| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,549,275 | Δ1 bp | 85.9% | intergenic (‑222/‑51) | rnr ← / → PP_t46 | exoribonuclease R/tRNA‑Leu |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,549,275 | 0 | T | . | 85.9% | 201.6 / 35.4 | 64 | intergenic (‑222/‑51) | rnr/PP_t46 | exoribonuclease R/tRNA‑Leu |
| Reads supporting (aligned to +/- strand): ref base T (5/4); new base . (28/27); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01 | |||||||||||
GACAGCCCCCGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTCCTGGGCACCAAATATTTTC > NC_002947/5549129‑5549421 | gcaaGCCCCCGCTGCAGTGAAAAAAACGCATAAATAGGCTGTTGGAATAAACAAGTTGAATTTTTTTAATTTTTTTTCGTTTCTGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGt < 1:103211/146‑1 (MQ=255)gACAGCCCCCGCTGCAGTTCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtt < 5:83613/148‑1 (MQ=255)gACAGCCCCCGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtt < 8:201689/148‑1 (MQ=255) cAGCCCCCGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag < 3:66612/149‑5 (MQ=255) aGCCCCCGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag > 7:116525/1‑144 (MQ=255) gCCCCCGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑Tgtagta < 5:103845/149‑1 (MQ=255) cccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag > 5:85942/1‑142 (MQ=255) cccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag > 4:168886/1‑142 (MQ=255) cccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag > 5:275879/1‑142 (MQ=255) cccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag > 6:7699/1‑142 (MQ=255) ccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGTGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTGtagtag < 5:140340/149‑1 (MQ=255) ccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag < 5:220178/145‑5 (MQ=255) ccccGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGtgtag > 6:220178/1‑141 (MQ=255) tGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAacgacg < 5:13363/149‑1 (MQ=255) cATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCt < 5:7699/149‑1 (MQ=255) aaaCAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGt > 4:326266/1‑148 (MQ=255) aCAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTaaa < 6:275879/149‑1 (MQ=255) ccgcagAAATAGGCTTGTGGTATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGTGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAg < 4:224361/147‑1 (MQ=255) agcagAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAg > 3:205484/1‑148 (MQ=255) gcagAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTaaa < 5:143183/146‑1 (MQ=255) gcagAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTaaa > 6:143183/1‑146 (MQ=255) gcagAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAATCa > 7:295125/1‑149 (MQ=255) agAAATAGGCATGTGGAATCAAAAAGTTTAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCGTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATc < 8:295125/149‑1 (MQ=255) aaaTAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCaa < 8:116525/149‑1 (MQ=255) aaTAGGCTTGTGGAATCAACAACTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAg < 4:205484/149‑1 (MQ=255) gCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAAcc > 6:122779/1‑149 (MQ=255) ttGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGGCAACCCCGAAGTTGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCt > 4:193153/1‑149 (MQ=255) gAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAAtg > 6:169300/1‑149 (MQ=255) gAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAAt < 3:326266/148‑1 (MQ=255) tCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAAtgtgt > 1:138927/1‑149 (MQ=255) aacaaGTTGAATTTTTTGAATTTTTTATCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTGTAGTAGAGATGa > 1:289465/1‑112 (MQ=255) aacaaGTTGAATTTTTTGAATTTTTTATCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTGTAGTAGAGATGa < 2:289465/112‑1 (MQ=255) acaaGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTgtagta > 4:328473/1‑104 (MQ=255) acaaGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTgtagta < 3:328473/104‑1 (MQ=255) acaaGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAg < 5:177759/124‑1 (MQ=255) acaaGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAg > 6:177759/1‑124 (MQ=255) tgaattttttTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAAtt < 6:129180/148‑1 (MQ=255) aattttttTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTgg < 3:168886/148‑1 (MQ=255) attttttTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTa < 2:138927/149‑1 (MQ=255) tCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCt > 6:108915/1‑149 (MQ=255) gAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTg > 3:91939/1‑149 (MQ=255) tGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGc < 5:130173/126‑1 (MQ=255) tGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGAAGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGc > 6:130173/1‑126 (MQ=255) ggCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAgg < 6:85942/149‑1 (MQ=255) gCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATGAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGt < 8:88614/149‑1 (MQ=255) ccTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACTCAGTAAAGCATCAAGTAAACTCTAATGTGTGCCAAGGTGGCGGAATGGGTACACGCGCTGGTTTCAGGTATCAGTGAc > 7:164274/1‑149 (MQ=38) ttGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGAt < 4:29027/61‑1 (MQ=255) ttGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGAt > 3:29027/1‑61 (MQ=255) ttGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAGTGTGTGCCCAGGTGGCGGAATTGGTAGAcg < 8:78976/124‑1 (MQ=255) ttGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAGTGTGTGCCCAGGTGGCGGAATTGGTAGAcg > 7:78976/1‑124 (MQ=255) gggAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTg > 3:128748/1‑114 (MQ=255) gggAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTg < 4:128748/114‑1 (MQ=255) ggAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAg > 7:63270/1‑149 (MQ=255) gTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGt < 3:86388/149‑1 (MQ=255) cGTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGa < 5:122779/149‑1 (MQ=255) gTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGt < 4:324279/145‑1 (MQ=255) gTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGt > 3:324279/1‑145 (MQ=255) gTATAGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTgg > 7:84728/1‑147 (MQ=255) tataGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCg > 5:235492/1‑78 (MQ=255) tataGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCg < 6:235492/78‑1 (MQ=255) tataGTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCAAGGTGGCGGAATTGGTAGACGCGCTGGATTCAGGTATCAGTGACCGCAAGGTCGTGGAAg > 1:299668/1‑149 (MQ=255) gTGCGCACCACAACGACGGGCAACCCCGAAGTTGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTc < 3:193153/149‑1 (MQ=255) gTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGt > 6:41119/1‑146 (MQ=255) gTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGt < 5:41119/146‑1 (MQ=255) gTGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTc > 4:170243/1‑148 (MQ=255) tGCGCACCACAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTc > 4:216638/1‑147 (MQ=255) accacAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGtctt > 8:149213/1‑149 (MQ=255) accacAACGACGGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGtctt < 8:63270/149‑1 (MQ=255) gacgGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCaa > 6:63052/1‑51 (MQ=255) gacgGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCaa < 5:63052/51‑1 (MQ=255) cgGACAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTCCTGGGCa > 7:10572/1‑149 (MQ=255) cAACCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTCCTGGGCACCa > 7:304895/1‑148 (MQ=255) aaCCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTcc > 7:278423/1‑138 (MQ=255) aaCCCCGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTcc < 8:278423/138‑1 (MQ=255) ccccGAAG‑TGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTCCTGGGCACCAAata > 2:86766/1‑149 (MQ=255) gTTGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTCCTGGGCACCAAATATTTTc > 3:332185/1‑148 (MQ=255) | GACAGCCCCCGCTGCAGTGCATAAACAGCAGAAATAGGCTTGTGGAATCAACAAGTTGAATTTTTTGAATTTTTTTTCGAT‑‑TGGGGGCTTTACAGCCTTGGGGAGCGTCCGTATAGTGCGCACCACAACGACGGACAACCCCGAAGTTGTAGTAGAGATGAACGACGCTGTAAAGCATCAAGTAACCTCGAATGTGTGCCCAGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTATCAGTGACCGCAAGGTCGTGGAAGTTCGAGTCTTCTCCTGGGCACCAAATATTTTC > NC_002947/5549129‑5549421 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |