| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,880,378 | C→G | 6.7% | A738G (GCC→GGC) | mexF → | multidrug RND transporter MexF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,880,378 | 0 | C | G | 6.7% | 228.2 / 6.0 | 75 | A738G (GCC→GGC) | mexF | multidrug RND transporter MexF |
| Reads supporting (aligned to +/- strand): ref base C (37/33); new base G (2/3); total (39/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 | |||||||||||
CAAATCGAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAACGTCCAGGCCGAGCAGCAGTTC > NC_002947/3880239‑3880526 | cAAATCGAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCg > 1:44747/1‑149 (MQ=255) aaaTCGAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGGCGGCATCGActtg < 2:337104/149‑4 (MQ=255) aaaTCGAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCgg < 5:130689/149‑1 (MQ=255) aTCGAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGGCGGCATCGActtgtg > 1:173832/1‑144 (MQ=255) aTCGAAGACCGGGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGGCGGCATCGActtgtg < 3:304256/149‑6 (MQ=255) gAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGaa > 8:357030/1‑147 (MQ=255) aaGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGGCGGCATCGActtgt > 6:354222/1‑140 (MQ=255) aaGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGGCGGCATCGActtgt < 5:354222/144‑5 (MQ=255) tGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCgg < 8:7867/136‑1 (MQ=255) tGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCgg > 7:7867/1‑136 (MQ=255) ggCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGAc > 1:78169/1‑149 (MQ=255) ggaaCCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACAAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGAcc > 5:223109/3‑149 (MQ=255) aaCCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATc < 6:173501/126‑1 (MQ=255) aaCCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATc > 5:173501/1‑126 (MQ=255) aaCCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCa > 5:67646/1‑149 (MQ=255) aCCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCAc > 5:306590/1‑149 (MQ=255) gggTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGgtg > 2:5671/1‑149 (MQ=255) gtgaCGAAGCGCTGGACAAGGAAACCCAGAACATCATCGCCAAGATCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAACTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCGACGGtgtg < 4:336343/146‑1 (MQ=255) gTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGtgtg < 1:5671/149‑1 (MQ=255) aCGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGc > 1:261853/1‑148 (MQ=255) cGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATTCCGCCATCGACCGGGTAAAGGCCAAGACCCACGGtgtg > 8:61180/1‑145 (MQ=255) cGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGTAAAGGCCAAGACCCACGGtgtg < 7:61180/145‑1 (MQ=255) gAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGAt > 6:341776/1‑149 (MQ=255) tACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACa > 4:311679/1‑148 (MQ=255) aGGAAACCCAGAACATCATCGCCAAGAGCCTCAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTc > 1:33084/1‑149 (MQ=255) aGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTc < 2:44747/149‑1 (MQ=255) ggAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTc > 3:206434/1‑148 (MQ=255) ggAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCg < 6:30631/149‑1 (MQ=255) cggAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCt > 1:122760/3‑149 (MQ=255) aGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGAccc < 7:116936/114‑1 (MQ=255) aGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGAccc > 8:116936/1‑114 (MQ=255) aCATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAg < 5:341776/149‑1 (MQ=255) catcatCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAgg > 5:15034/1‑149 (MQ=255) gCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCt < 2:122760/149‑1 (MQ=255) ccAAGGGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTg < 2:38390/149‑1 (MQ=255) ccAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTg > 7:139959/1‑149 (MQ=255) cAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTgg > 2:186402/1‑149 (MQ=255) aaGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTggg > 1:185555/1‑149 (MQ=255) gagCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCt < 2:78169/149‑1 (MQ=255) cacaACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTgg < 4:396046/103‑1 (MQ=255) cacaACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTgg > 3:396046/1‑103 (MQ=255) acaACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTg > 2:351491/1‑149 (MQ=255) acaACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTg > 2:368367/1‑149 (MQ=255) aaCGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTa > 6:88925/1‑149 (MQ=255) ccAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCa < 5:179390/86‑1 (MQ=255) ccAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCa > 6:179390/1‑86 (MQ=255) cAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAAc < 4:206434/149‑1 (MQ=255) cAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAAc < 5:88925/149‑1 (MQ=255) cAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAAc < 1:368367/149‑1 (MQ=255) gCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCCGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGc > 4:256263/1‑149 (MQ=255) cTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCtt < 6:306590/149‑1 (MQ=255) cACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCaa > 4:400796/1‑129 (MQ=255) cACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCaa < 3:400796/129‑1 (MQ=255) cAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGCTCCCCGACATCTTCGACACCCTGCAGGTTTACATGGGCTCGCTGTACACCAACGACTTCAACCGCTATGGCCGCa > 7:379788/1‑149 (MQ=255) cAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCa > 8:232661/1‑149 (MQ=255) aGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGc < 4:20357/147‑1 (MQ=255) aGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCATTGGCCGc > 3:20357/1‑147 (MQ=255) ccAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTAc < 1:351491/148‑1 (MQ=255) cAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCa < 2:33084/149‑1 (MQ=255) aGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAg < 7:357030/149‑1 (MQ=255) aGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCCGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCACACTTACCAg < 3:256263/149‑1 (MQ=255) ggTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAgg < 6:67646/149‑1 (MQ=255) gTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCg > 6:237679/1‑105 (MQ=255) gTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCg < 5:237679/105‑1 (MQ=255) aaCGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCaa > 7:278928/1‑149 (MQ=255) aaCGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCaa > 7:330229/1‑149 (MQ=255) aaCGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCa < 8:139959/148‑1 (MQ=255) aCGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCaa > 5:409748/1‑121 (MQ=255) aCGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCaa < 6:409748/121‑1 (MQ=255) aCGTGCCACAAGTCGATGCCACCCTCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAAc < 8:128149/149‑1 (MQ=255) aaGTCTATGCCGCCATCGACCGGTAAAAGGACAAGACCCACGGTGTGGCTATCTCGGACATCTTCGTCAGCCTGCAGGTTTACCTGGGCTCGCTGTACTCCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAAc < 6:383946/140‑1 (MQ=255) aaGTCGATGCCGCCATCGACCGGGAAAAGTCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTATACCTGTGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAAc > 5:383946/1‑140 (MQ=255) gTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAACGTCCAGGcc > 7:367258/1‑147 (MQ=255) gTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAACGTCCAGGCCGa < 7:232661/149‑1 (MQ=255) gATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAACGTCCAGGCCGagc < 2:185555/148‑1 (MQ=255) ccATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAACGTCCAGGCCGAGCAGCAGTTc > 6:167756/1‑149 (MQ=255) | CAAATCGAAGACCGTGGCAACCTGGGTTACGAAGCGCTGTACAAGGAAACCCAGAACATCATCGCCAAGAGCCACAACGTCCCAGAGCTGGCAGGCCTGTTCACCAGCTACCAGGTCAACGTGCCACAAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGTGTGGCGATCACCGACATCTTCGACACCCTGCAGGTTTACCTGGGCTCGCTGTACACCAACGACTTCAACCGCTTTGGCCGCACTTACCAGGTCAACGTCCAGGCCGAGCAGCAGTTC > NC_002947/3880239‑3880526 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |