| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,748,874 | A→C | 6.2% | intergenic (‑114/+81) | kefB‑II ← / ← PP_3312 | glutathione‑regulated potassium/H+ antiporter/heat shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,748,874 | 0 | A | C | 6.2% | 258.9 / 6.6 | 81 | intergenic (‑114/+81) | kefB‑II/PP_3312 | glutathione‑regulated potassium/H+ antiporter/heat shock protein |
| Reads supporting (aligned to +/- strand): ref base A (43/33); new base C (2/3); total (45/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
CCCAACAACAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATACGCAG > NC_002947/3748726‑3749020 | cccAACAACAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCa < 2:335428/149‑1 (MQ=255) aacaacAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGAGGCAGCt > 1:142883/1‑149 (MQ=255) aacaacAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACACTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCTCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATTTCGACTGCATGGGAAGCGGCAGCt > 8:202426/1‑149 (MQ=255) acaGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCTGCCGCTTccc < 2:345045/149‑2 (MQ=255) caGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTc > 4:320501/1‑146 (MQ=255) caGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTc < 3:320501/146‑1 (MQ=255) aGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTGAGGACCGTTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCTGCCGCTTcccat < 3:233801/149‑4 (MQ=255) aGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGt < 7:72805/149‑1 (MQ=255) tCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTg > 3:354500/1‑148 (MQ=255) cTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAg > 2:326577/1‑149 (MQ=255) cTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTg > 1:63851/1‑146 (MQ=255) ttCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAAAATCCAATGCATGGGAAGCGGCAGCATCCGGTGGAGCAACTgaag > 4:91755/1‑148 (MQ=255) cAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTgaagaa < 2:63851/148‑1 (MQ=255) cAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGaaa > 1:408025/1‑149 (MQ=255) gCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACAccc > 8:5169/1‑149 (MQ=255) aTGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAac > 5:179967/1‑142 (MQ=255) aTGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAac < 6:179967/142‑1 (MQ=255) gCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGaaa < 4:199622/138‑1 (MQ=255) gCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGaaa > 3:199622/1‑138 (MQ=255) gCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACAcccgcccg > 2:224386/1‑148 (MQ=255) cTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGTAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCa < 7:299867/149‑1 (MQ=255) cTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACAcccgcccg > 4:188792/1‑147 (MQ=255) ttCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACccgcccgcga > 3:148208/1‑147 (MQ=255) gCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcgg > 1:291954/1‑149 (MQ=255) ccccTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcggg > 3:402273/1‑149 (MQ=255) cccTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcgggc > 6:367230/1‑149 (MQ=255) ccTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATGGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcgggcg < 3:103415/149‑1 (MQ=255) cTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcgggcgg < 2:198317/149‑1 (MQ=255) tGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTgaa < 2:76785/116‑1 (MQ=255) tGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTgaa > 1:76785/1‑116 (MQ=255) tCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGcgggcggg < 8:189073/147‑1 (MQ=255) ggACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATa > 3:357883/1‑149 (MQ=255) aCCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACt > 5:85389/1‑149 (MQ=255) ccGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTg < 2:291954/149‑1 (MQ=255) cGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTgg < 2:408025/149‑1 (MQ=255) cGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTgg < 1:224386/149‑1 (MQ=255) ggTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGt > 4:55290/1‑149 (MQ=255) ggTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGt < 7:92210/149‑1 (MQ=255) gTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcgggcg < 4:50408/136‑1 (MQ=255) gTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCgcgggcg > 3:50408/1‑136 (MQ=255) ttATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGa < 2:142883/149‑1 (MQ=255) aTGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCTCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGTGTAATACTGGTGAc < 7:202426/148‑1 (MQ=255) gagaAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAgg > 6:168034/1‑149 (MQ=255) agaAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAggg > 1:181415/1‑149 (MQ=255) gACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATa < 6:220156/125‑1 (MQ=255) gACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATa > 5:220156/1‑125 (MQ=255) gACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTcccc > 3:192797/1‑147 (MQ=255) gACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTa < 6:85389/149‑1 (MQ=255) ttATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGt < 1:98791/124‑1 (MQ=255) ttATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGt > 2:98791/1‑124 (MQ=255) gCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGaa < 4:354500/149‑1 (MQ=255) gCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGaa > 1:3773/1‑149 (MQ=255) tcAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgcg > 5:22434/1‑149 (MQ=255) tcAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgcg > 3:174916/1‑149 (MQ=255) tcAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgcg > 7:129673/1‑149 (MQ=255) tcAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgcg > 1:205967/1‑149 (MQ=255) cGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCATCTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGc < 3:91755/148‑1 (MQ=255) cGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGc < 3:162063/148‑1 (MQ=255) gggATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCg > 7:178774/1‑149 (MQ=255) aTGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCAc < 1:326577/149‑1 (MQ=255) tgtgCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGcgggcggg > 6:303671/1‑84 (MQ=255) tgtgCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGcgggcggg < 5:303671/84‑1 (MQ=255) ccACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGcttgcttg > 4:403059/1‑149 (MQ=255) cACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGcttgcttg < 6:22434/148‑1 (MQ=255) aCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTg > 6:200781/1‑80 (MQ=255) aCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTg < 5:200781/80‑1 (MQ=255) aCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGcttgcttg > 7:245244/1‑147 (MQ=255) aCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGcttgcttg < 8:245244/147‑1 (MQ=255) aCTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTgg > 5:170840/1‑148 (MQ=255) tGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGc > 5:285693/1‑148 (MQ=255) gCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgc < 6:134666/118‑1 (MQ=255) gCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATgc > 5:134666/1‑118 (MQ=255) cATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAAt < 4:174916/149‑1 (MQ=255) cATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAAt < 2:205967/149‑1 (MQ=255) ccggAAGCTGCCGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGc < 7:239682/119‑1 (MQ=255) ccggAAGCTGCCGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGc > 8:239682/3‑121 (MQ=255) ccggAAGCTGCCGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTc > 2:48856/3‑149 (MQ=255) gAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGa > 6:210389/1‑148 (MQ=255) gAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGa > 7:105110/1‑148 (MQ=255) cGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATACgc < 8:105110/149‑1 (MQ=255) ggCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATACgca < 8:129673/149‑1 (MQ=255) gCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATACgcag > 3:61239/1‑149 (MQ=255) | CCCAACAACAGTCCTGCGTTGCCTTCAGCGGCCATGGCTTCGACCCTCAGCCCCTGTCAGGACCGGTTATGGAGAAAGTACCGGACGAATTATCGCTGGGCGTCTCAGTTCGCCTGGGATGTGCAATATCCACTGCATGGGAAGCGGCAGCTTCCGGTGGAGCAACTGAAGAAACACCCGCCCGCAGGTAGGTCGCGGGCGGGTAATACTGGTGACGAGGGGCTGTCCCCTAGCCTTCGCGAACCTCGATGCGCCTGCCACTCGCACGCGCTTGCTTGGGCAATTCGATACGCAG > NC_002947/3748726‑3749020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |