Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,007,239 | T→C | 5.4% | Q41Q (CAA→CAG) | PP_1790 ← | acylneuraminate cytidylyltransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,007,239 | 0 | T | C | 5.4% | 280.0 / 4.4 | 93 | Q41Q (CAA→CAG) | PP_1790 | acylneuraminate cytidylyltransferase |
Reads supporting (aligned to +/- strand): ref base T (36/52); new base C (2/3); total (38/55) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 |
ACTGGTCAGTGCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCTTTGGC > NC_002947/2007091‑2007386 | aCTGGTCAGTGCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGt < 2:310021/149‑1 (MQ=255) gTCAGTGCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGc < 5:35679/148‑1 (MQ=255) gTCAGTGCTGGTCTGGCTGGAAGATAGGGCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAACCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGGGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGc < 4:359364/148‑1 (MQ=255) tCAGTGCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCtt < 8:221332/149‑1 (MQ=255) tCAGTGCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCtt < 7:241384/149‑1 (MQ=255) gCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACt > 5:151156/1‑149 (MQ=255) cTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACtt < 5:301211/149‑1 (MQ=255) cTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAACTGCTTCaagca < 6:414435/149‑4 (MQ=255) tCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGAGTAGTCAAGGATGCTTACGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGAtt < 7:159304/149‑1 (MQ=255) ctggAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaat < 6:373974/149‑1 (MQ=255) taaGATTGGTCTTCTCGTCGCTTATTATGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTGAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaatcaa < 8:103818/148‑1 (MQ=255) gAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaatcaa < 8:98092/149‑1 (MQ=255) gAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaatc < 2:36717/147‑1 (MQ=255) aaGATAGGTCTTCTCGTCGCTTTTGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAg < 3:49366/149‑1 (MQ=255) aGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGAtt < 3:13834/135‑1 (MQ=255) aGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGAtt > 4:13834/1‑135 (MQ=255) aGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGaa > 6:302366/1‑149 (MQ=255) aGGTCTTCTCCACGCTTATGAAGAATGATATTATTATTTTGAAGCCATGAGGCGTAGTCAAGCATGCTATCGTCTTATGAGCTCATTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTTCTTCAACTTCATATCAATCAATCCGa > 6:231121/1‑148 (MQ=255) tcttctCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAAt > 1:194030/1‑147 (MQ=255) ctcGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTgg > 8:78603/1‑149 (MQ=255) tagtgggttATGAAGTTTGTTTTTATTATTTTGAAGCGATTTGTCGTAGTCAAGGTTGCTTTCTTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTgg < 7:193822/141‑1 (MQ=255) gtcgCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTgg < 4:97201/146‑1 (MQ=255) gtcgCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTAAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTTgccg < 8:286578/149‑1 (MQ=255) cgCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCTTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaat < 6:28799/128‑1 (MQ=255) cgCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTAAACTTGATTtcaat > 5:28799/1‑128 (MQ=255) ttATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaat < 5:62203/125‑1 (MQ=255) ttATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTtcaat > 6:62203/1‑125 (MQ=255) tGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACTATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATgg < 8:255899/149‑1 (MQ=255) gAAGTTTGATTTTATTATTTTGAAGCGATGCGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGgcc > 7:132946/1‑139 (MQ=255) gAAGTTTGATTTTATTATTTTGAAGCGATGCGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGgcc < 8:132946/139‑1 (MQ=255) gAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCg > 3:253907/1‑134 (MQ=255) gAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCg < 4:253907/134‑1 (MQ=255) gAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATgg < 2:406334/148‑1 (MQ=255) gAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGt > 4:4194/1‑149 (MQ=255) tattttGATTTTTTTATTTTGAAGCTATGATGAGTAGGCATGGATGCTTTCTTCGTTGGTGCTCAGTACGATGTAATCTACAGCGTCTGCTTGAAGCTTTTGGTTCTACTTGATTTTAATCAAGCCGAATTCGTGGCCGCGAAATGGt < 5:231121/145‑1 (MQ=255) aaGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGt < 5:290458/148‑1 (MQ=255) tgtttatttttATAATTTT‑AATCGTTGATGCCTATTCAATGATGCTTTGGTCCTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGtttt < 5:225201/142‑1 (MQ=255) aGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGttt < 7:162443/149‑1 (MQ=255) gTTTGATTTTATTATTTTTAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGtttt < 7:255168/149‑1 (MQ=255) tttGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTta > 1:153372/1‑149 (MQ=255) gATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTtata < 3:72917/148‑1 (MQ=255) ttttATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATAttt > 5:225162/1‑149 (MQ=255) ttattTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTAtt > 8:162478/1‑149 (MQ=255) ttattTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTAtt > 3:119764/1‑149 (MQ=255) attTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGTATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTc < 2:253908/148‑1 (MQ=255) attTTGAAGCGATGAGGCGTAGGCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTc < 4:302591/148‑1 (MQ=255) ttttGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATAtttt > 8:133069/1‑142 (MQ=255) ttttGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATAtttt < 7:133069/142‑1 (MQ=255) tttGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCgg > 7:15748/1‑148 (MQ=255) tGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAAt > 3:176029/1‑149 (MQ=255) gAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAAt < 8:15748/148‑1 (MQ=255) ggCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGc < 7:78603/149‑1 (MQ=255) gCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGt < 7:290959/141‑1 (MQ=255) gCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGt > 8:290959/1‑141 (MQ=255) tAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCttt < 4:359339/149‑1 (MQ=255) aGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCtttt > 1:360952/1‑149 (MQ=255) gTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCtttt < 3:213840/148‑1 (MQ=255) aTGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCggcaggg < 6:225162/149‑1 (MQ=255) tttCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCggcagggcag > 7:270690/1‑148 (MQ=255) tttCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCggcagggcag > 7:324884/1‑148 (MQ=255) cgtcgtTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGaaa < 3:4194/148‑1 (MQ=255) gtcgtTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAac < 2:360952/149‑1 (MQ=255) cTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTc > 4:229855/1‑113 (MQ=255) cTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTc < 3:229855/113‑1 (MQ=255) cAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGtttttt < 2:194030/149‑1 (MQ=255) aGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGtttttt < 8:270690/148‑1 (MQ=255) aGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGtttttt > 1:213840/1‑148 (MQ=255) aGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGttttt < 5:302366/147‑1 (MQ=255) tACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCat < 6:151156/149‑1 (MQ=255) tACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCa > 1:94748/1‑148 (MQ=255) cGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCatat < 8:324884/149‑1 (MQ=255) gATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatt > 6:14313/1‑149 (MQ=255) gATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatt > 7:286296/1‑149 (MQ=255) aTGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatt > 3:178231/1‑148 (MQ=255) tGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATattt > 4:165084/1‑148 (MQ=255) aaTCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatttcat < 7:162478/148‑1 (MQ=255) aTCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatttcatt > 2:308815/1‑148 (MQ=255) tCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCa < 6:102056/138‑1 (MQ=255) tCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCa > 5:102056/1‑138 (MQ=255) aaCAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAg > 3:114241/1‑149 (MQ=255) aGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTgg < 4:119764/149‑1 (MQ=255) tCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCTGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCa > 7:136855/1‑149 (MQ=255) caagttGAAGCAACTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTgg > 5:361212/5‑144 (MQ=255) caagttGAAGCAACTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTgg < 6:361212/140‑1 (MQ=255) tGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCAAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCAt > 1:313683/1‑148 (MQ=255) aagttGAAGCAACTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatttca < 8:195438/131‑1 (MQ=255) aagttGAAGCAACTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATatttca > 7:195438/4‑134 (MQ=255) cTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATaaa > 2:67032/1‑149 (MQ=255) gAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGc > 1:408684/1‑149 (MQ=255) aGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCtt < 2:94748/149‑1 (MQ=255) gCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCttt < 8:136855/149‑1 (MQ=255) gCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCttt < 5:364498/149‑1 (MQ=255) gCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCttt < 7:357979/149‑1 (MQ=255) gTTGCTTCAACTTGATTTCAATCAAGCAGAATTCGTTGACTCCAAATTGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCTTTGGc < 8:179713/149‑1 (MQ=255) ttGCTTCAACTTGTTTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATaaa < 8:265588/139‑1 (MQ=255) ttGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATaaa < 8:265590/139‑1 (MQ=255) ttGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATaaa > 7:265590/1‑139 (MQ=255) | ACTGGTCAGTGCTGGTCTGGCTGGAAGATAGGTCTTCTCGTCGCTTATGAAGTTTGATTTTATTATTTTGAAGCGATGAGGCGTAGTCAAGGATGCTTTCGTCGTTGGTGCTCAGTACGATGGAATCAACAGCGTCTGCTTGAAGCAGTTGCTTCAACTTGATTTCAATCAAGCCGAATTCGTGGCCGCCAAATGGTTTTATATTTTTATTCGGAATGCGTTCGCTGCCTTTTCGGCAGGGCAGAAAACACGTCGTTTTTTCATATTTCATTTCAGTGGCCCATAAACGCTTTGGC > NC_002947/2007091‑2007386 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |