Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 220,563 A→T 7.8% intergenic (+20/‑108) PP_0168 → / → PP_5431 putative surface adhesion protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947220,5630AT 7.8% 151.4 / 3.4 60intergenic (+20/‑108)PP_0168/PP_5431putative surface adhesion protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (32/22);  new base T (2/3);  total (34/26)
Fisher's exact test for biased strand distribution p-value = 6.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.78e-01

CCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAA  >  NC_002947/220416‑220708
                                                                                                                                                   |                                                                                                                                                 
ccGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAg                                                                                                                                                  >  8:381826/1‑149 (MQ=255)
  gAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCg                                                                                                                                                >  6:209301/1‑149 (MQ=255)
  gAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCg                                                                                                                                                >  1:303633/1‑149 (MQ=255)
        ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGc                                                                                                                                              <  5:264743/145‑1 (MQ=255)
        ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGc                                                                                                                                              >  6:264743/1‑145 (MQ=255)
         gtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCgg                                                                                                                                         <  2:246230/149‑1 (MQ=255)
          tATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGc                                                                                                                                        <  7:89680/149‑1 (MQ=255)
            tCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggtg                                                                                                                                       <  6:13587/148‑3 (MQ=255)
              gCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCtt                                                                                                                                    >  3:388383/1‑149 (MQ=255)
                cAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTc                                                                                                                                  >  6:343139/1‑149 (MQ=255)
                cAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTc                                                                                                                                  >  5:124170/1‑149 (MQ=255)
                        aCGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTAcc                                                                                                                          >  3:284786/1‑149 (MQ=255)
                           tcaCCATCACGCTGCAAGGCTAAATGTGGTAAAACCACACTATCAACTCGTTGATACGGGGCGCCTATCCCACCATCATCATCCAAAACAAGCACAGCTCACACCCCCCCGGGGCCGCACAGGGGCCCCGGCTCTTTCCTGCTACCCGc                                                                                                                       <  4:388383/147‑1 (MQ=255)
                                    aGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAgcg                                                                                                               >  6:58343/1‑148 (MQ=255)
                                       tGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCATGCTACCCGCCAACAGCGCAt                                                                                                            >  5:96108/1‑148 (MQ=255)
                                         gAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCTACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATAct                                                                                                         <  7:381826/149‑1 (MQ=255)
                                           aGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActct                                                                                                       >  6:29562/1‑149 (MQ=255)
                                               gTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGgcg                                                                                                   >  3:386616/1‑149 (MQ=255)
                                                  aaCTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCg                                                                                                >  5:132694/1‑149 (MQ=255)
                                                    cTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCAACGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCggg                                                                                              >  7:259062/1‑149 (MQ=255)
                                                    cTGGTCAACCCAGACGATCACCTCGTTTATCAGCGGCGCCGATCCGACCATCTTCATCCACAACAAGCACACCTCACCCACCACGGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCggg                                                                                              <  1:128857/149‑1 (MQ=255)
                                                       gTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTgg                                                                                                     >  3:379044/1‑139 (MQ=255)
                                                          tAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCaa                                                                                                                    >  5:105656/1‑121 (MQ=255)
                                                              ctacctaTCAACTCGTTTATCTGGGGCGCCGACCCCACAATCATCATCCAAAAAAAGCACCGCTCACACACCACGGGGCCCGCACTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGcc                                                                                    <  8:247745/143‑1 (MQ=255)
                                                               aGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCAACCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGccc                                                                                   >  1:284780/1‑149 (MQ=255)
                                                                    aTCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGa                                                                              >  6:311139/1‑149 (MQ=255)
                                                                      cacctctTTTATCAGCGGCGCCTATCCCACCATCATCATCCACAACACGCACAGCTCACAGACCACCGGGGCCGCACCGCGCCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCGCGCAGGCCCGGCgcca                                                                            <  2:122792/146‑4 (MQ=255)
                                                                         cTCGTTTATCAGCGGCGCCTATCCGACCATCATCATCCAAAACAAGGACCGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt                                                                         <  6:96108/149‑1 (MQ=255)
                                                                            gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGcc                                                                      >  6:183549/1‑149 (MQ=255)
                                                                            gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc                                                                       <  8:259062/148‑1 (MQ=255)
                                                                               gATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCGATCCTGCTACCCGCCACAAGCTAATCATCTGGCGGCGTGCCTGCGCGCCAGGCGCTCTTTGCGTAt                                                                   >  8:366334/1‑149 (MQ=255)
                                                                                aTCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtg                                                                  >  5:212381/1‑149 (MQ=255)
                                                                                  ctgcggcgCCGATCCTACCATCATCATCCAAAACAAGGACAGCTTACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgc                                                                 <  4:284786/146‑1 (MQ=255)
                                                                                         gcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTc                                                          >  1:255990/1‑148 (MQ=255)
                                                                                         gcCGATCCGACCATCATCAACCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCt                                                         <  2:284780/149‑1 (MQ=255)
                                                                                            gATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGGTGTTTGGCGATGctgctggcgac                                                       >  3:246756/1‑143 (MQ=255)
                                                                                               ccGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaa                                                    >  2:232486/1‑148 (MQ=255)
                                                                                                 gACCATCATCATCCACAACAAGGACAGCTCACAGCCCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaacaa                                                 <  7:28706/149‑1 (MQ=255)
                                                                                                    catcatcatCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAgg                                               >  2:26681/1‑148 (MQ=255)
                                                                                                      tcatcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGaaa                                            <  1:284378/149‑1 (MQ=255)
                                                                                                          catcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaacaac                                        <  5:183549/149‑1 (MQ=255)
                                                                                                            tcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGt                                      <  5:343139/149‑1 (MQ=255)
                                                                                                              cacaACACGCACAGCTCACAGACCACGGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGa                                    <  4:386616/149‑1 (MQ=255)
                                                                                                               acaacaAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCACGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGAc                                   >  6:207614/1‑149 (MQ=255)
                                                                                                                  acaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAg                                >  2:268069/1‑149 (MQ=255)
                                                                                                                   cacggACAGCTGACACCCCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg                               <  6:132694/146‑1 (MQ=255)
                                                                                                                          aGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCg                        <  2:255990/149‑1 (MQ=255)
                                                                                                                             tGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCa                     >  6:328581/1‑149 (MQ=255)
                                                                                                                                cAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGt                  <  1:26681/149‑1 (MQ=255)
                                                                                                                                 aGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGt                  >  7:89749/1‑148 (MQ=255)
                                                                                                                                  gACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg                               >  7:2306/1‑134 (MQ=255)
                                                                                                                                  gACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg                               <  8:2306/134‑1 (MQ=255)
                                                                                                                                     cacgGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTAc             <  5:29562/149‑1 (MQ=255)
                                                                                                                                      accGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACg            <  1:232486/149‑1 (MQ=255)
                                                                                                                                       ccGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGACAACACCGCATACAATGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGACTATGATGCTGTCTACCAAAAACGAAACAAAGTGACCAGGGAAATCGCCATGTTCTACGt           >  6:4060/1‑149 (MQ=255)
                                                                                                                                        cGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGCTCTTTTCCTATGCTGCGGTCTACCAACAAGGAAACAAACTGACGAGGGCCAACGCCATGTTATACGTg          >  4:379677/1‑149 (MQ=255)
                                                                                                                                            gCCGCACAGCGGCCCCGGCGCTTTCCTGCTCCCCGCCCACAGCGCATCCTCTGGCGCCGGGCCTGCGCTCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaac      <  6:318490/149‑1 (MQ=255)
                                                                                                                                             ccGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacg     >  3:97876/1‑149 (MQ=255)
                                                                                                                                              cGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg                               >  6:74991/1‑122 (MQ=255)
                                                                                                                                              cGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAgg                               <  5:74991/122‑1 (MQ=255)
                                                                                                                                                cacaGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgcaacgcaa  >  7:245289/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAA  >  NC_002947/220416‑220708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑