Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,344,693 T→G 7.8% intergenic (‑44/+31) PP_2061 ← / ← PP_2062 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,344,6930TG 7.8% 215.9 / 5.0 72intergenic (‑44/+31)PP_2061/PP_2062hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (33/33);  new base G (2/4);  total (35/37)
Fisher's exact test for biased strand distribution p-value = 6.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGGCTTG  >  NC_002947/2344546‑2344840
                                                                                                                                                    |                                                                                                                                                   
tcgACAATAAATACCCCGTTCTCATAGGCGATATAAGCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc                                                                                                                                                    >  8:357930/1‑149 (MQ=255)
  gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGc                                                                                                                                                  <  7:48568/149‑1 (MQ=255)
  gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGc                                                                                                                                                  <  3:30623/149‑1 (MQ=255)
  gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGgcgc                                                                                                                                                  <  4:248396/149‑1 (MQ=255)
  gACAATAAATACCCCGTTCTCATAGGCGATATAAACCGCAGCTCTAACGTTATTGCTGGAATTGAAATTCCACATTTCAGCTCCGCTTGCGTGAGTATTCAAGAGGGAGTCAGTAGAGGCGCCAAAGACGACCAGGGTCGT‑TTCTTCGc                                                                                                                                                  >  6:329598/1‑149 (MQ=255)
        aaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCtctac                                                                                                                                            <  7:50866/149‑5 (MQ=38)
          ataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCAttt                                                                                                                                          <  6:243639/149‑1 (MQ=255)
          ataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTCGCATTGAAATTCAACATTTAATCGCCGCAGGCCAGAGTATTCAAGAGGGAGTCAGTAGAGGCGCCGAAGAAGACAAGGCACGT‑TTCGTCGCCTTCaat                                                                                                                                           >  4:177550/1‑146 (MQ=255)
           taCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGTGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa                                                                                                                                         <  1:106377/149‑1 (MQ=255)
           taCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa                                                                                                                                         >  4:352467/1‑149 (MQ=255)
            aCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt                                                                                                                                        <  1:407119/149‑1 (MQ=255)
             ccccTTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt                                                                                                                                        <  4:7527/148‑1 (MQ=255)
             ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc                                                                                                                                                    >  6:179784/1‑136 (MQ=255)
             ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgtc                                                                                                                                                    <  5:179784/136‑1 (MQ=255)
             ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt                                                                                                                                        <  7:304710/148‑1 (MQ=255)
              cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGa                                                                                                                                      <  2:103649/149‑1 (MQ=255)
              cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCtctactga                                                                                                                                         >  1:90619/1‑139 (MQ=37)
              cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCtctactga                                                                                                                                         <  2:90619/146‑8 (MQ=37)
                  ttCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtgt                                                                                                                                  <  6:356135/149‑1 (MQ=255)
                       aTAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAtt                                                                                                                             >  6:84854/1‑149 (MQ=255)
                       aTAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCAGTTATGAGTGAGTAtt                                                                                                                             >  7:178936/1‑149 (MQ=255)
                             gATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTaaa                                                                                                                       >  8:154452/1‑149 (MQ=255)
                                 taACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCa                                                                                                                    <  2:322075/148‑1 (MQ=255)
                                 taACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAg                                                                                                                   <  4:286531/149‑1 (MQ=255)
                                     ccGCAGCGCTAACGTTAATGCTGGCATTGAAATTCCACATTTAAGCGCAGCAGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCAGAAGACGACCAGGGACGT‑ATCGTCGCCTTCATTTATGAGTGAGTATTTGTAAATCAGTGAt                                                                                                               >  8:290936/1‑149 (MQ=255)
                                             cTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCTCTGGCGTGAGTATTCAAGAGGGCGTAAGTAGAGGCGCCGAAGACGTCCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATTGGCTGAt                                                                                                       <  7:290936/149‑1 (MQ=255)
                                             cTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAt                                                                                                       >  1:92457/1‑149 (MQ=255)
                                              tAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATggagaatcg                                                                                                      >  5:66407/1‑142 (MQ=255)
                                                      cagatctcATTGAAATTCCACATTTCAGCGGCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgc                                                                                               <  7:94806/141‑1 (MQ=255)
                                                        gCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcgc                                                                                             >  4:95352/1‑148 (MQ=255)
                                                         cTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTa                                                                                           >  4:392089/1‑149 (MQ=255)
                                                          tGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcg                                                                                              >  1:80778/1‑145 (MQ=255)
                                                          tGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTgcg                                                                                              <  2:80778/145‑1 (MQ=255)
                                                            gCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAtt                                                                                         <  5:84854/148‑1 (MQ=255)
                                                              aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAtgtttttat                                                                                               >  8:94806/1‑138 (MQ=255)
                                                              aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATAGGCTGATTTTTTTGCGCTAttgtt                                                                                      >  3:302463/1‑149 (MQ=255)
                                                                 gAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc                                                                                   >  4:215395/1‑149 (MQ=255)
                                                                    aTTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGtt                                                                                <  7:20387/149‑1 (MQ=255)
                                                                      tCCACATTTCAGCGCCGCTGGCCAGAGTATTCAAGAGGGCGTCAGTACAGGCGACGAAGAACACCAGGGTCGT‑TTCGTAGCCATAATTTATGATTGTGTATTTGTAAATCAGTGATTGGCAGAATTTATTGCCCTATTATTGACGTTg                                                                               >  2:204736/1‑148 (MQ=255)
                                                                               cAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTg                                                                      <  3:95352/148‑1 (MQ=255)
                                                                                aGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc                                                                                   >  5:232640/1‑134 (MQ=255)
                                                                                aGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTc                                                                                   <  6:232640/134‑1 (MQ=255)
                                                                                      gcTGGCGTGAGTATTCAAGAGGCCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTAc                                                              <  4:274336/149‑1 (MQ=255)
                                                                                          gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATg                                                          >  1:162452/1‑149 (MQ=255)
                                                                                            gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTCCATTTATGAGTGTGTATTTGTAAATAAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc                                                        >  5:327563/1‑149 (MQ=255)
                                                                                            gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCAGAAGACGACCAGGGTCGT‑TTCGTCGCCTCCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGAGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc                                                        >  5:321953/1‑149 (MQ=255)
                                                                                               aGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAATTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCtt                                                     >  7:128734/1‑149 (MQ=255)
                                                                                                  aTTCAAGAGTGCGTGAGTATAGGCGTCAAATTCGAGCAGGGTCGT‑TTGGTCGCCTTCATTTATGAGTGTGTATTTTTAAATCAGTGATTGGGTGATTTTTTTTGGGTATTGTT‑TCGTTGATAATATTGATGTCTACGATGCCCTTGCt                                                  <  5:329598/148‑1 (MQ=255)
                                                                                                  aTTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc                                                   <  7:154452/148‑1 (MQ=255)
                                                                                                   ttCAAGAGTGCGTCAGTTGAGGCGGCGAAGAGGACCTGGGTCGT‑TTCGTCGTCTTCATTTATGAGTGTGTATTTGTTAATCAGTTATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCt                                                  <  3:177550/148‑1 (MQ=255)
                                                                                                      aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata                                              <  2:92457/149‑1 (MQ=255)
                                                                                                      aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata                                              <  1:189350/149‑1 (MQ=255)
                                                                                                      aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat                                               >  5:377844/1‑148 (MQ=255)
                                                                                                      aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGGGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtata                                              <  2:137650/149‑1 (MQ=255)
                                                                                                           ggCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAATTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGc                                          <  8:128734/148‑1 (MQ=255)
                                                                                                              gTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtttt                                      >  4:58065/1‑149 (MQ=255)
                                                                                                               tCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg                                     >  6:297807/1‑149 (MQ=255)
                                                                                                                  gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc                                                   <  5:14201/132‑1 (MQ=255)
                                                                                                                  gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc                                                   >  6:14201/1‑132 (MQ=255)
                                                                                                                  gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc                                                   >  1:257932/1‑132 (MQ=255)
                                                                                                                  gTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc                                                   <  2:257932/132‑1 (MQ=255)
                                                                                                                     gagGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATcc                               <  7:136548/149‑1 (MQ=255)
                                                                                                                       ggCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt                             <  1:204736/149‑1 (MQ=255)
                                                                                                                       ggCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt                             <  1:136290/149‑1 (MQ=255)
                                                                                                                       ggCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt                             >  4:217431/1‑149 (MQ=255)
                                                                                                                        gcgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg                                     >  7:14110/1‑140 (MQ=255)
                                                                                                                        gcgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg                                     <  8:14110/140‑1 (MQ=255)
                                                                                                                            cGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGGTTATAAAGCTTTTGGCTTCCTTGAGtt                        >  7:96343/1‑149 (MQ=255)
                                                                                                                             gAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGGTTTTGGCATCCTTGAGTTc                       >  6:88520/1‑149 (MQ=255)
                                                                                                                                gacgacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGt                    <  3:215395/149‑1 (MQ=255)
                                                                                                                                   gacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt                  >  1:106468/1‑148 (MQ=255)
                                                                                                                                   gacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt                  >  5:178977/1‑148 (MQ=255)
                                                                                                                                             gT‑TTCTTCGCCTTCATTTTTTAGTGTTTATTTGTAAATCAGTGATTGGCTTATTTTTTTGCGGTATTGTTGTCTTTGATAATCTTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGttt        <  7:189986/148‑1 (MQ=255)
                                                                                                                                             gT‑TTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTg       <  3:352467/149‑1 (MQ=255)
                                                                                                                                              t‑ttCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTgg      >  4:242582/1‑149 (MQ=255)
                                                                                                                                              t‑ttCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTg       >  1:123071/1‑148 (MQ=255)
                                                                                                                                                   gtcgCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGGCTTg  >  7:7529/1‑149 (MQ=255)
                                                                                                                                                   gtcgCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGGCTTg  >  5:333563/1‑149 (MQ=255)
                                                                                                                                                   gtcgCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATAGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGGCTTg  <  4:302463/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAGGTGTTTGGCTTG  >  NC_002947/2344546‑2344840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑