| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 307,866 | +C | intergenic (+881/‑988) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 307,865 | 1 | . | C | 94.1% | 218.1 / 7.2 | 68 | intergenic (+880/‑989) | hslO/PP_0254 | molecular chaperone HslO/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base C (30/34); total (32/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
AAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑G‑C‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAG > NC_002947/307717‑308004 | aaaGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑g < 6:370964/149‑1 (MQ=255) aGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑G‑cc > 8:136955/1‑148 (MQ=255) tGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTAc < 5:314460/149‑1 (MQ=255) tcGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGTCAGCCGAAA‑G‑G‑Gta < 5:221030/141‑2 (MQ=255) tcGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGTCAGCCGAAA‑G‑G‑Gta > 6:221030/1‑140 (MQ=255) tcGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGAt > 6:228551/1‑149 (MQ=255) ggTGCAGAACTTCCTTCTGCCGTCTGCCGATGTACTGCCTATTCACTGCGCGGCCATCATCGGCGAAGAAGGCTATGTGACCTTGTTCTTCGGCCTTTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGa < 5:205103/146‑1 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGa < 7:174206/146‑1 (MQ=255) cAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTga > 1:94428/1‑149 (MQ=255) aGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTgac < 5:172795/149‑1 (MQ=255) aGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTgac > 2:126155/1‑149 (MQ=255) gAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTgacg < 4:129229/149‑1 (MQ=255) tCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAg > 7:213318/1‑149 (MQ=255) ccTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGAcgacga < 2:94428/147‑1 (MQ=255) ctgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACgg < 4:48564/149‑1 (MQ=255) ctgccggctgccgATGTACTGACTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACgg > 2:74928/1‑149 (MQ=255) cgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAATC‑C‑GTTACCTGAACGGTGACGACGAGCACGGTAGGGGCGAAg > 6:98278/1‑149 (MQ=255) cgATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAg > 7:318369/1‑149 (MQ=255) tACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt < 7:136955/149‑1 (MQ=255) aCTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt > 7:194567/1‑148 (MQ=255) aCTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt < 8:194567/148‑1 (MQ=255) cTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGt < 5:228551/149‑1 (MQ=255) cTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGt > 4:190450/1‑149 (MQ=255) ccTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCtt < 6:251547/149‑1 (MQ=255) cTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTc < 1:126155/149‑1 (MQ=255) tATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt < 3:207223/142‑1 (MQ=255) tATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt > 4:207223/1‑142 (MQ=255) tATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTc > 6:272856/1‑148 (MQ=255) gCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACa > 7:341318/1‑149 (MQ=255) cgcgGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGa < 3:190450/147‑1 (MQ=255) tgCCAACATGGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑TGCTCTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTTTCTTCAACATGGAAggcg < 8:341318/148‑1 (MQ=255) gCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggcgg > 6:48490/1‑149 (MQ=255) ccAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCAATGGCAATACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATAGGTGACGACGAGCACCCTTGGGGCGAAGCCGTTGTCTTCAACATGGAAggcgcc > 3:231988/1‑147 (MQ=255) cAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgct < 1:74928/149‑1 (MQ=255) aaCATCGGCGAAGAAGGCTATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg < 1:145469/149‑1 (MQ=255) aaCATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg > 3:184792/1‑149 (MQ=255) aaCATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg > 3:44080/1‑149 (MQ=255) gaTCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCGTGTAC‑GGCACTGTCAAGACTACCCTTTCGGCTTACGAAT‑GCC‑GTTACATGATCGGTGACGACGATCACTGTTGGGGCGAAGGCGTTGt < 6:365713/125‑1 (MQ=255) cATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTCTCC‑GGCACTGGCAAGACAACCCTATCGGCTCAAGAAA‑GCC‑GTAACCTGATAGGTGACGACGAGCACGCTTGGGGCGAAGACGTTGt > 5:365713/1‑126 (MQ=255) aagaagGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAg < 8:213318/149‑1 (MQ=255) gCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATc > 7:119783/1‑149 (MQ=255) gATGTGACCTTGTTCTTCGGCCTGTCCGGGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGTATc > 1:22578/1‑148 (MQ=255) gATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCt < 3:286508/71‑1 (MQ=255) gATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCt > 4:286508/1‑71 (MQ=255) aTGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGTATCGAc < 2:22578/149‑1 (MQ=255) aTGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAc < 5:48490/149‑1 (MQ=255) tgtgACATTGCTCTTCTGCCTGTCC‑GGCACTTGCACTATTACCGTTTCGGCTGACGATA‑G‑CAGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCAGCGAc < 4:231988/148‑1 (MQ=255) gACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTg < 8:119783/148‑1 (MQ=255) gACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGt > 5:138607/1‑149 (MQ=255) aCCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTc > 4:171217/1‑149 (MQ=255) ccTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTcc < 5:272856/149‑1 (MQ=255) ttcGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAgaagaa > 2:343216/1‑149 (MQ=255) ttcGGCCTGCCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAgaagaa > 1:143702/1‑149 (MQ=255) cGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACTCCAAGTGCATCGACCTGTCCGAGAAGAAc < 5:98278/148‑1 (MQ=255) gCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAg > 2:48444/1‑149 (MQ=255) cTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGcc > 2:96541/1‑149 (MQ=255) tCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCg < 1:343216/147‑1 (MQ=255) c‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTc < 3:171217/148‑1 (MQ=255) cACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCt > 3:143094/1‑149 (MQ=255) cACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCt < 8:318369/149‑1 (MQ=255) cACTGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCt < 2:143702/149‑1 (MQ=255) tGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGc < 5:109959/105‑1 (MQ=255) tGGCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGc > 6:109959/1‑105 (MQ=255) gCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGaaa < 1:48444/149‑1 (MQ=255) gCAAGACTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGaaa < 4:184792/149‑1 (MQ=255) cTACCCTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc < 4:143094/149‑1 (MQ=255) cccTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCaa < 7:175039/148‑1 (MQ=255) cccTTTCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAg > 5:20185/1‑149 (MQ=255) tttCGGCTGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCAc > 7:82304/1‑149 (MQ=255) tGACGAAA‑GCC‑GTTACCTGATCGGTGACGACGAGCACGGTAGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAg > 6:177740/1‑149 (MQ=255) | AAAGCCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCC‑GGCACTGGCAAGACTACCCTTTCGGCTGACGAAA‑G‑C‑GTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACCTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAG > NC_002947/307717‑308004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |