New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	307756 =	59 (1.090)	4 (0.080)	4/244	NT	6.6%	intergenic (+771/‑1098)	hslO/PP_0254	molecular chaperone HslO/hypothetical protein
	?	NC_002947	307795 =	57 (1.120)					intergenic (+810/‑1059)	hslO/PP_0254	molecular chaperone HslO/hypothetical protein

AACGCCTTCGCCCCAACCGTGCTCGTCGTCACCGATCAGGTAAC‑GCTTTCGTCAGCCGAAAGGGTAGTCTTGCCAGTGCCGGACAGGCCGAAGAACAAGGTCACATCGCCTTCTTCGCCGATGTTGGCCGCGCAGTGCATAGGCAGTACATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/307910‑307756 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatcggcGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGC  >  NC_002947/307795‑307939                                                                                                                                                                                                                                                                                                                AACGCCTTCGCCCCAACCGTGCTCGTCGTCACCGATCAGGTAACGGCTTTCGTCAGCCGAAAGGGTAGTCTTGCCAGTGCCGGACAGGCCGAAGAACAAGGTCACATCGCATTCTTAGCCGATGTTGGCCGCGCAGTCCATAGGCAGTA                                                                                                                                                           >  8:99723/1‑149      CTTCGCCCCAACCGTGCTCGTCGTCACCGATCAGGTAACGGCTTTCGTCAGCCGAAAGGGTAGTCTTGCCAGTGCCGGACAGGCCGAAGAACAAGGTCACATCGCCTTCTTCGCCGATGTTGGCCGCGCAGTGCATAGGCAGTACATCG                                                                                                                                                      >  3:176410/1‑149                                                                                                                     CGCCGATGTTGGCCGCGCAGTGCATAGGCAGTACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGA                                                           <  3:53694/129‑1                                                                                                                     CGCCGATGTTGGCCGCGCAGTGCATAGGCAGTACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGA                                                           >  4:53694/1‑129                                                                                                                      GCCGATGTTGGCCGCGCAGTGCATAGGCAGTACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCG                                       >  1:300662/1‑148                                                                                                                                            ATAGGCAGTACATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAA                <  2:300662/149‑1                                                                                                                                                       ATCGGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTA     >  4:148440/1‑149                                                                                                                                                          GGCGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGC  >  4:263643/1‑149                                                                                                                                                                                                                                                                                                                AACGCCTTCGCCCCAACCGTGCTCGTCGTCACCGATCAGGTAAC‑GCTTTCGTCAGCCGAAAGGGTAGTCTTGCCAGTGCCGGACAGGCCGAAGAACAAGGTCACATCGCCTTCTTCGCCGATGTTGGCCGCGCAGTGCATAGGCAGTACATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/307910‑307756 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatcggcGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACCCTTTCGGCTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGC  >  NC_002947/307795‑307939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.