New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 33465	53 (0.980)	6 (0.120)	5/242	NT	10.0%	coding (573/675 nt)	czcR‑I	heavy metal two‑component system response regulator
	?	NC_002947	= 33492	59 (1.170)					coding (600/675 nt)	czcR‑I	heavy metal two‑component system response regulator

GTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/33313‑33465 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcatcgatCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACATTGGTGTCGCAATCGAAATTCATATCCCAGACCAACGAGATGATCTGAGAGCGAGTCAGCGCTTCGCCCGTTCGGCTCATGAGCAGGTGCAGAAGCGCAAATTCCT  <  NC_002947/33492‑33350                                                                                                                                                                                                                                                                                                          GTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCAT                                                                                                                                                     >  5:207781/1‑149  TCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATC                                                                                                                                                    <  6:195956/149‑1      CCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGTGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGAT                                                                                                                                                 <  2:62417/148‑1      CCGCGGTGGCACACGCATCGATCTCACCACAAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGAT                                                                                                                                                 <  6:78828/148‑1                                 CACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACA                                                                                                                     >  7:111139/1‑149                                           TTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACAT                                                                                                           >  2:54319/1‑149                                             TGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACATT                                                                                                          <  1:54319/148‑1                                             TGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACATT                                                                                                          <  8:111139/148‑1                                              GCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACATTG                                                                                                         <  6:207781/148‑1                                                           TGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGGTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGATCTTCGAGCGCAAGCGACGGATGGCTACATCGATGACATTGTTGTCGCAAT                                                                                               >  3:53211/1‑145                                                                    GCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCAT                                                                                                                                                     <  5:49072/82‑1                                                                    GCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCAT                                                                                                                                                     >  6:49072/1‑82                                                                                                                                                    ATCGATCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACATTGGTGTCGCAATCGAAATTCATATCCCAGACCAACGAGATGATCTGAGAGCGAGTCAGCGCTTCGCCCGTTCGGCTCATGAGCAGGTGCAGAAGCGCAAATTCCT  >  7:195529/1‑149                                                                                                                                                                                                                                                                                                          GTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTGCTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACACCAATGTCATCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/33313‑33465 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcatcgatCTTCGAGCGCAAGCGCCGGATGGCTACATCGATGACATTGGTGTCGCAATCGAAATTCATATCCCAGACCAACGAGATGATCTGAGAGCGAGTCAGCGCTTCGCCCGTTCGGCTCATGAGCAGGTGCAGAAGCGCAAATTCCT  <  NC_002947/33492‑33350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.