| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,179,341 | G→A | L445L (CTG→TTG) | PP_2790 ← | sigma‑54 dependent sensory box protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,179,341 | 0 | G | A | 98.5% | 228.6 / ‑5.3 | 66 | L445L (CTG→TTG) | PP_2790 | sigma‑54 dependent sensory box protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (32/33); minor base T (0/1); total (32/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
GGAAATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAGGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCAG > NC_002947/3179197‑3179485 | ggAAATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCgt > 6:27178/1‑149 (MQ=255)ggAAATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCgt < 8:113795/149‑1 (MQ=255)ggAAATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCgt < 5:341734/149‑1 (MQ=255) ggTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGc < 4:63739/149‑1 (MQ=255) gTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGc > 6:321534/1‑148 (MQ=255) ggAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGc < 4:166995/149‑1 (MQ=255) gcgcagcGCCATGGACGATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCgg > 2:289618/7‑148 (MQ=255) gcagcGCCATGGACGATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg < 6:336517/133‑1 (MQ=255) gcagcGCCATGGACGATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAg > 5:336517/5‑137 (MQ=255) ccATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGcc > 6:359824/1‑149 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGTCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGa < 1:101265/133‑1 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGa > 2:101265/1‑133 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGcc > 4:2300/1‑148 (MQ=255) cATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGcc > 5:103785/1‑148 (MQ=255) ggCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCtcgtc > 1:110271/1‑147 (MQ=255) gcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAgg > 5:286594/1‑148 (MQ=255) gcTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGa < 3:235583/149‑1 (MQ=255) cgcAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACa < 2:110271/148‑1 (MQ=255) ggTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTg > 5:375710/1‑149 (MQ=255) gTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGc < 5:207493/149‑1 (MQ=255) tCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGcc > 8:136476/1‑149 (MQ=255) cTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCcgc < 7:152433/149‑1 (MQ=255) gtgggtggCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCcgcg < 2:177571/147‑1 (MQ=255) gtgggtggCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCcgcg < 5:221778/147‑1 (MQ=255) ggtggCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGgtgt < 5:27178/148‑1 (MQ=255) gtggCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGtgc > 4:325931/1‑149 (MQ=255) gcAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTc > 5:136974/1‑149 (MQ=255) cAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTc > 5:316605/1‑148 (MQ=255) cAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCg < 1:289618/149‑1 (MQ=255) gcgcACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGc > 2:301654/1‑149 (MQ=255) cgcACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGc < 3:2300/148‑1 (MQ=255) cACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTg < 8:156591/149‑1 (MQ=255) aCGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTgg > 3:34493/1‑149 (MQ=255) aCGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTgg > 2:225089/1‑149 (MQ=255) cGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTg > 2:314972/1‑149 (MQ=255) cAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCt > 7:151683/1‑149 (MQ=255) ggttcggtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgc < 6:136974/148‑1 (MQ=255) ttcggtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTc > 6:191140/1‑120 (MQ=255) ttcggtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTc < 5:191140/120‑1 (MQ=255) ttcggtGCTGCCCAGGCGCAGGACCTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgcg < 6:100080/147‑1 (MQ=255) ttcggtGCTGCCCAGGCGCAGGACATCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgcg > 5:100080/1‑147 (MQ=255) cggtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGa < 3:325931/148‑1 (MQ=255) cggtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGa < 5:321534/148‑1 (MQ=255) cggtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGa < 6:103785/148‑1 (MQ=255) gtGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGcc > 1:328814/1‑149 (MQ=255) tgctgcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGAGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCCAGCCg > 2:118176/1‑149 (MQ=255) gctgcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGc > 3:99915/1‑149 (MQ=255) tgcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCATGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGaa < 1:262195/88‑1 (MQ=255) tgcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGaa > 2:262195/1‑88 (MQ=255) gcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTgc < 4:294317/137‑1 (MQ=255) gcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCgagatcgga > 3:294317/1‑141 (MQ=255) gcCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTg > 2:152076/1‑148 (MQ=255) cccAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTg < 1:314972/147‑1 (MQ=255) cccAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGaa < 5:77911/149‑1 (MQ=255) ccAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGGCGAGGAACAGCGTGTCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAg < 1:289827/149‑1 (MQ=255) aGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAgg > 4:128173/1‑81 (MQ=255) aGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAgg < 3:128173/81‑1 (MQ=255) aGGACTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTc < 2:328814/149‑1 (MQ=255) aCTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTc < 1:225089/149‑1 (MQ=255) cTTCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCg < 6:286594/149‑1 (MQ=255) ttCGCGCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACAGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCg > 4:265661/1‑148 (MQ=255) cgcgCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGt < 4:99915/147‑1 (MQ=255) cgcgCTCTTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTa < 8:151683/148‑1 (MQ=255) ctTGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTGCCTCGTAGCCGaa > 5:117093/1‑148 (MQ=255) ttGCAGCACGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGaa < 8:265335/147‑1 (MQ=255) gcagcaCGCGCAGCAAGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAAt > 5:64174/1‑149 (MQ=255) cagcaaGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCa < 8:185927/149‑1 (MQ=255) agcaaGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGTCTTCCTCGTAGCCGAACAATTCACTTTCCAg > 3:314329/1‑149 (MQ=255) | GGAAATACAGGTCGGTACGGAAATCGCCATCGTCCATGGCGCTGCGCAGGTCCTTGTGGGTGGCGGCAATGATGCGCACGTCGATGGCAATCGGTTCGGTGCTGCCCAGGCGCAGGACTTCGCGCTCTTGCAGCACGCGCAGCAGGCGTGTTTGCAGCGACACCGGCATGTCGCCGATCTCGTCGAGGAACAGCGTGCCGCGGTGTGCTGCTTCGAACAGGCCTGGCTTGCCACCTTTGCGCGAGCCGCTGAAGGCGCCTTCCTCGTAGCCGAACAATTCACTTTCCAG > NC_002947/3179197‑3179485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |