| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,799,177 | C→T | 12.3% | intergenic (‑191/+25) | PP_2452 ← / ← ansB | hypothetical protein/glutaminase‑asparaginase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,799,177 | 0 | C | T | 12.3% | 208.7 / 16.1 | 81 | intergenic (‑191/+25) | PP_2452/ansB | hypothetical protein/glutaminase‑asparaginase |
| Reads supporting (aligned to +/- strand): ref base C (36/35); new base T (5/5); total (41/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.75e-01 | |||||||||||
TAAATTCGCAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTCGTTCTTGTC > NC_002947/2799036‑2799324 | taaATTCGCAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCgg > 1:168721/1‑149 (MQ=255) gCAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGa < 2:361140/148‑1 (MQ=255) gCAACAGCTCGTCATGAGAAATCCAGCGTTGGCCTGTAAACCATGCGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCACCGAGGCCCTCAGGGCCGGTGCGCCGGCTCTGAg < 1:55332/149‑1 (MQ=255) cAACAGCTTGTGAGGAGAAATCCAGCGTGGGCCTTTAAACCATGAGGACGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTTCGGGGTTGAGGAATTGGCAACGAGGCCCTGAGAGCCTGCGCACCGGCGCTGAgg < 6:15245/149‑1 (MQ=255) cAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGGGCCGGTGCGCCGGCTCTGAgg < 2:242597/149‑1 (MQ=255) cAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAgg > 4:198598/1‑149 (MQ=255) cAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAgg > 4:184753/1‑149 (MQ=255) aaCAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAggg < 2:168721/149‑1 (MQ=255) aGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGa < 5:369465/149‑1 (MQ=255) tCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCAc > 2:149440/1‑148 (MQ=255) tCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACt < 7:108930/149‑1 (MQ=255) tCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACt < 3:198598/149‑1 (MQ=255) tCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACt > 2:242016/1‑149 (MQ=255) aGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACt > 3:69287/1‑147 (MQ=255) aGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACt > 3:251285/1‑147 (MQ=255) aGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCa < 7:377730/149‑1 (MQ=255) gagaAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAg > 6:5764/1‑148 (MQ=255) agaAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTa < 5:5764/149‑1 (MQ=255) tCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTccc < 8:311979/149‑1 (MQ=255) cAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTcc > 2:147810/1‑146 (MQ=255) cAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTcc > 5:45834/1‑146 (MQ=255) cAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTcc > 1:59035/1‑146 (MQ=255) gCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCagaa < 6:233082/149‑1 (MQ=255) ttGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGTTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGAt < 4:69287/149‑1 (MQ=255) ggCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATc < 5:333863/148‑1 (MQ=255) cTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGGGCCGGTGCGCCGGCTCTGAgg < 3:210169/117‑1 (MQ=39) cTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGGGCCGGTGCGCCGGCTCTGAgg > 4:210169/1‑117 (MQ=39) cTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCt > 4:334203/1‑149 (MQ=255) aaCCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGc > 2:126033/1‑149 (MQ=255) aaCCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGc > 3:279084/1‑149 (MQ=255) ccATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGctc > 5:161755/1‑149 (MQ=255) cATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGctct < 3:325683/149‑1 (MQ=255) aTGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCtt > 2:118187/1‑149 (MQ=255) aGGCCGGTCATAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTg < 1:328328/148‑1 (MQ=255) ggTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGGGCCGGTGCGCCGGCTCTGa > 8:337697/1‑89 (MQ=38) ggTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGGGCCGGTGCGCCGGCTCTGa < 7:337697/89‑1 (MQ=38) gTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTCGCTGTCCTG‑GGTCTTgg > 7:354442/1‑149 (MQ=255) aCGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑t > 6:86852/1‑149 (MQ=255) cGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑Tc < 4:279084/149‑1 (MQ=255) ccGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCAt > 7:6304/1‑149 (MQ=255) ccGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCGGTCGTG‑GGTCTTGGTCA‑‑‑TCGCTACCAt > 8:152557/1‑149 (MQ=255) tttGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGc > 1:354963/1‑148 (MQ=255) aCCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTGCGGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGAt < 1:242016/149‑1 (MQ=255) ccTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATcc < 1:149440/149‑1 (MQ=255) gtCTACGCGGTTGAGGAATAGCCAACGACGCCCACAGAGCCGGCGCACCGGCCCAGAGGCGCAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑CCTCTTGCTCA‑‑‑TCGCTACCATCGCCAGCATCCGCGCtta > 4:90842/1‑148 (MQ=255) cTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCttttt > 3:176936/1‑149 (MQ=255) tACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTg > 3:125905/1‑149 (MQ=255) cgcgGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGATCTTCTCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTAGCATCGCCAGGATCCGCGCTTTTTGc < 8:354442/148‑1 (MQ=255) ggggTTGAGGAATTGGCAACGAGGCCGTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTGAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTGTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCgg < 3:90842/147‑1 (MQ=255) gcgGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCgg < 1:118187/149‑1 (MQ=255) gTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGt > 4:171228/1‑148 (MQ=255) tGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTg < 2:34618/106‑1 (MQ=255) tGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTg > 1:34618/1‑106 (MQ=255) gAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCg > 4:33654/1‑112 (MQ=255) gAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCg < 3:33654/112‑1 (MQ=255) aGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAgg > 4:347424/1‑149 (MQ=255) aGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACACCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAg < 3:123976/148‑1 (MQ=255) gAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCg > 4:98673/1‑109 (MQ=255) gAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCg < 3:98673/109‑1 (MQ=255) gAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGAGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTc > 1:287445/1‑149 (MQ=255) aTTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGt > 1:307609/1‑149 (MQ=255) ggCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGa < 2:354963/148‑1 (MQ=255) gCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAgg < 4:359205/117‑1 (MQ=255) gCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAgg > 3:359205/1‑117 (MQ=255) gCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTc > 6:248513/1‑143 (MQ=255) gCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTc < 5:248513/143‑1 (MQ=255) ggCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGAcc < 2:307609/149‑1 (MQ=255) ggCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGAcc < 3:347424/149‑1 (MQ=255) gCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGGCTCACGAcct < 8:100153/149‑2 (MQ=255) cccTCAGGGCCGGTGCGCCGGCTCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGAcc > 3:350471/1‑147 (MQ=255) cccTCAGGGCCGGTGCGCCGGCTCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGAc > 7:165619/1‑146 (MQ=255) cccTCAGGGCCGGTGCGCCGGCGCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGAc < 8:165619/146‑1 (MQ=255) ccTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCa < 2:314043/105‑1 (MQ=255) ccTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCa > 1:314043/1‑105 (MQ=255) tCAGGGCCGGTGCGCCGGCTCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑CGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTc > 1:127270/1‑149 (MQ=255) tCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTCCCATCGCCAGGATCCGCGCTTGTTGCGGGTTCCTGTCGTGAGCCCCGCCCCGGTc > 4:310220/1‑149 (MQ=255) tCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTc > 1:218856/1‑149 (MQ=255) agagCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGGCTCACGAcctgaacc < 3:184753/148‑7 (MQ=255) agagCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGGCTCACGAcctgaacc < 1:147810/148‑7 (MQ=255) agagCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTc < 6:45834/147‑1 (MQ=255) agCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTCGTTc < 4:251285/149‑1 (MQ=255) gcgcACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCATACTCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTCGTTCtt < 1:126033/149‑1 (MQ=255) gcgcACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTCGTTCTTGTc < 8:6304/149‑1 (MQ=255) | TAAATTCGCAACAGCTTGTCAGGAGAAATCCAGCGTTGGCCTGTAAACCATGAGGCCGGTCAGAAAGGTAAACGATGTCGCCGGTTTGTAACCTCTGTGTCTACGCGGTTGAGGAATTGGCAACGAGGCCCTCAGAGCCGGCGCACCGGCCCTGAGGGGGAAGCACTCAGTACTCCCAGAAGATCCGCTGCAGCTCTTTGCTGTCCTG‑GGTCTTGGTCA‑‑‑TCGCTACCATCGCCAGGATCCGCGCTTTTTGCGGGTTCAGGTCGTGAGCCACGACCCAGTCGTTCTTGTC > NC_002947/2799036‑2799324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |