| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 186554 = | 71 (1.310) | 4 (0.080) | 4/246 | NT | 5.6% | coding (363/690 nt) | PP_0163 | transcriptional regulator |
| ? | NC_002947 | 186606 = | 68 (1.330) | coding (311/690 nt) | PP_0163 | transcriptional regulator | |||||
TGTTGAAAGTGGAGATGCACAAGGGCGCCGTCGTTGCACCGCTGATCGGCGAGGATGCAGTGGACACCTATGCCCTTCGCGTATTGCTCGAGAGCGAGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/186702‑186554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCCTTGTGCATCTCCACTTTCAACAGGGATTGCGCTTCGAGCTGGCGCAGGGCTTCGCGCACGGGCATGCGACTGA > NC_002947/186606‑186753 TGTTGAAAGTGGAGATGCACAAGGGCGCCGTCGTTGCACCGCTGATCGGCGAGGATGCAGTGGACACCTATGCCCTTCGCGTATTGCTCGAGAGCGAGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCC > 1:185228/1‑149 AGCGAGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCCTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCCTTGTGCATCTCCACTTT > 7:225122/1‑149 AGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCCTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCC > 3:239358/1‑128 AGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCCTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCC < 4:239358/128‑1 CAGCGACATCGCCAGCGCCTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCCTTGTGCATCTCCACTTTCAACAGGGATTGCGCTTCGAGCTGGCGCAGGGCTTCGC < 8:225122/149‑1 CAGCGCCTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCCTTGTGCATCTCCACTTTCAACAGGGATTGCGCTTCGAGCTGGCGCAGGGCTTCGCGCACGGGCATGC < 2:247263/149‑1 CTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCCTTGTGCATCTCCACTTTCAACAGGGATTGCGCTTCGAGCTGGCGCAGGGCTTCGCGCACGGGCATGCGACTGA > 3:119834/1‑149 TGTTGAAAGTGGAGATGCACAAGGGCGCCGTCGTTGCACCGCTGATCGGCGAGGATGCAGTGGACACCTATGCCCTTCGCGTATTGCTCGAGAGCGAGGCGCTGCGCCAGTCTATCCCGCTGCTTGATGCCAGCGACATCGCCAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/186702‑186554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccTCGCTCTCGAGCAATACGCGAAGGGCATAGGTGTCCACTGCATCCTCGCCGATCAGCGGTGCAACGACGGCGCCCTTGTGCATCTCCACTTTCAACAGGGATTGCGCTTCGAGCTGGCGCAGGGCTTCGCGCACGGGCATGCGACTGA > NC_002947/186606‑186753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |