Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,493,652 A→C 5.7% L184R (CTG→CGG)  PP_3097 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,493,6520AC 5.7% 221.7 / 2.8 70L184R (CTG→CGG) PP_3097hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (33/33);  new base C (2/2);  total (35/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

CCCACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCA  >  NC_002947/3493505‑3493797
                                                                                                                                                   |                                                                                                                                                 
cccACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAg                                                                                                                                                  >  2:227512/1‑149 (MQ=255)
  cACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGc                                                                                                                                                <  4:263256/149‑1 (MQ=255)
    cGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCgg                                                                                                                                              >  1:384482/1‑149 (MQ=255)
     ggTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCCTGCGGt                                                                                                                                             >  6:178913/1‑149 (MQ=255)
     ggTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGt                                                                                                                                             <  4:372098/149‑1 (MQ=255)
     ggTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGt                                                                                                                                             >  7:385784/1‑149 (MQ=255)
       ttttCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTc                                                                                                                                           <  8:48155/149‑1 (MQ=255)
         ttCAGGGCATCGGCCGTCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGAGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACAGCAGGCGGTTCAt                                                                                                                                         >  4:45021/1‑149 (MQ=255)
           cAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATg                                                                                                                                        <  5:332579/148‑1 (MQ=255)
            aGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCCTGCGGTTcttcct                                                                                                                                      <  5:178913/149‑6 (MQ=255)
                    ggccggcAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGc                                                                                                                               <  8:385784/148‑1 (MQ=255)
                     gccggcAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGccc                                                                                                                             <  2:59412/149‑1 (MQ=255)
                            gcgcCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      <  4:404095/149‑1 (MQ=255)
                                 aCCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATc                                                                                                                 <  8:160247/149‑1 (MQ=255)
                                  ccTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCg                                                                                                                >  6:227510/1‑149 (MQ=255)
                                  ccTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGAATCg                                                                                                                >  1:16139/1‑149 (MQ=255)
                                   cTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGc                                                                                                               <  3:45021/149‑1 (MQ=255)
                                   cTCGCGGCTGCGGCCCTGGTCGTAGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGc                                                                                                               >  8:208072/1‑149 (MQ=255)
                                        ggCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTg                                                                                                          <  7:50017/149‑1 (MQ=255)
                                         gCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTgg                                                                                                         >  8:95899/1‑149 (MQ=255)
                                          cTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGc                                                                                                        >  5:60979/1‑149 (MQ=255)
                                           tGCGGCCCTGGTCGTCGAAGCTAAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       >  1:20001/1‑149 (MQ=255)
                                             cGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       <  2:20001/147‑1 (MQ=255)
                                             cGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       <  1:357141/147‑1 (MQ=255)
                                             cGGCCCGGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       <  3:355440/147‑1 (MQ=255)
                                                cccTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAg                                                                                                  >  2:386969/1‑149 (MQ=255)
                                                  cTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCCAACAGGGCATCGCCAGTGGCTGCCAGGc                                                                                                <  1:227512/149‑1 (MQ=255)
                                                   tGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGt                                                                                                                                       >  7:183448/1‑109 (MQ=255)
                                                   tGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGt                                                                                                                                       <  8:183448/109‑1 (MQ=255)
                                                      tcgtcgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       <  1:277666/138‑1 (MQ=255)
                                                      tcgtcgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCt                                                                                                       >  2:277666/1‑138 (MQ=255)
                                                         tcgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATgcg                                                                                         >  6:290217/1‑149 (MQ=255)
                                                         tcgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATgcg                                                                                         <  1:386969/149‑1 (MQ=255)
                                                          cgAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATgcg                                                                                         >  8:213747/1‑148 (MQ=255)
                                                            aaGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAg                                                                                      <  5:290217/149‑1 (MQ=255)
                                                                  aGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGa                                                                                  <  7:208072/147‑1 (MQ=255)
                                                                     gTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGAc                                                                             <  1:213201/149‑1 (MQ=255)
                                                                     gTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGGCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGAc                                                                             <  1:268170/149‑1 (MQ=255)
                                                                           ttGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTc                                                                       >  3:22651/1‑149 (MQ=255)
                                                                            tGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGc                                                                                <  7:380762/139‑1 (MQ=255)
                                                                            tGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGc                                                                                >  8:380762/1‑139 (MQ=255)
                                                                                gAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGgcgc                                                                  >  5:136352/1‑149 (MQ=255)
                                                                                   gttgttGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCtgt                                                               <  2:384482/149‑1 (MQ=255)
                                                                                         gAACAGCAGTTCGTACAGCTGCAGCATCAGGGGCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCg                                                          <  7:135940/148‑1 (MQ=255)
                                                                                             agcagTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGaa                                                     <  7:95899/149‑1 (MQ=255)
                                                                                              gcagTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAg                                                    >  6:197813/1‑149 (MQ=255)
                                                                                               cagTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAgg                                                   >  3:331881/1‑149 (MQ=255)
                                                                                                 gTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGTCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCTGATGCGAAGACGAGCGACCAGGTCGGCGCTGTGCACGTTGAAggac                                                 >  4:300474/1‑147 (MQ=255)
                                                                                                 gTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGc                                                  >  8:230144/1‑148 (MQ=255)
                                                                                                    cGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAg                                              >  1:236563/1‑149 (MQ=255)
                                                                                                     gTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGc                                             >  6:59040/1‑149 (MQ=255)
                                                                                                      tACAGCTGCAGCATCAGCGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATAGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCACTTGAAGGACGAGCg                                            >  3:384608/1‑149 (MQ=255)
                                                                                                       aCAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      <  2:390217/74‑1 (MQ=255)
                                                                                                       aCAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAgg                                                                                                                      >  1:390217/1‑74 (MQ=255)
                                                                                                               agcaTCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTc                                   <  5:272463/149‑1 (MQ=255)
                                                                                                                 caTCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCtg                                 >  3:314749/1‑149 (MQ=255)
                                                                                                                   tCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCAGCCCGAACAGGTCATCGCCACTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCGTTGCCCGTTGAAGGCCGAGCGTTCCATTTCtgt                                >  5:213755/1‑148 (MQ=255)
                                                                                                                      gggTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTgg                                                                                                         <  5:374066/72‑1 (MQ=255)
                                                                                                                      gggTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTgg                                                                                                         >  6:374066/1‑72 (MQ=255)
                                                                                                                       ggTCGCTTCGCCGTCGAGGAAGAACCGCAGCCGGTTCATCTCCATCTGCCCGAAAAGGGCATCGCCAGTGGCTGACAGGCGGAAGCGCAGACGAGCGACCACGTCGGCGCAGTGCCCGTTGAAGGCCCAGCGTTCCATTTCTCTGAAc                            >  4:63586/1‑148 (MQ=255)
                                                                                                                        gTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGa                          <  6:131192/149‑1 (MQ=255)
                                                                                                                                gCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCctgc                   <  5:227510/148‑1 (MQ=255)
                                                                                                                                   gTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCa               >  5:31436/1‑149 (MQ=255)
                                                                                                                                      ggacatgaaCCGCCTGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCt                                  >  8:208506/7‑127 (MQ=255)
                                                                                                                                      ggacatgaaCCGCCTGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCt                                  <  7:208506/121‑1 (MQ=255)
                                                                                                                                      gAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAg                         <  2:4409/136‑1 (MQ=255)
                                                                                                                                      gAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAg                         >  1:4409/1‑136 (MQ=255)
                                                                                                                                              aCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCa               >  7:354201/1‑138 (MQ=255)
                                                                                                                                              aCCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCa               <  8:354201/138‑1 (MQ=255)
                                                                                                                                                cGCAGGCGGTTCATGTCCATCTGCCCGAACAGCTCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATATCTGTGAACGAGGCCTGCTGCACGGCAATCGGCca  <  3:300474/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CCCACGGTTTTCAGGGCATCGGCCGGCAGCGCCACCTCGCGGCTGCGGCCCTGGTCGTCGAAGCTCAGCGTGGCCTTGGCGAGGTTGTTGAACAGCAGTTCGTACAGCTGCAGCATCAGGGTCGCTTCGCCGTCGAGGAAGAACCGCAGGCGGTTCATGTCCATCTGCCCGAACAGGGCATCGCCAGTGGCTGCCAGGCGGATGCGCAGACGAGCGACCAGGTCGGCGCTGTGCCCGTTGAAGGCCGAGCGTTCCATTTCTGTGAACGAGGCCTGCTGCACGGCAATCGGCCA  >  NC_002947/3493505‑3493797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑