| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,844,678 | A→T | 6.9% | intergenic (‑38/+42) | PP_2495 ← / ← PP_2496 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,844,678 | 0 | A | T | 6.9% | 213.4 / 5.2 | 72 | intergenic (‑38/+42) | PP_2495/PP_2496 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (33/33); new base T (2/3); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.58e-01 | |||||||||||
TTGCTTGCGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCC > NC_002947/2844533‑2844820 | ttgcttgcGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAAc > 6:333274/1‑148 (MQ=255)ttgcttgcGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAAc > 7:15779/1‑148 (MQ=255) gcGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGc < 5:333274/147‑1 (MQ=255) gATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTc < 2:293670/149‑1 (MQ=255) aTCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGAGCTGCCACGAAGCGGGTCg > 6:241534/1‑149 (MQ=255) gCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCg > 1:248002/1‑149 (MQ=255) cAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGc < 8:15779/147‑1 (MQ=255) cAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGt > 6:129804/1‑149 (MQ=255) cAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCCGCTTCGTTGCAGGTCgg < 6:157239/145‑1 (MQ=255) aGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGt > 1:192187/1‑148 (MQ=255) ccAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTAt > 4:393667/1‑149 (MQ=255) ccAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCCGCTTCGTTGCAGGTCGGGCGtttc > 2:51322/1‑147 (MQ=39) cAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATg < 2:192187/149‑1 (MQ=255) aGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATgg < 8:237645/149‑1 (MQ=255) aGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATgg < 2:248002/149‑1 (MQ=255) cTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTg < 1:400077/149‑1 (MQ=255) cTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCCGCTTCGTTGCAGGTCGGGCGtttctattt < 1:51322/148‑8 (MQ=38) tCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTgg > 7:51398/1‑149 (MQ=255) tCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTgg > 1:249266/1‑149 (MQ=255) gcgGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTgg < 3:393667/147‑1 (MQ=255) ggggTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGAtt < 3:282161/149‑1 (MQ=255) cTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑Taaaa < 7:232194/149‑1 (MQ=255) cTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAg < 4:45959/147‑1 (MQ=255) gTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAgg > 1:70722/1‑149 (MQ=255) gTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAgg > 1:70724/1‑149 (MQ=255) tGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCCGCTTCGTTGCAGGTCGGGCGtttctat < 2:240816/126‑6 (MQ=37) tAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGAc > 2:39754/1‑149 (MQ=255) aCCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGAc < 3:61915/147‑1 (MQ=255) ccAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTACATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACCAAGCTGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGCCGACCaa > 5:92313/1‑149 (MQ=255) aGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTggg < 1:349296/123‑1 (MQ=255) aGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTggg > 2:349296/1‑123 (MQ=255) cgcAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCa < 4:96163/149‑1 (MQ=255) ggACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTAt > 5:85614/1‑149 (MQ=255) gACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATc > 3:402144/1‑149 (MQ=255) gACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATc > 4:15281/1‑149 (MQ=255) ttttGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGgc < 5:129804/149‑1 (MQ=255) tGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTg > 1:57489/1‑149 (MQ=255) gTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTTCATAAATAGAAACGCCCGAACCTCAACGAAGCGGGTCGGGGGTTATGGGGTGGGATTGGCTAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGtt < 1:289043/147‑1 (MQ=255) gTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCt > 4:138011/1‑149 (MQ=255) tgctgcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCtt < 3:15281/149‑1 (MQ=255) gctgcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCtt > 3:197406/1‑148 (MQ=255) ctgcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGa > 6:417284/1‑149 (MQ=255) ctgcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGa < 4:197406/149‑1 (MQ=255) ctgcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGa < 4:132894/149‑1 (MQ=255) tgcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGAt > 6:111419/1‑149 (MQ=255) gcGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGAtt > 1:250518/1‑149 (MQ=255) ttCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTggg < 2:70724/149‑1 (MQ=255) ttCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTggg > 5:22932/1‑149 (MQ=255) tCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTggg < 2:70722/148‑1 (MQ=255) aGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTgg < 1:39754/149‑1 (MQ=255) gCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCg > 3:376576/1‑148 (MQ=255) tttCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAAc < 4:376576/149‑1 (MQ=255) tttCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAAc > 6:40233/1‑149 (MQ=255) tttCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAAc > 4:348981/1‑149 (MQ=255) tAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCTACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGc < 2:250518/149‑1 (MQ=255) tAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGc < 5:417284/149‑1 (MQ=255) gtgtTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCg < 6:22932/148‑1 (MQ=255) tgtTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGa < 4:111024/149‑1 (MQ=255) ttGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTCGCCGAACCAGGCGGAGTCGAGGc > 2:197118/1‑149 (MQ=255) gCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCgg > 4:111596/1‑149 (MQ=255) gCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCg < 7:364830/148‑1 (MQ=255) gCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGCCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGc < 5:111419/147‑1 (MQ=255) cAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCgg < 2:249266/148‑1 (MQ=255) cAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGt > 3:9129/1‑149 (MQ=255) gAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTCCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTAt > 5:36451/1‑149 (MQ=255) aTAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCg < 8:51398/149‑1 (MQ=255) ccataaCGCCCGACCCGCTTCGTTGCAGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCgg > 3:155493/5‑149 (MQ=38) aaCGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGtgct > 8:101046/1‑149 (MQ=255) gCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCg > 5:3477/1‑149 (MQ=255) aCCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGccc < 4:9129/149‑1 (MQ=255) gCAACGTAGCGGGTCGGGCGTTATGGGGTGGGATTTG‑TAATAGGTCAGGCGTCCATTTGGAGGGCAGTATCCTAGGCGGGTTGCTTGATTTGGGCACCCTGGGCGAACCAGGCGGAGTCGAGGCGGTATTCGGtgctgc < 8:29085/139‑1 (MQ=255) gCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGAGCGTTGCTTGATTTGGGCACCATGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGtgctga > 7:29085/1‑138 (MQ=255) | TTGCTTGCGGATCTGCAGCCAGTCCTCGCGGGGTAGCTCCTTGGTGCTAACCAGGCGCAGAGCGGGACGGATTTTGCTGGTGCTGCGATTCAATGAAGTGGCTTTCATAGTGTTCACCTTGCAGAAATAGAAACGCCCGACCTGCAACGAAGCGGGTCGGGCGTTATGGGGTGGGATTGG‑TAAAAGGTCAGGCGACCAATTGCAGGGCAGTATCCAAGGCGCGTTGCTTGATTTGGGCACCCTGGCCGAACCAGGCGGAGTCGAGGCGGTATTCGGTGCTGCGTGCCC > NC_002947/2844533‑2844820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |