| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,184,222 | T→G | 5.3% | W94G (TGG→GGG) | PP_5490 → | site‑specific DNA recombinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,184,222 | 0 | T | G | 5.3% | 245.1 / 3.9 | 76 | W94G (TGG→GGG) | PP_5490 | site‑specific DNA recombinase |
| Reads supporting (aligned to +/- strand): ref base T (40/32); new base G (2/2); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.88e-01 | |||||||||||
GTTGATGAGGCTGCTTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGTCCAAAG > NC_002947/2184074‑2184365 | gTTGATGAGGCTGCTTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCt < 8:318699/149‑1 (MQ=255) gatgaGGCTGCTTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGc > 7:320952/1‑149 (MQ=255) atgaGGCTGCTTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCAGGGCt > 6:365214/1‑149 (MQ=255) ctgctTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCAGGGCTCagaca < 5:365214/149‑5 (MQ=255) gctTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAAcacca > 6:369252/1‑149 (MQ=255) ctTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAAcacca < 6:378744/148‑1 (MQ=255) gATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTAc > 5:387445/1‑149 (MQ=255) tcatcTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCAGGGCTCaga < 3:332450/139‑3 (MQ=255) tcatcTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCAGGGCTCaga > 4:332450/1‑137 (MQ=255) ctcAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGgctgc > 6:328922/1‑149 (MQ=255) tcAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGgctgct > 1:222584/1‑149 (MQ=255) tcAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGgctgct > 3:97839/1‑149 (MQ=255) aggccaggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAac > 4:263373/1‑132 (MQ=255) aggccaggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAac < 3:263373/132‑1 (MQ=255) aggccaggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGgctgct < 2:222584/147‑1 (MQ=255) aggccaggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTgg > 3:302209/1‑149 (MQ=255) ccaggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTc < 1:336154/148‑1 (MQ=255) aggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATTGGATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCACTGGCTCAACACCACTACGGCTGCTGGt > 1:105121/1‑146 (MQ=255) ggcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAgat < 6:387445/149‑1 (MQ=255) gcGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAgat > 5:68315/1‑148 (MQ=255) tgtggttgtggtGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATaa > 5:389368/1‑149 (MQ=255) tggttgtggtGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATg < 6:389368/149‑1 (MQ=255) gttgtggtGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGa < 5:328922/148‑1 (MQ=255) gtgAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGGTGAATCGCTTGGGCGCTGGGTTTCAGTCTCTGTCTGAGCCCTGGCTCaa < 3:124569/110‑1 (MQ=255) aGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTg > 5:152901/1‑148 (MQ=255) tcTTGATCGGCTCGCACGGTCGACAATT‑GATTTTCTGTCTATTGCAGAGCAGCTGTATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTtgcatgca < 8:320952/149‑1 (MQ=255) tcTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAacac > 4:208525/1‑105 (MQ=255) tcTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAacac < 3:208525/105‑1 (MQ=255) tcTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCa > 8:335608/1‑149 (MQ=255) cTTGATCGTCGCTCACGGTCGACAATT‑CATTTGCTGTCTAATGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCAt < 4:43124/149‑1 (MQ=255) gATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGc > 6:362043/1‑149 (MQ=255) ggTCGACAATT‑GATTTGCTGTCTATTGGAGAGCAGCTGAATCGCATGCGCGCGGGGTACCAGTCTCTGTCTGAGCACTGGCTCAACACAACTACCGGAGCAGGTCAGAGGATAAAGAGGAAATTTGAAGGCATCGATAGCTGCGAggg > 6:102675/1‑146 (MQ=255) aaTT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGa < 6:152901/149‑1 (MQ=255) aaTT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGa > 1:156023/1‑149 (MQ=255) aaTT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGa > 1:294679/1‑149 (MQ=255) aTT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGAt < 1:122330/149‑1 (MQ=255) aTT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGAt > 2:122330/1‑149 (MQ=255) tt‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATc < 4:302209/149‑1 (MQ=255) aTTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCg > 3:170668/1‑147 (MQ=255) tGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCg > 7:77766/1‑148 (MQ=255) tATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATc < 7:132016/136‑1 (MQ=255) tATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATc > 8:132016/1‑136 (MQ=255) agagCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCgg > 7:187376/1‑149 (MQ=255) gagCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCggg < 2:294679/149‑1 (MQ=255) gcagcTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTc > 2:73411/1‑149 (MQ=255) gcTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGTGCGGGTCgag > 7:95857/1‑149 (MQ=255) gcTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCgag < 4:373435/149‑1 (MQ=255) cTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTa > 4:349610/1‑126 (MQ=255) cTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTa < 3:349610/126‑1 (MQ=255) tCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAg > 7:32254/1‑149 (MQ=255) gCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAgcg > 6:231459/1‑149 (MQ=255) gCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAgc < 6:68315/148‑1 (MQ=255) ttGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAgcg > 2:306672/1‑147 (MQ=255) cTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAg < 8:77766/149‑1 (MQ=255) cTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAg < 2:55078/149‑1 (MQ=255) cTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAg < 2:156023/149‑1 (MQ=255) tGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTCATCGTAGACCGGACGAGAGCGCGACGAGAGGCAGCGCAGAGGAAgg > 4:245300/1‑149 (MQ=255) ggTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGc > 8:253505/1‑121 (MQ=255) ggTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAggg > 2:187324/1‑148 (MQ=255) ggTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAgg < 2:105121/147‑1 (MQ=255) ggTTGCAGTCTCTGTCTGAGCCCTGGCTCAACAACACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGATCGCAGACCTGATCGTAGACCGGACGAGAGc < 7:253505/122‑1 (MQ=255) cAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTa > 2:308630/1‑102 (MQ=255) cAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTa < 1:308630/102‑1 (MQ=255) aGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATaaaa < 8:187376/149‑1 (MQ=255) tctcTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGTGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAAtt < 5:362043/149‑1 (MQ=255) tctcTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAAtt < 1:306672/149‑1 (MQ=255) tctgtctgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAgg > 1:191429/1‑137 (MQ=255) tctgtctgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAgg < 2:191429/137‑1 (MQ=255) tctgtctgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCg > 3:258622/1‑149 (MQ=255) ctgtctgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATAATTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGACGGGCATAAAATACgg > 4:306878/1‑149 (MQ=255) tgtctgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTc < 8:32254/146‑1 (MQ=255) tctgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGTc < 1:73411/148‑1 (MQ=255) tgAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGGGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGTCCa > 1:176951/1‑148 (MQ=255) gAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGt < 1:91348/144‑1 (MQ=255) gAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGt > 2:91348/1‑144 (MQ=255) gAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGTCCa > 7:183269/1‑147 (MQ=255) aGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCGTCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGTCCAAAg > 2:234318/1‑149 (MQ=255) | GTTGATGAGGCTGCTTGATCATCTCAGGCCAGGCGATGTGGTTGTGGTGAGTCGTCTTGATCGGCTCGCACGGTCGACAATT‑GATTTGCTGTCTATTGCAGAGCAGCTGAATCGCTTGGGCGCTGGGTTGCAGTCTCTGTCTGAGCCCTGGCTCAACACCACTACGGCTGCTGGTCAGATGATAATGACGATATTTGCAGGCATCGCTAGCTTCGAGCGCAG‑CCTGATCGTAGACCGGACGAGAGCGGGTCGAGAGGCAGCGCAGAGGAAGGGCATAAAATTCGGTCCAAAG > NC_002947/2184074‑2184365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |