New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 345369	54 (1.000)	4 (0.080)	4/248	NT	6.5%	coding (234/1068 nt)	mutY	A/G‑specific adenine glycosylase
	?	NC_002947	= 345427	64 (1.240)					coding (176/1068 nt)	mutY	A/G‑specific adenine glycosylase

GATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/345219‑345369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCGAATTCCCGCGCAG  <  NC_002947/345427‑345283                                                                                                                                                                                                                                                                                                          GATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGC                                                                                                                                                     >  3:147012/1‑149  ATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGC                                                                                                                                                     <  4:172864/148‑1   TGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCC                                                                                                                                                   <  7:210340/149‑1    GCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCTGCTTCCGAGGCGGGGTCTAGTAGCCATGGgggg                                                                                                                                                  >  2:137274/1‑145                                                                    CGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTT                                                                                  <  8:202812/149‑1                                                                     GCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTG                                                                                 <  4:147012/149‑1                                                                               GCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGC                                                                               <  5:34744/141‑1                                                                               GCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGC                                                                               >  6:34744/1‑141                                                                                                                                                    GCCCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCGAATTCCCGCGCAG  >  8:314203/1‑149                                                                                                                                                      CCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCTCCAAGGTCGTCGTCGAGCAACATGGCGGCGAA             <  7:293056/136‑1                                                                                                                                                      CCTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCACCAAGGTCGTCGTCGAGCAACATGGCGGCGAA             >  8:293056/1‑136                                                                                                                                                                                                                                                                                                          GATGCTGGCGATGGCGCCGGCAGTGGAGCGGCCAATGCCGGGCAGCTCGGTAAGCTGCTCGACACTGCGCGGGAATTCGCCGCCATGTTGCTCGACGACGACCTTGGCGGCCTTTTGCAGGTTGCGTGCGCGGGTGTAGTAGCCAAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/345219‑345369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcccTGCCAACGGTGCAAGCCCTGGCCGAGGCACCGGAGGACGAAGTGCTGCACCTGTGGACGGGCCTTGGCTACTACACCCGCGCACGCAACCTGCAAAAGGCCGCCAAGGTCGTCGTCGAGCAACATGGCGGCGAATTCCCGCGCAG  <  NC_002947/345427‑345283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.