 (MQ=255)
                                                                                                         aGTACGGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGAc                                           <  3:325796/149‑1 (MQ=255)
                                                                                                           tACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTGCAGCCACAGCCAGCCGTTGCGCCAGATCGACgg                                         <  6:186642/149‑1 (MQ=255)
                                                                                                                cATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGaaagt                                    >  3:299776/1‑147 (MQ=255)
                                                                                                                cATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAAtt                                    >  1:354472/1‑149 (MQ=255)
                                                                                                                     gCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTc                               <  5:312560/149‑1 (MQ=255)
                                                                                                                     gCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTc                               <  4:100430/149‑1 (MQ=255)
                                                                                                                      ctgctgCAAACGCATGCGCTTCGGCGTTCGGGCCGACGATCGGCAGTTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTcc                              <  4:299776/144‑1 (MQ=255)
                                                                                                                           gCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCcagcag                         >  5:345957/1‑149 (MQ=255)
                                                                                                                            cAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCagcagc                        >  6:337815/1‑149 (MQ=255)
                                                                                                                            cAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCCGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCagcagc                        >  2:233178/1‑149 (MQ=255)
                                                                                                                             aaaCGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCg                                                          <  3:69846/114‑1 (MQ=255)
                                                                                                                             aaaCGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCg                                                          >  4:69846/1‑114 (MQ=255)
                                                                                                                              aaCGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAgcgc                      <  8:267592/149‑1 (MQ=255)
                                                                                                                                 tgccgatcgTCGGCCCTATCGCCGACGATCGGCAGGTAATCCGGGCTTGTGCAACGGAACGCACCACGTCCCTGCAATTGCTCGGGGTCCAGGTCAGCCCCACCCAGCCGTTGCGCCATATCGACGGATATTTAGTCCAGCAGCGCCAg                   >  4:280164/8‑149 (MQ=255)
                                                                                                                                    cgatcgTCGGCCCTATCGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTca                                                                        <  4:326328/89‑1 (MQ=38)
                                                                                                                                    cgatcgTCGGCCCTATCGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTca                                                                        >  3:326328/5‑93 (MQ=38)
                                                                                                                                      atcgTCGGCCCTATCGCCGACGATCGGAAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTAAGCCCCAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGCTTGc              >  7:267949/3‑149 (MQ=255)
                                                                                                                                       gcgTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGcc             <  1:391246/149‑1 (MQ=255)
                                                                                                                                        cgTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGccc            >  3:169917/1‑149 (MQ=255)
                                                                                                                                          tCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGCCCTg          <  5:337815/149‑1 (MQ=255)
                                                                                                                                           cGGCGATAGGGCCGACGATCGGCAGGTAATCCTGGCTGGTGCAACGGAACGCAGCAAGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTTCGCAAGATCGACGGAAATTTCTTCCAGCAGCGCCAGGTTGCCCTgc         >  8:377366/1‑148 (MQ=255)
                                                                                                                                                 tAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGCCCTGGTGCTCg   <  2:235007/149‑1 (MQ=255)
                                                                                                                                                   gggCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGCCCTGGTGCTCgg  <  5:166640/148‑1 (MQ=255)
                                                                                                                                                   gggCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGCCCTGGTGCTCgg  <  2:170921/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CTCAACGGTGCCGTGATCAACCCGCGTGAGCCATGCCCGCTGTTCACATACAACCCGCCCAGCCAAGGGCAGGGCACATCCGGTACTTGCCGCGCATCCCGGCCCAGTACTGCATAGGCTTCGGCAAACGCCTGCGCGTCGGCGATAGGGCCGACGATCGGCAGGTAATCCGGGCTGGTGCAACGGAACGCAGCACGTCCCTGCAATTGCTCGGGGTCCAGTTCAGCCACAGCCAGCCGTTGCGCCAGATCGACGGAAATTTCGTCCAGCAGCGCCAGGTTGCCCTGGTGCTCGG  >  NC_002947/1951691‑1951985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑