| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,077,428 | T→C | 6.2% | F51S (TTC→TCC) | PP_1853 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,077,428 | 0 | T | C | 6.2% | 188.4 / 2.5 | 64 | F51S (TTC→TCC) | PP_1853 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (33/27); new base C (2/2); total (35/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GCCATGGAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTGGGTCGTTACGGGTGAGCATG > NC_002947/2077280‑2077576 | gCCATGGAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGgttgtt < 6:241798/149‑1 (MQ=255) tGGAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAg > 3:321875/1‑149 (MQ=255) ggAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTCCCAGc > 5:58936/1‑149 (MQ=255) ggAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTCCCAGc > 5:65015/1‑149 (MQ=255) gAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCg < 1:353586/149‑1 (MQ=255) aTCATTCAGCGCGGTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCgta < 8:131071/149‑1 (MQ=255) aGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCgta < 1:348782/142‑1 (MQ=255) aGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCgta > 2:348782/1‑142 (MQ=255) cgcgTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGAGTAGTACCCGct > 4:249749/1‑148 (MQ=255) gAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGAc > 8:20681/1‑149 (MQ=255) gAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTCCCAGCGTAGTACCCGCAAGCTGa < 6:65015/148‑1 (MQ=255) gAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTCCCAGCGTAGTACCCGCAAGCTGa < 6:58936/148‑1 (MQ=255) aTGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCt > 8:30606/1‑149 (MQ=255) tGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCtt > 1:305728/1‑149 (MQ=255) cTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGa > 5:226300/1‑149 (MQ=255) ttCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGAc > 7:49288/1‑149 (MQ=255) aGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCggg < 6:262293/149‑1 (MQ=255) aGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCggg < 6:268283/149‑1 (MQ=255) gTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCgggg < 6:226300/149‑1 (MQ=255) gCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCgggg > 3:65536/1‑147 (MQ=255) ccGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAg > 1:200907/1‑149 (MQ=255) gAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCgggg > 7:14099/1‑144 (MQ=255) gAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCgggg < 8:14099/144‑1 (MQ=255) gTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGtt < 2:200907/148‑1 (MQ=255) ggCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTtct > 6:359999/1‑149 (MQ=255) gCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAgg < 3:149331/148‑1 (MQ=255) gAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAg > 3:102980/1‑149 (MQ=255) gccAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAg > 7:44648/1‑149 (MQ=255) gccAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAg > 7:254192/1‑149 (MQ=255) ggCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACa > 8:309681/1‑144 (MQ=255) ggCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACa < 7:309681/144‑1 (MQ=255) ccTGAGGCTTACCCCGGCTGCCGTGGGCAAGCTCGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCGTGACCGAAGCGGGGGAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCa < 7:268194/149‑1 (MQ=255) ccTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCa < 2:305728/149‑1 (MQ=255) cTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAgg > 8:315660/1‑130 (MQ=255) cTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAgg < 7:315660/130‑1 (MQ=255) gAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCa > 5:415274/1‑149 (MQ=255) cTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCa < 8:49288/149‑1 (MQ=255) cTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCa < 1:272364/149‑1 (MQ=255) ttACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAg > 5:246541/1‑149 (MQ=255) tACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAg > 4:368580/1‑148 (MQ=255) ccGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGc > 8:333495/1‑149 (MQ=255) cGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGcc > 6:245445/1‑149 (MQ=255) aaGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAg < 4:171667/107‑1 (MQ=255) aaGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAg > 3:171667/1‑107 (MQ=255) aaGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGc < 3:368580/149‑1 (MQ=255) aCGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCTCACCATTCAGTACGCCGTGGCCAACCTGGCCAGt > 8:188777/1‑149 (MQ=255) aCGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTAc < 5:325607/128‑1 (MQ=255) aCGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTAc > 6:325607/1‑128 (MQ=255) aCGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTgg < 1:158468/135‑1 (MQ=255) cGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAGGTTGGCCacgg < 6:415274/149‑4 (MQ=255) gTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTg > 1:286022/1‑148 (MQ=255) gTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTg > 2:277021/1‑148 (MQ=255) gcgcAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAg < 5:245445/148‑1 (MQ=255) cTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGc > 4:5079/1‑147 (MQ=255) cTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTACAGAAGGc > 1:140300/1‑147 (MQ=255) tGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAg > 2:70452/1‑149 (MQ=255) ggAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGc < 7:333495/149‑1 (MQ=255) gAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGcc > 3:89091/1‑149 (MQ=255) gcgcGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGc > 3:302879/1‑149 (MQ=255) cgACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTgg < 5:359999/149‑1 (MQ=255) cgACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTgg < 8:254192/149‑1 (MQ=255) cgACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTgg < 8:44648/149‑1 (MQ=255) cTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTGGGTc < 4:321875/149‑1 (MQ=255) ggTGTGCAGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTg < 4:139476/124‑1 (MQ=255) ggTGTGCAGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTg > 3:139476/1‑124 (MQ=255) gttgttCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGTGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTGGGTCGTTACGGGTGa < 5:263517/149‑1 (MQ=255) gttgttCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTGGGTCGTTACGGGt > 7:203633/1‑147 (MQ=255) gttgttCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTCGCCAGTGCACAAGGCCAGCCGGCTGGGTCGTTACGGGt > 2:117149/1‑147 (MQ=255) ttCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGc > 8:72694/1‑107 (MQ=255) tCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTGGGTCGTTACGGGTGAGCATg > 5:406886/1‑149 (MQ=255) | GCCATGGAATCATTCAGCGCGTTGGAATGCTTCATCCGCAGTGCCGAGGTCGGCAGTTTTGCCGAAGCCGCCAGGCGCCTGAGCCTTACCCCGGCTGCCGTGGGCAAGCACGTTGCGCAGCTGGAAGCGCGACTGGGTGTGCGGTTGTTCCAGCGTAGTACCCGCAAGCTGACCTTGACCGAAGCGGGGCAGCGTTTTCTCGGCGAGGTCAGTGACAGCTTTCGCACCATTCAGTACGCCGTGGCCAACCTGGCCAGTGCAGAAGGCCAGCCGGCTGGGTCGTTACGGGTGAGCATG > NC_002947/2077280‑2077576 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |