| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 26,844 | A→T | 8.1% | intergenic (+40/+145) | PP_0021 → / ← PP_0022 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 26,844 | 0 | A | T | 8.1% | 211.0 / 7.8 | 74 | intergenic (+40/+145) | PP_0021/PP_0022 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (32/36); new base T (4/2); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.62e-01 | |||||||||||
GAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGTGTCCTA > NC_002947/26700‑26991 | gAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTgg > 5:13075/1‑149 (MQ=255) aaTCCCTTCTCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGCTAGTGTGAAGATGGCCCGGGAGGCACTGGGCGATCTGCGGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGt < 4:88156/149‑1 (MQ=255) cTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTa > 3:186386/1‑147 (MQ=255) aTCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGTAAACCACTGTGG‑TTACAGt < 4:284372/148‑1 (MQ=255) aTCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGt < 4:186386/148‑1 (MQ=255) tGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGaaaaaaa < 3:122569/149‑1 (MQ=255) ccGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGt < 3:346229/149‑1 (MQ=255) cGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTg < 1:87927/149‑1 (MQ=255) gATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGttt > 1:268042/1‑148 (MQ=255) cTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGt < 6:13075/148‑1 (MQ=255) ttATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACg > 3:27194/1‑146 (MQ=255) ttATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAg > 8:378048/1‑149 (MQ=255) aTCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTg > 5:26023/1‑134 (MQ=255) aTCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTg < 6:26023/134‑1 (MQ=255) tCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCt < 3:154929/148‑1 (MQ=255) gCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTAc > 7:368593/1‑148 (MQ=255) aTGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACAcg < 7:378048/149‑1 (MQ=255) tGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAg > 5:198737/1‑138 (MQ=255) tGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAg < 6:198737/138‑1 (MQ=255) tAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGccc > 5:227828/1‑149 (MQ=255) gTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGACCTGGc > 4:73854/1‑149 (MQ=255) tGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGc > 8:200373/1‑148 (MQ=255) aaGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCAc > 7:358711/1‑149 (MQ=255) cccGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAg < 7:34233/149‑1 (MQ=255) ccGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGt > 8:337864/1‑117 (MQ=255) ccGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGt < 7:337864/117‑1 (MQ=255) gaggaACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AAACACAGAGGTTTACACTGAAAAAAAGTCGTTTACAACGTAGCTAAGACACGCCCCCTGGCCACTCCCCAGGCCAg > 8:223269/1‑149 (MQ=38) tGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctc > 6:283419/1‑149 (MQ=255) gggCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctcc > 3:96893/1‑149 (MQ=255) ggCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctc < 3:137707/147‑1 (MQ=255) gCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctcctc < 7:180360/149‑1 (MQ=255) gCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctcct > 1:137965/1‑148 (MQ=255) ctgGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCAt < 8:368593/143‑1 (MQ=255) tgGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑ATTTTTTAACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCCCTCCCCCGGCGAGCGCGCTCCTCATTGATTCg > 2:392635/1‑149 (MQ=38) gAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGt > 7:181648/1‑148 (MQ=255) gAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGt < 8:358711/148‑1 (MQ=255) gCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCa < 5:121937/149‑1 (MQ=255) gCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCa < 3:389279/149‑1 (MQ=255) tGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctcctc < 5:46957/134‑1 (MQ=255) tGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGctcctc > 6:46957/1‑134 (MQ=255) aCTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTc < 6:227828/148‑1 (MQ=255) cTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCgg < 3:241047/149‑1 (MQ=255) cTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCgg < 2:137965/149‑1 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAg < 5:244667/115‑1 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAg > 6:244667/1‑115 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTc < 7:318579/138‑1 (MQ=255) tCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTc > 8:318579/1‑138 (MQ=255) aGGCCTGAGGAGGCCTGTTGTAAACCACTTTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGc > 1:55322/1‑149 (MQ=255) gCCTGAGGATGCCTGTTGTAAATCAC‑TTTTTTTCACTGT‑AACCAGAGTGGTTTACAGTGATAAAAAGTGGTTTACAACGTAGCTACGACAGGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTGAGTGGTGCGTc < 2:139502/149‑1 (MQ=255) gCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTc > 7:14761/1‑149 (MQ=255) gCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGAGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTc > 1:295007/1‑149 (MQ=255) ccTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCg < 7:200373/149‑1 (MQ=255) cTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTc > 7:40165/1‑136 (MQ=255) cTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTc < 8:40165/136‑1 (MQ=255) ggaggCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCTAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAacac < 1:392635/149‑1 (MQ=255) ggCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTa < 4:27194/149‑1 (MQ=255) ccTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtg < 2:55322/149‑1 (MQ=255) cTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCTTTCAGTCGGGCGTCTAAAACCTAtgc > 8:345059/1‑149 (MQ=255) tgttgtAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAt < 4:191381/146‑1 (MQ=255) tgttgtAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAt > 3:191381/1‑146 (MQ=255) ttgtAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAtgctgc < 2:268042/149‑1 (MQ=255) aCCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTccc > 4:216124/1‑87 (MQ=255) aCCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTccc < 3:216124/87‑1 (MQ=255) ccAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGc > 2:372663/1‑149 (MQ=255) cAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAt < 7:139471/136‑1 (MQ=255) cAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTAt > 8:139471/1‑136 (MQ=255) aC‑TTTTTTTCACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCt > 1:68574/1‑149 (MQ=255) c‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCtt < 1:372663/149‑1 (MQ=255) tCACTGTAAACCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCAcgc > 3:169022/1‑149 (MQ=255) ctgtaaaCCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCtt > 8:199359/6‑139 (MQ=255) ctgtaaaCCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCtt < 7:199359/134‑1 (MQ=255) tGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCcgcg > 5:240910/1‑149 (MQ=255) gtaaaCCACTGTGG‑TTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCgg > 7:94061/4‑149 (MQ=255) aCCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGgtgt < 8:14761/149‑1 (MQ=255) tcacaGGGGGTTACAGTGAAAAAATGTGGTTTACAACGTCGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGTGTc < 4:398541/148‑1 (MQ=255) cacaGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGTGTcc > 7:365739/1‑149 (MQ=255) acaGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGTGTcc > 7:347218/1‑148 (MQ=255) acaGTGGTGTACAGTGAAAAAAAGTGGATTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCCGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTCCCACGCCGCGGTGTc > 3:398541/1‑147 (MQ=255) caGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGTGTCCta < 8:365739/149‑1 (MQ=255) | GAATCCCTTATCCGGATGCCGGTTGATCATCCTTATCGCAGAATGGATAGAGTGAAGATGGCCCGGGAGGAACTGGGCGATCTGCTGGAGCTGACTCAGGCCTGAGGAGGCCTGTTGTAAACCAC‑TTTTTTTCACTGT‑AACCACAGTGGTTTACAGTGAAAAAAAGTGGTTTACAACGTAGCTACGACACGCGCCCTGGCCACTCCCCAGGCCAGCGCGCTCCTCATTGATTCGTTCAGTCGGGCGTCGAACACCTATGCTGCTCGGGGCCTTGCCACGCCGCGGTGTCCTA > NC_002947/26700‑26991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |