New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2585	57 (1.050)	9 (0.170)	8/252	NT	13.9%	coding (1797/1896 nt)	trmF	tRNA uridine 5‑carboxymethylaminomethyl modification protein
	?	NC_002947	= 2610	56 (1.070)					coding (1772/1896 nt)	trmF	tRNA uridine 5‑carboxymethylaminomethyl modification protein

GCGCGCACCTGTGGACAACTCTTCAGCGTGTTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2436‑2585 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGGCCGCGAATTGGAGCAAAGCGCTTGAGTTCCCTGGTCACCCCTCAACA  <  NC_002947/2610‑2464                                                                                                                                                                                                                                                                                                           GCGCGCACCTGTGGACAACTCTTCAGCGTGTTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAA                                                                                                                                                        <  1:93124/147‑1                 AACTCTTCAGCGTGTTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGA                                                                                                                                      >  3:59551/1‑149                      TTCAGCGTGTTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTG                                                                                                                                 >  7:162245/1‑149                              GTTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTGGGTCAGGC                                                                                                                         <  8:162245/149‑1                               TTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCTGACCCGTCCGCAGACGCTGGGTCAGGC                                                                                                                         <  2:208735/148‑1                                  AGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTGGGTCAGGCTTC                                                                                                                      <  4:59551/148‑1                                       TGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTA                                                                                                                 >  3:34418/1‑148                                        GACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTAT                                                                                                                <  4:34418/148‑1                                                                    ATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTGGGTCAGGCT                                                                                                                        <  3:319337/112‑1                                                                    ATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCCAGACCCGTCCGCAGACGCTGGGTCAGGCT                                                                                                                        >  4:319337/1‑112                                                                                                                                                   AGCCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGGCCGCGAATTGGAGCAAAGCGCTTGAGTTCCCTGGTCACCCCTC      <  4:277168/147‑1                                                                                                                                                     CCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGGCCGCGAATTGGAGCAAAGCGCTTGAGTTCCCTG                >  5:353092/1‑135                                                                                                                                                     CCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGGCCGCGAATTGGAGCAAAGCGCTTGAGTTCCCTG                <  6:353092/135‑1                                                                                                                                                     CCAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGCCCGCGAATTGGAGCAAAGCGCTTGAGTTCCCTGGTCACCCCTCAACA  <  8:94580/149‑1                                                                                                                                                                                                                                                                                                           GCGCGCACCTGTGGACAACTCTTCAGCGTGTTGAGGGGTGACCAGGGAACTCAAGCGCTTTGCTCCAATTCGCGGCCAGCGCCGCGTTTTTTCAAGTGAATCAGCAACAGGGAAATCGCCGCCGGGGTCACACCCGGGATACGCGAAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2436‑2585 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccAGACCCGTCCGCAGACGCTGGGTCAGGCTTCGCGTATCCCGGGTGTGACCCCGGCGGCGATTTCCCTGTTGCTGATTCACTTGAAAAAACGCGGCGCTGGCCGCGAATTGGAGCAAAGCGCTTGAGTTCCCTGGTCACCCCTCAACA  <  NC_002947/2610‑2464

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.