| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,896,083 | T→G | 5.5% | Q221P (CAG→CCG) | PP_3439 ← | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,896,083 | 0 | T | G | 5.5% | 231.1 / 2.7 | 72 | Q221P (CAG→CCG) | PP_3439 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (35/33); new base G (2/2); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
ACGGCTCCTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGT > NC_002947/3895939‑3896227 | aCGGCTCCTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTg < 2:82715/146‑1 (MQ=255)aCGGCTCCTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTg > 1:82715/1‑146 (MQ=255)aCGGCTCCTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGgcg > 2:102347/1‑149 (MQ=255) gCTCCTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCaa > 6:307050/1‑149 (MQ=255) cTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTgc < 2:274373/149‑1 (MQ=255) cAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGcc > 6:70489/1‑149 (MQ=255) aGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCggg > 3:137081/1‑149 (MQ=255) aGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGGCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCGGGCGCAGTTGCGCCAggg < 8:73483/149‑1 (MQ=255) gcgcCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGc < 5:307050/149‑1 (MQ=255) cccAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAg > 6:156709/1‑149 (MQ=255) ccAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGt > 1:254815/1‑149 (MQ=255) cAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTTTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGtt < 6:321830/149‑1 (MQ=255) cAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGtt < 4:137081/149‑1 (MQ=255) cAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGtt < 2:255334/149‑1 (MQ=255) tAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGGCTCCTGTGCAACGTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGGCTGTTGCAcg > 4:220418/1‑149 (MQ=255) cATTTCTGTAATGCCCCGGTGTCGCCGCGAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCTGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCAcg < 8:331079/140‑1 (MQ=255) cATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCAcgcatatagg > 7:331079/1‑141 (MQ=255) aTTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTa < 6:15553/149‑1 (MQ=255) tCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGc < 1:238290/148‑1 (MQ=255) tAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTa < 7:45690/149‑1 (MQ=255) gtgtCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGAGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATgcggc < 6:171608/149‑1 (MQ=255) aGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑aa < 7:48298/149‑1 (MQ=255) gCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAg < 6:60145/146‑1 (MQ=255) gCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAg > 5:60145/1‑146 (MQ=255) cTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGTCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGtt < 6:182470/149‑1 (MQ=255) cTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGt < 8:106620/148‑1 (MQ=255) gTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGt > 8:245964/1‑133 (MQ=255) gTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGt < 7:245964/133‑1 (MQ=255) tttGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCCAGCAGGTAGCCATgc < 1:371666/127‑1 (MQ=255) tttGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCCGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCCAGCAGGTAGCCATgc > 2:371666/1‑127 (MQ=255) ccGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCAc > 3:192133/1‑149 (MQ=255) cAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAAt < 1:102347/147‑1 (MQ=255) gtgCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGTCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAg > 4:290200/1‑149 (MQ=255) tgCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCa < 8:160713/143‑1 (MQ=255) tgCCTGATCAGCGAACACGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCa > 7:160713/1‑143 (MQ=255) gCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGAACGCGCTGGTCTAGCAGGTAGCCATGCGGCATCAGGCCG‑AAGCGTTGGCGaaa > 5:384296/1‑131 (MQ=255) gCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGAACGCGCTGGTCTAGCAGGTAGCCATGCGGCATCAGGCCG‑AAGCGTTGGCGaaa < 6:384296/131‑1 (MQ=255) ccTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTTGTCTAGc < 2:373808/92‑1 (MQ=255) ccTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGc > 1:373808/1‑92 (MQ=255) ccTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGAGTCCCTGTCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCATGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGa < 8:268884/148‑1 (MQ=255) cTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAg > 5:418990/1‑141 (MQ=255) cTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAg < 6:418990/141‑1 (MQ=255) aTCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGAcc > 8:208695/1‑146 (MQ=255) aGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCgaga > 3:373680/1‑147 (MQ=255) gCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAg > 6:90620/1‑149 (MQ=255) gCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAg > 8:385754/1‑149 (MQ=255) aaCCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACCCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGcc > 3:115554/1‑149 (MQ=255) ctGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCg > 7:262137/1‑148 (MQ=255) tgtgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTTGTCTAGCAGGTAGCCATGCGGCGTCAGGCCGCAAGCGTTGGCGAAAGGCACGAATCAGGTAGGa < 1:254720/126‑1 (MQ=255) tgtgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGa > 2:254720/1‑125 (MQ=255) tgtgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGACCG‑AAGCGTTGGCGAAAGGCAc < 2:93538/112‑1 (MQ=255) tgtgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAATTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGACCG‑AAGCGTTGGCGAAAGGCAc > 1:93538/1‑112 (MQ=255) gtgGAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACTCGCTCGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGAACGAGCCAGGCCTCAAGcccct > 3:213796/1‑145 (MQ=255) tgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAg < 3:243272/148‑1 (MQ=255) tgCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGGTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCCAGCCCCg > 8:216147/1‑145 (MQ=255) cAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGAt < 5:70489/148‑1 (MQ=255) tctttCAGCAATTGAGCGGCCCTGTCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGAt < 8:266422/144‑1 (MQ=255) aaCTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCAc < 1:237120/107‑1 (MQ=255) aaCTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCAc > 2:237120/1‑107 (MQ=255) ttCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCt > 3:244686/1‑149 (MQ=255) tCAGAAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCCCTGGTATAGCAGGTAGCCATGCGGCGACAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCACCGCAGAt > 7:266422/1‑143 (MQ=255) ttGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCt > 4:333435/1‑148 (MQ=255) gAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGAt > 7:220186/1‑134 (MQ=255) gAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGAt < 8:220186/134‑1 (MQ=255) gCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCg < 4:373680/149‑1 (MQ=255) gCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGTGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGcc < 2:146959/121‑1 (MQ=255) gCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGTGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGcc > 1:146959/1‑121 (MQ=255) gCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGt < 4:192133/149‑1 (MQ=255) gCCCGGGCGCAGTTGCGCCAGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGc < 2:341405/116‑1 (MQ=255) gCCCGGGCGCAGTTGCGCCAGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGc > 1:341405/1‑116 (MQ=255) gCCCGGGCGCAGTTGCGCCAGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGCCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAAACAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCGGAGCGGGt > 7:134861/1‑149 (MQ=255) cccTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGt > 5:273185/1‑148 (MQ=255) | ACGGCTCCTGCAGGAGCGCCCAGGCTAGCGACGGCATTTCTGTAATGCCCCGGTGTCGCCGCCAGGTGCTGTTTGAATGCCCGCTGCAGGTGTGCCTGATCAGCGAACCCGGCCTCCTGTGCAACTTCAGCAATTGAGCGGCCCTGGCGCAACTGCGCCCGGGCCAGTTGCACGCGCTGGTCTAGCAGGTAGCCATGCGGCGTCAGGCCG‑AAGCGTTGGCGAAAGGCACGAATCAGGTAGGACCGAGACAGGCCGCAAGCCCCGCAGATGTCCTCGAGGCTGAGCGGGT > NC_002947/3895939‑3896227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |