Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,255,976 | G→A | 9.8% | intergenic (+36/‑668) | asd → / → PP_1990 | aspartate‑semialdehyde dehydrogenase/transposase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,255,976 | 0 | G | A | 9.8% | 226.8 / 9.4 | 81 | intergenic (+36/‑668) | asd/PP_1990 | aspartate‑semialdehyde dehydrogenase/transposase |
Reads supporting (aligned to +/- strand): ref base G (41/32); new base A (4/4); total (45/36) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CAAGCTGAACATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGTTGCTTTTGCTTTTGC > NC_002947/2255829‑2256113 | catgCTGAAGATGGGGTCGCAGTAGCTGGGCGCGTTCACGGTGGGTGACGAGCTGCTGTGGGTCGCCGCCGATCCGCTGCGCCGCATGTTGCGGTTTCTGCTGGAGCTTTGATCGTTGAGGCTTCACCTGAAAAATACCGCACTGGTGa < 3:394465/146‑1 (MQ=255) aGCTGAACATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGa > 1:34286/1‑147 (MQ=255) gCTGAACATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑g > 3:129497/1‑149 (MQ=255) tGAACATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTg > 2:166268/1‑149 (MQ=255) aaCATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCg < 2:155601/149‑1 (MQ=255) aaCATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCg > 5:118151/1‑149 (MQ=255) aCATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCgg > 1:77505/1‑149 (MQ=255) aTGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTa < 1:166268/149‑1 (MQ=255) ggggTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTAtt > 1:180339/1‑149 (MQ=255) ggggTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTAtt > 4:168271/1‑149 (MQ=255) gTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTAttttt > 2:57253/1‑149 (MQ=255) tCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTAttttt‑‑‑‑t < 5:380127/149‑1 (MQ=255) gTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGc < 2:180339/149‑1 (MQ=255) aCCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATgat > 8:163332/1‑146 (MQ=255) ccTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCt > 2:342452/1‑148 (MQ=255) ccTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCCTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCt < 7:340665/148‑1 (MQ=255) cTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTAttttt‑‑‑‑tt > 7:210192/1‑141 (MQ=255) cTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTAttttt‑‑‑‑tt < 8:210192/141‑1 (MQ=255) gggCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGaaa < 3:168271/149‑1 (MQ=255) gcgcGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAg > 3:101984/1‑148 (MQ=255) gTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGAACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATg > 5:362523/1‑148 (MQ=255) aCCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCAttt > 7:7967/1‑149 (MQ=255) cGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑gg < 6:118151/149‑1 (MQ=255) cAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑cc > 4:19281/1‑149 (MQ=255) cAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑cc > 2:309134/1‑149 (MQ=255) aGCTTCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCt < 2:268160/149‑1 (MQ=255) tgctgTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAAt > 4:96979/1‑149 (MQ=255) ctgTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCg > 2:49496/1‑149 (MQ=255) ctgTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCg < 8:7967/149‑1 (MQ=255) tgGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGTCACCA‑GTGCGGTAtttttca > 3:218561/1‑106 (MQ=38) tgGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGTCACCA‑GTGCGGTAtttttca < 4:218561/108‑3 (MQ=38) tgGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCg < 1:57253/149‑1 (MQ=255) ggCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAAt < 5:417201/141‑1 (MQ=255) ggCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAAt > 6:417201/1‑141 (MQ=255) gcgcCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGGTACATAATCGCCgta > 1:343356/1‑147 (MQ=255) cgccgcCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATaa > 8:63743/1‑149 (MQ=255) gccgccGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATTCCTGAAAGTATGCATTT‑GGTTCTCGTG‑‑CCTAATCTCCGGATAAt > 8:130187/1‑149 (MQ=255) ccgccgAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACACCTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAAt < 1:115707/149‑1 (MQ=255) ccgAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCAt > 2:145785/1‑149 (MQ=255) ccgAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCAt > 3:128122/1‑149 (MQ=255) cgAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATg > 2:286955/1‑149 (MQ=255) gAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGc > 6:85676/1‑149 (MQ=255) cGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCt > 7:203367/1‑149 (MQ=255) cTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGt > 8:165474/1‑149 (MQ=255) gcgcCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGttt < 3:218650/149‑1 (MQ=255) ccgcATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAAt > 8:306477/1‑149 (MQ=255) ccgcATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAAt > 7:358817/1‑149 (MQ=255) ccgcATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGAGGG‑‑CCTAATCTCCGGATAATTAATTCCGCTGTTTAAt > 8:312146/1‑149 (MQ=255) gTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGa > 7:1212/1‑148 (MQ=255) ttGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGaaa > 5:372790/1‑149 (MQ=255) gCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAAt < 6:372790/148‑1 (MQ=255) gCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAAt < 4:129497/148‑1 (MQ=255) cGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGCG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGt < 1:286955/149‑1 (MQ=255) ggATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTTAGGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGt < 1:309134/149‑1 (MQ=255) ggATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTc < 2:34286/149‑1 (MQ=255) ggctgGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAAtt > 8:155570/2‑116 (MQ=255) ggctgGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAAtt < 7:155570/115‑1 (MQ=255) ctgGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGctct < 1:342452/147‑1 (MQ=255) gAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGAc < 2:77505/147‑1 (MQ=255) gTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAgccgttgcc < 3:19281/148‑1 (MQ=255) ttCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAgccgttgccgt > 6:360891/1‑149 (MQ=255) cTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAgccgttgccgttgccgt < 8:358817/149‑1 (MQ=255) ttCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCAGGATAATTAATGCCGCTGTTTAATGGCGAAATGTCTGCTCTCACAGAgccgttgccgttgccgtt > 4:216651/1‑149 (MQ=255) ccTGAAAAATACCGCACGGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCGGCTGTTTAATGGCGAAATGTCTGCTCTGACAGCGCCGTTGCCGTTGCCGttgctt > 5:221257/1‑149 (MQ=255) tGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgctttt > 6:150506/1‑149 (MQ=255) gAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgctttt < 1:145785/148‑1 (MQ=255) aaaaaTACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgc < 5:360891/149‑1 (MQ=255) aaaaaTACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgc > 5:34588/1‑149 (MQ=255) aaaaaTACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgc > 4:349359/1‑149 (MQ=255) aaTACCGCACTGTCACCA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATg > 7:175848/1‑98 (MQ=38) aaTACCGCACTGTCACCA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATg < 8:175848/98‑1 (MQ=38) aTACCGCACTGTCACCA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCt > 7:177963/1‑108 (MQ=39) aTACCGCACTGTCACCA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCt < 8:177963/108‑1 (MQ=39) aTACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgctttt < 8:1212/149‑1 (MQ=255) aTACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgctttt < 8:203367/149‑1 (MQ=255) aTACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgctttt < 1:49496/149‑1 (MQ=255) tACCGCACTGTCACCA‑GTGCGGTATTTTTCAGGTGAAGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgctttt > 7:96728/1‑146 (MQ=25) tACCGCACTGTCACCA‑GTGCGGTATTTTTCAGGTGAAGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgctttt < 8:96728/146‑1 (MQ=25) aCCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAAt > 2:189393/1‑94 (MQ=255) aCCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAAt < 1:189393/94‑1 (MQ=255) ccGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGttgcttttgcttttgc < 7:63743/148‑1 (MQ=255) | CAAGCTGAACATGGGGTCGCAGTACCTGGGCGCGTTCACCGTGGGTGACCAGCTGCTGTGGGGCGCCGCCGAACCGCTGCGCCGCATGTTGCGGATTCTGCTGGAGCGTTGATCGTTCAGGCTTCACCTGAAAAATACCGCACTGGTGACA‑GTGCGGTATTTTT‑‑‑‑TTATGCCTGAAAGTATGCATTT‑GGGTCGCGGG‑‑CCTAATCGCCGGATAATTCATGCCGCTGTTTAATGGCGAAATGTCTGCTCTGACAGAGCCGTTGCCGTTGCCGTTGCTTTTGCTTTTGC > NC_002947/2255829‑2256113 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |