Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,131,465 C→T 6.4% S115L (TCG→TTG)  PP_2748 → ABC transporter ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,131,4650CT 6.4% 181.8 / 2.5 62S115L (TCG→TTG) PP_2748ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (30/28);  new base T (2/2);  total (32/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01

ATGCCGGCCAGCTGTTCTTCGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGC  >  NC_002947/3131321‑3131612
                                                                                                                                                 |                                                                                                                                                   
aTGCCGGCCAGCTGTTCTTCGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGt                                                                                                                                                 <  1:256815/149‑1 (MQ=255)
aTGCCGGCCAGCTGTTCTTCGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGt                                                                                                                                                 >  2:169059/1‑149 (MQ=255)
    cGGCCAGCTGTTCTTCGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACACTGCGCTGTTCAAGAAGATGAGTGTGCTGGACACCCTGCTCACCGGTCTGTCGCGTTTcc                                                                                                                                             >  6:339706/1‑149 (MQ=255)
     ggCCAGCTGTTCTTCGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCa                                                                                                                                            <  4:338421/149‑1 (MQ=255)
          gCTGTTCTTCGCCACCGAGCCGTTGCGCCTGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCa                                                                                                                                       <  7:158643/149‑1 (MQ=255)
              ttcttcGTCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTa                                                                                                                                   <  1:360936/149‑1 (MQ=255)
              ttcttcGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGt                                                                                                                                     >  1:100849/1‑148 (MQ=255)
                 ttcGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACt                                                                                                                                 >  4:260318/1‑148 (MQ=255)
                   cGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACt                                                                                                                                 <  3:260318/146‑1 (MQ=255)
                    gCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAgcgc                                                                                                                                        <  8:378420/138‑1 (MQ=255)
                    gCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAgcgc                                                                                                                                        >  7:378420/1‑138 (MQ=255)
                       aCCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTTGCGTTTCCAGCGCAGTTACTTTCTCg                                                                                                                           >  2:100770/1‑148 (MQ=255)
                                  gcgcCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTg                                                                                                                <  7:111002/148‑1 (MQ=255)
                                   cgcCGGGCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTggg                                                                                                              <  2:106590/149‑1 (MQ=255)
                                   cgcCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTgg                                                                                                               <  6:249047/148‑1 (MQ=255)
                                    gccggccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGc                                                                                                             >  5:259594/1‑149 (MQ=255)
                                      cggccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCt                                                                                                           <  7:244185/149‑1 (MQ=255)
                                        gccgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGc                                                                                                         >  7:144494/1‑149 (MQ=255)
                                          cgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTcgc                                                                                                                                                   <  5:11230/105‑1 (MQ=255)
                                          cgCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTcgc                                                                                                                                                   >  6:11230/1‑105 (MQ=255)
                                           gCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTTGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCACTGGGCCTGCCAc                                                                                                      >  7:87472/1‑149 (MQ=255)
                                               ccGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTgg                                                                                                               >  3:222039/1‑136 (MQ=255)
                                               ccGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTgg                                                                                                               <  4:222039/136‑1 (MQ=255)
                                               ccGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGc                                                                                                  >  3:257584/1‑149 (MQ=255)
                                                                gcTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCggg                                                                                 <  8:41768/149‑1 (MQ=255)
                                                                     gggATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCttt                                                                             >  8:155929/1‑149 (MQ=255)
                                                                       gATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTg                                                                           <  8:144494/149‑1 (MQ=255)
                                                                       gATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTg                                                                           >  5:365807/1‑149 (MQ=255)
                                                                            gCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGcgcg                                                                                          >  6:36365/1‑129 (MQ=255)
                                                                            gCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGcgcg                                                                                          <  5:36365/129‑1 (MQ=255)
                                                                                        aGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCttt                                                                             <  7:10022/130‑1 (MQ=255)
                                                                                        aGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCttt                                                                             >  8:10022/1‑130 (MQ=255)
                                                                                         gAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAgg                                                         <  5:295682/149‑1 (MQ=255)
                                                                                          aaCAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGt                                                        >  6:53170/1‑149 (MQ=255)
                                                                                                  gcTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGt                                                <  7:155929/149‑1 (MQ=255)
                                                                                                  agggggcAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGt                                                <  1:349799/143‑1 (MQ=255)
                                                                                                      ttCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCt                                            >  5:267121/1‑149 (MQ=255)
                                                                                                      ttCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCt                                            >  7:71657/1‑149 (MQ=255)
                                                                                                         aagaagATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAgcgcg                                                                  >  5:197755/1‑124 (MQ=255)
                                                                                                         aagaagATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAgcgcg                                                                  <  6:197755/124‑1 (MQ=255)
                                                                                                             agaTGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTg                                     >  2:367841/1‑149 (MQ=255)
                                                                                                              gaTGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGc                                    <  2:100849/149‑1 (MQ=255)
                                                                                                                   gtgtGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCAGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAAccc                               >  4:92480/1‑149 (MQ=255)
                                                                                                                    tgtgCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCt                              >  1:321683/1‑149 (MQ=255)
                                                                                                                      tgCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTgg                            >  3:35350/1‑149 (MQ=255)
                                                                                                                       gCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGgc                           >  7:187104/1‑149 (MQ=255)
                                                                                                                          ggACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGgcgc                         >  7:146776/1‑148 (MQ=255)
                                                                                                                           gtctaCCTGCTCAGCGGGCGGTTGCGTTTCGCGCGGAGTTTCTTTCTCGACCTGGCCCTTGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGGGCGCCGAGCAGGTGCTTGCGTTCCTCGAGCTGCAACCCTGGCGCGa                       <  8:87472/145‑1 (MQ=255)
                                                                                                                           gACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGa                       >  2:274316/1‑149 (MQ=255)
                                                                                                                           gACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGa                       >  4:49599/1‑149 (MQ=255)
                                                                                                                            aCAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCGGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGAt                      <  8:146776/149‑1 (MQ=255)
                                                                                                                                ccTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTg                  <  6:365807/149‑1 (MQ=255)
                                                                                                                                ccTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTg                  >  8:257914/1‑149 (MQ=255)
                                                                                                                                    cTCACCGGTCTGTTGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGTCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGcc                <  1:100770/147‑1 (MQ=255)
                                                                                                                                    cTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGTGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGt              <  5:339706/149‑1 (MQ=255)
                                                                                                                                    cTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGcc                <  1:367841/147‑1 (MQ=255)
                                                                                                                                       aCCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTggg           <  7:257914/149‑1 (MQ=255)
                                                                                                                                         cGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCGGCAACCCTGGCGCGATGTTGCCGTggg           >  2:288267/1‑147 (MQ=255)
                                                                                                                                           gTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGc       >  1:69025/1‑149 (MQ=255)
                                                                                                                                            tCTGGCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGcc      <  3:376987/149‑1 (MQ=255)
                                                                                                                                              tGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTg    >  2:257149/1‑149 (MQ=255)
                                                                                                                                                tCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTgg   <  6:267121/148‑1 (MQ=255)
                                                                                                                                                tCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTgg   <  1:274316/148‑1 (MQ=255)
                                                                                                                                                tCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGc  >  3:375893/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
ATGCCGGCCAGCTGTTCTTCGCCACCGAGCCGTTGCGCCGGCCGCACCCGCTGCAGGCGGCGCGGCTGGGGATCGGCCGTACCTTCCAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCCCGGCGCGAGGCCCGGGCTTTTGCCGAGCGCGCCGAGCAGGTGCTGGCGTTCCTCGAGCTGCAACCCTGGCGCGATGTTGCCGTGGGCAGCCTGGC  >  NC_002947/3131321‑3131612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: