| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,470,062 | T→G | 6.0% | intergenic (+123/+10) | PP_3083 → / ← PP_3084 | membrane protein/ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,470,062 | 0 | T | G | 6.0% | 264.5 / 6.5 | 84 | intergenic (+123/+10) | PP_3083/PP_3084 | membrane protein/ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base T (37/42); new base G (3/2); total (40/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
CGGTGCTGCTGGCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCACC > NC_002947/3469914‑3470201 | cGGTGCTGCTGGCTTGTTGGATGTAAGGCTGTTCTGGCCTTTTCGCGGGATTGTCCGTGAAATTGGAGTGTCTATGACATCATGTTCTGCGGATGCACGGGTGGCACGCTGCATTAACTTTAGAGTATTCAGCTTTGAGCCTTGCtcat < 4:376341/149‑1 (MQ=255) ggTGCTGCTGGCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCtcatc < 6:233792/149‑1 (MQ=255) ctgctgGCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAgg < 2:344462/149‑1 (MQ=255) ctgctgGCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAg < 1:92614/148‑1 (MQ=255) tgGCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTc < 8:3245/149‑1 (MQ=255) gCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCt < 1:339982/148‑1 (MQ=255) ttGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCt > 5:40021/1‑146 (MQ=255) ttGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGATGAGCAAGGctgaacgc < 8:98986/149‑8 (MQ=255) gtggATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGaa < 7:182634/148‑1 (MQ=255) tggATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGATGAGCAAGGctgaa < 6:23213/142‑5 (MQ=255) tggATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGATGAGCAAGGctgaa > 5:23213/1‑138 (MQ=255) gATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTc > 5:311107/1‑148 (MQ=255) tGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTa > 6:387685/1‑148 (MQ=255) gTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTATGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTac > 7:123010/1‑148 (MQ=255) gTAAGCCTGTTCTGGACTTATCGCGGGCTTGTCAGTGAAAGGCCAGTGTCAATCACATCATTTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTAAGACTTGCTCATCAAGGCGTCTTAGAAGTCTaca < 6:395753/149‑1 (MQ=255) gtaGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTaca < 5:390841/146‑1 (MQ=255) aGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTg > 8:54914/1‑149 (MQ=255) aGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACACGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTg > 1:149988/1‑149 (MQ=255) ccTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGc > 6:119846/1‑149 (MQ=255) gTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTc > 1:69591/1‑128 (MQ=255) gTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTc < 2:69591/128‑1 (MQ=255) gTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGa > 3:384648/1‑149 (MQ=255) ttCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGa < 6:183732/148‑1 (MQ=255) cTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGAc > 7:365589/1‑147 (MQ=255) gCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAgc < 2:276495/148‑1 (MQ=255) gcgGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAAccc > 1:24288/1‑149 (MQ=255) cgGGCTTGTCCGTGAAAGGCAAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGATGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCcg > 6:11318/1‑149 (MQ=255) gggCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCcgc < 6:40021/149‑1 (MQ=255) gggCTTGTCCGTGAAAGGCCAGTGCCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCcgc > 8:321193/1‑149 (MQ=255) gggCTTGTCAGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAATCGCAAAACCcgc < 6:311107/149‑1 (MQ=255) cTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCgcggc < 7:321193/149‑1 (MQ=255) cGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCt > 8:29977/1‑149 (MQ=255) gTGAAAGGCCAGTGGCAATAACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCtt > 6:68903/1‑149 (MQ=255) aaaGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCg < 8:123010/149‑1 (MQ=255) aaGACCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGt > 4:37255/1‑149 (MQ=255) ccAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAgg < 3:37255/149‑1 (MQ=255) ccAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAgg < 3:268118/149‑1 (MQ=255) ccAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAgg > 1:211814/1‑149 (MQ=255) cAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACGAGCGCAAAACCCGCGGCGTACCTTGCGTCAgg > 8:8336/1‑148 (MQ=255) aGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCcg < 4:30188/128‑1 (MQ=255) aGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCcg > 3:30188/1‑128 (MQ=255) aGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTTAGGTa < 2:149988/149‑1 (MQ=255) gTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAg < 1:28456/149‑1 (MQ=255) tGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAgt > 1:250234/1‑149 (MQ=255) cAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGTGTACCTTGCGTCAGGTAgttgt < 3:146091/149‑1 (MQ=255) aTCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTc < 2:71133/149‑1 (MQ=255) tCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTc > 4:132188/1‑148 (MQ=255) acaTCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAg < 3:132188/149‑1 (MQ=255) catcatGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAgg < 7:54914/149‑1 (MQ=255) atcatGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCATGCGTCAGGTAGTTGTTCGAg < 2:183713/147‑1 (MQ=255) atcatGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCATGCGTCAGGTAGTTGTTCGAg > 1:183713/1‑147 (MQ=255) tcatGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTc < 2:250234/149‑1 (MQ=255) tcatGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCATACCTTGCGTCAGGTAGTTGTTCGAGGTc > 3:11935/1‑149 (MQ=255) atGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACGAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCg < 7:8336/148‑1 (MQ=255) ttCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGc < 4:384648/149‑1 (MQ=255) tGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCg > 6:80962/1‑148 (MQ=255) cGGATGCACACGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCTTACCTTGCGTCATGTAGTTGTTCGAGGTCGACGCCGaa < 8:365589/148‑1 (MQ=255) ggATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTGAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTCCCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGc > 6:72178/1‑149 (MQ=255) aCCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCaaa < 8:175744/93‑1 (MQ=255) aCCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCaaa > 7:175744/1‑93 (MQ=255) aCCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAgg > 6:261083/1‑117 (MQ=255) aCCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAgg < 5:261083/117‑1 (MQ=255) aCCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTa > 2:7783/1‑149 (MQ=255) cccGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTAc < 2:24288/149‑1 (MQ=255) ggCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCtt > 6:206429/1‑149 (MQ=255) gCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGATGCCGAAGCCCAGTACGCCTTg < 5:387685/149‑1 (MQ=255) cccTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTc < 5:11318/149‑1 (MQ=255) ccTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGtt > 7:133696/1‑147 (MQ=255) ccTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGtt < 8:133696/147‑1 (MQ=255) ccTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCg > 4:268786/1‑149 (MQ=255) tttAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTtctc > 1:200432/1‑148 (MQ=255) gACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACAt > 1:62247/1‑149 (MQ=255) cGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTg < 5:80962/149‑1 (MQ=255) cTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGgc < 7:162495/149‑1 (MQ=255) cTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCATACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGgc < 4:11935/149‑1 (MQ=255) cGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑Caa < 5:68903/149‑1 (MQ=255) acgCCTTGATGAGCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGt > 1:103194/3‑148 (MQ=255) aGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCa > 5:330201/1‑149 (MQ=255) gCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCgcgg < 5:303615/59‑1 (MQ=255) gCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCgcgg > 6:303615/1‑59 (MQ=255) gCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCAc < 5:119846/149‑1 (MQ=255) gCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCAc < 2:211814/149‑1 (MQ=255) gCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATT‑GCGCGCCAATGtgga < 2:200432/149‑4 (MQ=255) gCCTTGATGAGCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCAc > 2:206123/1‑149 (MQ=255) ccTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCAcc > 6:67921/1‑149 (MQ=255) ccTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCAcc > 3:398940/1‑149 (MQ=255) | CGGTGCTGCTGGCTTGGTGGATGTAAGCCTGTTCTGGCCTTTTCGCGGGCTTGTCCGTGAAAGGCCAGTGGCAATCACATCATGTTCTGCGGATGCACCCGGGGCACCCTGCAGGAACTTTAGACGCTGCAGCGTTCAGCCTTGCTCATCAAGGCGTCTTAGAAGTCTACACTGGCCGACAAGCGCAAAACCCGCGGCGTACCTTGCGTCAGGTAGTTGTTCGAGGTCGACGCCGAAGCCCAGTACGCCTTGTTCGCCACGTTCTCCACATTGGCGCG‑CAATGTCACC > NC_002947/3469914‑3470201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |