| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,054,324 | G→C | 5.4% | A101G (GCC→GGC) | PP_1829 ← | alpha/beta family hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,054,324 | 0 | G | C | 5.4% | 244.0 / 3.2 | 74 | A101G (GCC→GGC) | PP_1829 | alpha/beta family hydrolase |
| Reads supporting (aligned to +/- strand): ref base G (32/38); new base C (2/2); total (34/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.57e-01 | |||||||||||
GCTGGCAATCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGCAC > NC_002947/2054176‑2054469 | gCTGGCAATCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGctggctgg > 8:326270/1‑149 (MQ=255) gCAATCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTggcggc > 3:365825/1‑149 (MQ=255) gCAATCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTggcg < 3:163414/147‑1 (MQ=255) gCAATCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGACGAAGCGCGGGTCGGCTTTGAGATTGCGGCACCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTggcgcc > 2:361549/1‑147 (MQ=255) aTCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGCCAGCCAGCCGGCCAc > 2:399904/1‑149 (MQ=255) aTCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGCCAGCCAGCCGGCCAc < 1:399904/149‑1 (MQ=255) aTCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGCCAGCCAGCCGGCCAc < 6:219049/149‑1 (MQ=255) gTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCcg > 7:378386/1‑149 (MQ=255) ccTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCGCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGttt < 8:293428/149‑1 (MQ=255) tCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTc < 8:345159/149‑1 (MQ=255) cGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTc < 8:238469/148‑1 (MQ=255) cGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTc < 5:170234/148‑1 (MQ=255) tgGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAac < 4:123274/148‑1 (MQ=255) tCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTg > 7:162569/1‑149 (MQ=255) aGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTgg < 1:136704/148‑1 (MQ=255) aTCAGCGGGCCGAAGCGCGGGTCGTCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAAt < 2:26590/149‑1 (MQ=255) aTCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAAt < 6:10288/149‑1 (MQ=255) aTCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAAt < 1:291722/149‑1 (MQ=255) aTCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAAt > 4:289262/1‑149 (MQ=255) aTCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAAt < 4:365825/149‑1 (MQ=255) aTCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGAGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCaag > 6:315950/1‑148 (MQ=255) gggCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTc < 2:43635/149‑1 (MQ=255) ccGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGtt < 8:378386/149‑1 (MQ=255) cGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTg > 6:291759/1‑149 (MQ=255) gAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTgg < 6:123430/149‑1 (MQ=255) gAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTgg > 6:51789/1‑149 (MQ=255) aaGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGc < 4:413/149‑1 (MQ=255) aGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCACACCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGc < 1:78431/149‑1 (MQ=255) gggTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCcagcag < 5:51789/149‑1 (MQ=255) gCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGc > 1:152588/1‑149 (MQ=255) gCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGcc < 6:277767/139‑1 (MQ=255) gCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGcc > 5:277767/1‑139 (MQ=255) gCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCtt > 3:329214/1‑147 (MQ=255) gCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGACTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCtt > 6:155726/1‑147 (MQ=255) ggCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAgg < 3:122363/149‑1 (MQ=255) ggCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAgg > 6:362193/1‑149 (MQ=255) ggCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGACTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAgg < 5:155726/149‑1 (MQ=255) acaTCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGGTGTCGACCCGGcc > 8:165585/1‑149 (MQ=255) caTCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGccc > 1:42795/1‑149 (MQ=255) aTCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGccc > 3:169320/1‑148 (MQ=255) aTCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGccc < 4:169320/148‑1 (MQ=255) aTCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGccc > 1:214969/1‑148 (MQ=255) aTCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCg > 5:224136/1‑149 (MQ=255) tCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGa > 1:271873/1‑149 (MQ=255) acaTAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCgg < 2:152588/149‑1 (MQ=255) caTAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCggg < 7:326270/149‑1 (MQ=255) aTAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGgt > 1:96841/1‑149 (MQ=255) aTAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGgt > 8:78644/1‑149 (MQ=255) gcTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGgttgaca < 5:291759/149‑4 (MQ=255) cACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCggg < 2:392062/139‑1 (MQ=255) cACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCggg > 1:392062/1‑139 (MQ=255) cACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGt > 5:314602/1‑149 (MQ=255) cGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCa > 2:292844/1‑102 (MQ=255) cGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCa < 1:292844/102‑1 (MQ=255) cGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTcg < 2:214969/149‑1 (MQ=255) gCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGTCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTcgc > 7:85516/1‑149 (MQ=255) gCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTcgc > 7:188153/1‑149 (MQ=255) gTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGcggtcgg > 3:326535/1‑149 (MQ=255) tCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGcggtcggt < 6:224136/149‑1 (MQ=255) tCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGGTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGcggtcggt < 5:322690/149‑1 (MQ=255) aCGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGc < 8:191515/90‑1 (MQ=255) aCGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGc > 7:191515/1‑90 (MQ=255) aCGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGgtt < 2:408757/129‑1 (MQ=255) aCGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTgg > 6:125361/1‑149 (MQ=255) cGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGTCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTggg < 8:85516/149‑1 (MQ=255) gCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTgggg > 5:116536/1‑149 (MQ=255) gCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTgg < 7:60599/147‑1 (MQ=255) gCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTgg > 8:60599/1‑147 (MQ=255) gTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCg > 5:119660/1‑148 (MQ=255) acgcggggTGGCCGCCAGCCAGCCGGCCAC‑GCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCgg > 3:158929/8‑149 (MQ=255) tCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGa < 8:66466/149‑1 (MQ=255) aGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAg < 3:289262/148‑1 (MQ=255) tGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTgggg < 2:407474/137‑1 (MQ=255) tGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTgggg > 1:407474/1‑137 (MQ=255) ccGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCgatg < 2:42795/149‑1 (MQ=255) ccGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCgatg < 1:361549/149‑1 (MQ=255) cGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTcg > 7:297886/1‑121 (MQ=255) cGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTcg < 8:297886/121‑1 (MQ=255) gctggcGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGc < 2:271873/148‑1 (MQ=255) ctggcGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGcac < 4:329214/149‑1 (MQ=255) | GCTGGCAATCAGTGCGCCTTCGCTGTGGCCAATCAGGATCAGCGGGCCGAAGCGCGGGTCGGCTTTGAGCTTGCGGCTCCAGGCGACCACATCGGCCACATAGCGCTCCACGCTGAGGTCACGCTCGTCAGGCGTGGCCGGCTGGCTGGCGGCCAC‑CCCGCGTTTGTCGTAACGCACGCTGGCAATGTGTTCGTTGGCCAGCAGCAGGGCCAGACGCTTCAGGTTGTCGACCCGGCCCGACGCCGGGTTGTTACCGTCGCGGTCGGTGGGGCCGGAGCCGGCGATGATCAGCAC > NC_002947/2054176‑2054469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |